Experiment: Tween 20 (C), 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS11355 and A4249_RS11360 are separated by 4 nucleotides A4249_RS11360 and A4249_RS11365 are separated by 139 nucleotides A4249_RS11365 and A4249_RS11370 are separated by 61 nucleotides A4249_RS11370 and A4249_RS11375 are separated by 231 nucleotides
A4249_RS11355: A4249_RS11355 - class I SAM-dependent methyltransferase, at 2,287,750 to 2,288,649
_RS11355
A4249_RS11360: A4249_RS11360 - undecaprenyl-diphosphate phosphatase, at 2,288,654 to 2,289,455
_RS11360
A4249_RS11365: A4249_RS11365 - cation diffusion facilitator family transporter, at 2,289,595 to 2,290,581
_RS11365
A4249_RS11370: A4249_RS11370 - glutathione S-transferase family protein, at 2,290,643 to 2,291,329
_RS11370
A4249_RS11375: A4249_RS11375 - tRNA epoxyqueuosine(34) reductase QueG, at 2,291,561 to 2,292,670
_RS11375
Position (kb)
2289
2290
2291 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2288.633 kb on + strand at 2288.633 kb on + strand at 2289.512 kb on + strand at 2289.686 kb on + strand at 2289.686 kb on + strand at 2289.686 kb on + strand at 2289.687 kb on - strand at 2289.838 kb on + strand, within A4249_RS11365 at 2289.838 kb on + strand, within A4249_RS11365 at 2289.839 kb on - strand, within A4249_RS11365 at 2289.903 kb on + strand, within A4249_RS11365 at 2289.903 kb on + strand, within A4249_RS11365 at 2289.904 kb on - strand, within A4249_RS11365 at 2289.904 kb on - strand, within A4249_RS11365 at 2290.081 kb on + strand, within A4249_RS11365 at 2290.605 kb on + strand at 2290.605 kb on + strand at 2290.640 kb on + strand at 2290.640 kb on + strand at 2290.640 kb on + strand at 2291.420 kb on + strand at 2291.420 kb on + strand at 2291.420 kb on + strand at 2291.420 kb on + strand at 2291.420 kb on + strand at 2291.420 kb on + strand at 2291.420 kb on + strand at 2291.420 kb on + strand at 2291.420 kb on + strand at 2291.420 kb on + strand at 2291.421 kb on - strand at 2291.421 kb on - strand at 2291.421 kb on - strand at 2291.421 kb on - strand at 2291.437 kb on + strand at 2291.437 kb on + strand at 2291.437 kb on + strand at 2291.437 kb on + strand at 2291.437 kb on + strand at 2291.438 kb on - strand at 2291.438 kb on - strand at 2291.438 kb on - strand at 2291.438 kb on - strand at 2291.438 kb on - strand at 2291.438 kb on - strand at 2291.438 kb on - strand at 2291.438 kb on - strand at 2291.541 kb on + strand at 2291.541 kb on + strand at 2291.541 kb on + strand at 2291.541 kb on + strand at 2291.541 kb on + strand at 2291.542 kb on - strand at 2291.542 kb on - strand at 2291.542 kb on - strand at 2291.542 kb on - strand at 2291.542 kb on - strand at 2291.548 kb on + strand at 2291.548 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C), 30C remove 2,288,633 + -0.0 2,288,633 + -0.2 2,289,512 + -0.4 2,289,686 + +1.4 2,289,686 + -0.3 2,289,686 + -0.0 2,289,687 - +2.4 2,289,838 + A4249_RS11365 0.25 +1.0 2,289,838 + A4249_RS11365 0.25 +0.1 2,289,839 - A4249_RS11365 0.25 -0.1 2,289,903 + A4249_RS11365 0.31 +1.4 2,289,903 + A4249_RS11365 0.31 +0.4 2,289,904 - A4249_RS11365 0.31 -0.6 2,289,904 - A4249_RS11365 0.31 +0.4 2,290,081 + A4249_RS11365 0.49 -0.1 2,290,605 + -0.9 2,290,605 + -1.0 2,290,640 + -0.2 2,290,640 + -0.0 2,290,640 + +0.6 2,291,420 + -0.8 2,291,420 + -0.3 2,291,420 + +0.8 2,291,420 + +0.2 2,291,420 + +0.5 2,291,420 + +0.4 2,291,420 + -0.3 2,291,420 + -0.4 2,291,420 + +0.2 2,291,420 + +0.7 2,291,421 - +0.1 2,291,421 - -0.6 2,291,421 - +0.8 2,291,421 - +0.9 2,291,437 + -1.6 2,291,437 + -0.6 2,291,437 + +1.4 2,291,437 + +0.2 2,291,437 + -0.1 2,291,438 - +0.7 2,291,438 - -1.6 2,291,438 - -1.4 2,291,438 - +1.6 2,291,438 - -0.6 2,291,438 - -0.3 2,291,438 - +1.4 2,291,438 - -1.6 2,291,541 + -0.6 2,291,541 + +1.2 2,291,541 + -1.2 2,291,541 + +2.4 2,291,541 + -0.9 2,291,542 - -0.7 2,291,542 - +0.6 2,291,542 - +1.7 2,291,542 - +3.4 2,291,542 - -0.5 2,291,548 + -0.4 2,291,548 + +0.0
Or see this region's nucleotide sequence