Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS11135

Experiment: Tween 20 (C), 30C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS11125 and A4249_RS11130 are separated by 71 nucleotidesA4249_RS11130 and A4249_RS11135 are separated by 1 nucleotidesA4249_RS11135 and A4249_RS11140 overlap by 4 nucleotides A4249_RS11125: A4249_RS11125 - glycosyltransferase family 9 protein, at 2,238,868 to 2,239,830 _RS11125 A4249_RS11130: A4249_RS11130 - alpha/beta hydrolase, at 2,239,902 to 2,240,642 _RS11130 A4249_RS11135: A4249_RS11135 - N-carbamoylputrescine amidase, at 2,240,644 to 2,241,507 _RS11135 A4249_RS11140: A4249_RS11140 - agmatine deiminase family protein, at 2,241,504 to 2,242,523 _RS11140 Position (kb) 2240 2241 2242Strain fitness (log2 ratio) -2 -1 0 1at 2240.077 kb on - strand, within A4249_RS11130at 2240.385 kb on + strand, within A4249_RS11130at 2240.385 kb on + strand, within A4249_RS11130at 2240.385 kb on + strand, within A4249_RS11130at 2240.385 kb on + strand, within A4249_RS11130at 2240.385 kb on + strand, within A4249_RS11130at 2240.385 kb on + strand, within A4249_RS11130at 2240.385 kb on + strand, within A4249_RS11130at 2240.385 kb on + strand, within A4249_RS11130at 2240.385 kb on + strand, within A4249_RS11130at 2240.385 kb on + strand, within A4249_RS11130at 2240.385 kb on + strand, within A4249_RS11130at 2240.385 kb on + strand, within A4249_RS11130at 2240.386 kb on - strand, within A4249_RS11130at 2240.386 kb on - strand, within A4249_RS11130at 2240.386 kb on - strand, within A4249_RS11130at 2240.386 kb on - strand, within A4249_RS11130at 2240.386 kb on - strand, within A4249_RS11130at 2240.386 kb on - strand, within A4249_RS11130at 2240.386 kb on - strand, within A4249_RS11130at 2240.386 kb on - strand, within A4249_RS11130at 2240.386 kb on - strand, within A4249_RS11130at 2240.640 kb on + strandat 2240.640 kb on + strandat 2240.641 kb on - strandat 2240.641 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Tween 20 (C), 30C
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2,240,077 - A4249_RS11130 0.24 -2.2
2,240,385 + A4249_RS11130 0.65 +0.0
2,240,385 + A4249_RS11130 0.65 -0.2
2,240,385 + A4249_RS11130 0.65 +1.3
2,240,385 + A4249_RS11130 0.65 -0.7
2,240,385 + A4249_RS11130 0.65 -0.1
2,240,385 + A4249_RS11130 0.65 -0.2
2,240,385 + A4249_RS11130 0.65 +0.3
2,240,385 + A4249_RS11130 0.65 +0.3
2,240,385 + A4249_RS11130 0.65 +0.2
2,240,385 + A4249_RS11130 0.65 -0.2
2,240,385 + A4249_RS11130 0.65 -0.6
2,240,385 + A4249_RS11130 0.65 +0.3
2,240,386 - A4249_RS11130 0.65 -0.1
2,240,386 - A4249_RS11130 0.65 +0.1
2,240,386 - A4249_RS11130 0.65 -0.4
2,240,386 - A4249_RS11130 0.65 -0.0
2,240,386 - A4249_RS11130 0.65 -0.3
2,240,386 - A4249_RS11130 0.65 +0.2
2,240,386 - A4249_RS11130 0.65 +1.1
2,240,386 - A4249_RS11130 0.65 +0.2
2,240,386 - A4249_RS11130 0.65 +0.1
2,240,640 + +0.1
2,240,640 + +0.0
2,240,641 - +0.9
2,240,641 - -0.2

Or see this region's nucleotide sequence