Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS09190

Experiment: Tween 20 (C), 30C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS09185 and A4249_RS09190 are separated by 3 nucleotidesA4249_RS09190 and A4249_RS09195 are separated by 39 nucleotides A4249_RS09185: A4249_RS09185 - M14 family metallopeptidase, at 1,838,929 to 1,840,698 _RS09185 A4249_RS09190: A4249_RS09190 - MAPEG family protein, at 1,840,702 to 1,841,109 _RS09190 A4249_RS09195: A4249_RS09195 - TldD/PmbA family protein, at 1,841,149 to 1,842,504 _RS09195 Position (kb) 1840 1841 1842Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1839.708 kb on + strand, within A4249_RS09185at 1839.708 kb on + strand, within A4249_RS09185at 1839.750 kb on + strand, within A4249_RS09185at 1839.750 kb on + strand, within A4249_RS09185at 1839.750 kb on + strand, within A4249_RS09185at 1839.750 kb on + strand, within A4249_RS09185at 1839.750 kb on + strand, within A4249_RS09185at 1839.750 kb on + strand, within A4249_RS09185at 1839.750 kb on + strand, within A4249_RS09185at 1839.750 kb on + strand, within A4249_RS09185at 1839.750 kb on + strand, within A4249_RS09185at 1839.750 kb on + strand, within A4249_RS09185at 1839.750 kb on + strand, within A4249_RS09185at 1839.751 kb on - strand, within A4249_RS09185at 1839.751 kb on - strand, within A4249_RS09185at 1839.751 kb on - strand, within A4249_RS09185at 1839.751 kb on - strand, within A4249_RS09185at 1839.751 kb on - strand, within A4249_RS09185at 1839.751 kb on - strand, within A4249_RS09185at 1839.751 kb on - strand, within A4249_RS09185at 1839.751 kb on - strand, within A4249_RS09185at 1839.751 kb on - strand, within A4249_RS09185at 1839.880 kb on + strand, within A4249_RS09185at 1839.880 kb on + strand, within A4249_RS09185at 1839.880 kb on + strand, within A4249_RS09185at 1839.880 kb on + strand, within A4249_RS09185at 1839.880 kb on + strand, within A4249_RS09185at 1839.880 kb on + strand, within A4249_RS09185at 1839.880 kb on + strand, within A4249_RS09185at 1839.880 kb on + strand, within A4249_RS09185at 1839.880 kb on + strand, within A4249_RS09185at 1839.880 kb on + strand, within A4249_RS09185at 1839.880 kb on + strand, within A4249_RS09185at 1839.881 kb on - strand, within A4249_RS09185at 1839.881 kb on - strand, within A4249_RS09185at 1839.881 kb on - strand, within A4249_RS09185at 1839.881 kb on - strand, within A4249_RS09185at 1839.881 kb on - strand, within A4249_RS09185at 1839.881 kb on - strand, within A4249_RS09185at 1839.881 kb on - strand, within A4249_RS09185at 1839.881 kb on - strand, within A4249_RS09185at 1839.881 kb on - strand, within A4249_RS09185at 1839.881 kb on - strand, within A4249_RS09185at 1839.881 kb on - strand, within A4249_RS09185at 1839.881 kb on - strand, within A4249_RS09185at 1839.881 kb on - strand, within A4249_RS09185at 1839.881 kb on - strand, within A4249_RS09185at 1839.881 kb on - strand, within A4249_RS09185at 1839.881 kb on - strand, within A4249_RS09185at 1839.881 kb on - strand, within A4249_RS09185at 1840.040 kb on - strand, within A4249_RS09185at 1840.040 kb on - strand, within A4249_RS09185at 1840.048 kb on + strand, within A4249_RS09185at 1840.048 kb on + strand, within A4249_RS09185at 1840.048 kb on + strand, within A4249_RS09185at 1840.048 kb on + strand, within A4249_RS09185at 1840.048 kb on + strand, within A4249_RS09185at 1840.048 kb on + strand, within A4249_RS09185at 1840.048 kb on + strand, within A4249_RS09185at 1840.048 kb on + strand, within A4249_RS09185at 1840.049 kb on - strand, within A4249_RS09185at 1840.049 kb on - strand, within A4249_RS09185at 1840.049 kb on - strand, within A4249_RS09185at 1840.049 kb on - strand, within A4249_RS09185at 1840.049 kb on - strand, within A4249_RS09185at 1840.049 kb on - strand, within A4249_RS09185at 1840.049 kb on - strand, within A4249_RS09185at 1840.049 kb on - strand, within A4249_RS09185at 1840.049 kb on - strand, within A4249_RS09185at 1840.049 kb on - strand, within A4249_RS09185at 1840.049 kb on - strand, within A4249_RS09185at 1840.049 kb on - strand, within A4249_RS09185at 1840.126 kb on + strand, within A4249_RS09185at 1840.126 kb on + strand, within A4249_RS09185at 1840.126 kb on + strand, within A4249_RS09185at 1840.126 kb on + strand, within A4249_RS09185at 1840.126 kb on + strand, within A4249_RS09185at 1840.126 kb on + strand, within A4249_RS09185at 1840.126 kb on + strand, within A4249_RS09185at 1840.126 kb on + strand, within A4249_RS09185at 1840.126 kb on + strand, within A4249_RS09185at 1840.127 kb on - strand, within A4249_RS09185at 1840.127 kb on - strand, within A4249_RS09185at 1840.127 kb on - strand, within A4249_RS09185at 1840.127 kb on - strand, within A4249_RS09185at 1840.127 kb on - strand, within A4249_RS09185at 1840.127 kb on - strand, within A4249_RS09185at 1840.127 kb on - strand, within A4249_RS09185at 1840.127 kb on - strand, within A4249_RS09185at 1840.127 kb on - strand, within A4249_RS09185at 1840.127 kb on - strand, within A4249_RS09185at 1840.127 kb on - strand, within A4249_RS09185at 1840.168 kb on + strand, within A4249_RS09185at 1840.168 kb on + strand, within A4249_RS09185at 1840.366 kb on + strand, within A4249_RS09185at 1840.498 kb on + strand, within A4249_RS09185at 1840.498 kb on + strand, within A4249_RS09185at 1840.498 kb on + strand, within A4249_RS09185at 1840.498 kb on + strand, within A4249_RS09185at 1840.498 kb on + strand, within A4249_RS09185at 1840.498 kb on + strand, within A4249_RS09185at 1840.498 kb on + strand, within A4249_RS09185at 1840.499 kb on - strand, within A4249_RS09185at 1840.499 kb on - strand, within A4249_RS09185at 1840.499 kb on - strand, within A4249_RS09185at 1840.499 kb on - strand, within A4249_RS09185at 1840.499 kb on - strand, within A4249_RS09185at 1840.500 kb on + strand, within A4249_RS09185at 1840.500 kb on + strand, within A4249_RS09185at 1840.500 kb on + strand, within A4249_RS09185at 1840.500 kb on + strand, within A4249_RS09185at 1840.501 kb on - strand, within A4249_RS09185at 1840.501 kb on - strand, within A4249_RS09185at 1840.501 kb on - strand, within A4249_RS09185at 1840.501 kb on - strand, within A4249_RS09185at 1840.501 kb on - strand, within A4249_RS09185at 1840.501 kb on - strand, within A4249_RS09185at 1840.501 kb on - strand, within A4249_RS09185at 1840.510 kb on + strand, within A4249_RS09185at 1840.510 kb on + strand, within A4249_RS09185at 1840.510 kb on + strand, within A4249_RS09185at 1840.510 kb on + strand, within A4249_RS09185at 1840.636 kb on + strandat 1840.636 kb on + strandat 1840.636 kb on + strandat 1840.636 kb on + strandat 1840.636 kb on + strandat 1840.636 kb on + strandat 1840.654 kb on + strandat 1840.654 kb on + strandat 1840.654 kb on + strandat 1840.654 kb on + strandat 1840.655 kb on - strandat 1840.655 kb on - strandat 1840.655 kb on - strandat 1840.655 kb on - strandat 1840.655 kb on - strandat 1840.655 kb on - strandat 1840.655 kb on - strandat 1840.666 kb on + strandat 1840.666 kb on + strandat 1840.666 kb on + strandat 1840.666 kb on + strandat 1840.666 kb on + strandat 1840.666 kb on + strandat 1840.667 kb on - strandat 1840.676 kb on - strandat 1840.720 kb on + strandat 1840.721 kb on - strandat 1840.721 kb on - strandat 1840.721 kb on - strandat 1840.721 kb on - strandat 1840.721 kb on - strandat 1840.721 kb on - strandat 1840.885 kb on + strand, within A4249_RS09190at 1840.885 kb on + strand, within A4249_RS09190at 1840.885 kb on + strand, within A4249_RS09190at 1840.885 kb on + strand, within A4249_RS09190at 1840.886 kb on - strand, within A4249_RS09190at 1840.886 kb on - strand, within A4249_RS09190at 1840.886 kb on - strand, within A4249_RS09190at 1840.886 kb on - strand, within A4249_RS09190at 1840.886 kb on - strand, within A4249_RS09190at 1840.886 kb on - strand, within A4249_RS09190at 1840.886 kb on - strand, within A4249_RS09190at 1841.671 kb on + strand, within A4249_RS09195at 1841.671 kb on + strand, within A4249_RS09195at 1841.671 kb on + strand, within A4249_RS09195at 1841.671 kb on + strand, within A4249_RS09195at 1841.672 kb on - strand, within A4249_RS09195at 1841.672 kb on - strand, within A4249_RS09195

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Per-strain Table

Position Strand Gene LocusTag Fraction Tween 20 (C), 30C
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1,839,708 + A4249_RS09185 0.44 -1.2
1,839,708 + A4249_RS09185 0.44 -1.7
1,839,750 + A4249_RS09185 0.46 -1.9
1,839,750 + A4249_RS09185 0.46 +0.3
1,839,750 + A4249_RS09185 0.46 +1.3
1,839,750 + A4249_RS09185 0.46 +0.1
1,839,750 + A4249_RS09185 0.46 +0.3
1,839,750 + A4249_RS09185 0.46 +0.2
1,839,750 + A4249_RS09185 0.46 +0.1
1,839,750 + A4249_RS09185 0.46 -0.2
1,839,750 + A4249_RS09185 0.46 +0.9
1,839,750 + A4249_RS09185 0.46 +0.6
1,839,750 + A4249_RS09185 0.46 +0.8
1,839,751 - A4249_RS09185 0.46 -0.3
1,839,751 - A4249_RS09185 0.46 -1.8
1,839,751 - A4249_RS09185 0.46 -0.7
1,839,751 - A4249_RS09185 0.46 -0.3
1,839,751 - A4249_RS09185 0.46 -0.3
1,839,751 - A4249_RS09185 0.46 -0.4
1,839,751 - A4249_RS09185 0.46 +0.1
1,839,751 - A4249_RS09185 0.46 -1.5
1,839,751 - A4249_RS09185 0.46 +2.8
1,839,880 + A4249_RS09185 0.54 +0.3
1,839,880 + A4249_RS09185 0.54 -1.0
1,839,880 + A4249_RS09185 0.54 -0.4
1,839,880 + A4249_RS09185 0.54 -0.3
1,839,880 + A4249_RS09185 0.54 +1.1
1,839,880 + A4249_RS09185 0.54 +0.3
1,839,880 + A4249_RS09185 0.54 -0.2
1,839,880 + A4249_RS09185 0.54 +0.5
1,839,880 + A4249_RS09185 0.54 +1.3
1,839,880 + A4249_RS09185 0.54 -0.7
1,839,880 + A4249_RS09185 0.54 +0.1
1,839,881 - A4249_RS09185 0.54 +1.1
1,839,881 - A4249_RS09185 0.54 +1.2
1,839,881 - A4249_RS09185 0.54 -0.2
1,839,881 - A4249_RS09185 0.54 -0.6
1,839,881 - A4249_RS09185 0.54 -0.7
1,839,881 - A4249_RS09185 0.54 +0.0
1,839,881 - A4249_RS09185 0.54 -0.3
1,839,881 - A4249_RS09185 0.54 -3.2
1,839,881 - A4249_RS09185 0.54 -0.1
1,839,881 - A4249_RS09185 0.54 -0.1
1,839,881 - A4249_RS09185 0.54 +1.9
1,839,881 - A4249_RS09185 0.54 +0.6
1,839,881 - A4249_RS09185 0.54 +2.8
1,839,881 - A4249_RS09185 0.54 -0.6
1,839,881 - A4249_RS09185 0.54 +0.3
1,839,881 - A4249_RS09185 0.54 -0.3
1,839,881 - A4249_RS09185 0.54 +0.8
1,840,040 - A4249_RS09185 0.63 -1.2
1,840,040 - A4249_RS09185 0.63 -1.3
1,840,048 + A4249_RS09185 0.63 +0.2
1,840,048 + A4249_RS09185 0.63 -1.2
1,840,048 + A4249_RS09185 0.63 +0.7
1,840,048 + A4249_RS09185 0.63 -0.3
1,840,048 + A4249_RS09185 0.63 -0.8
1,840,048 + A4249_RS09185 0.63 +0.3
1,840,048 + A4249_RS09185 0.63 -0.7
1,840,048 + A4249_RS09185 0.63 +0.0
1,840,049 - A4249_RS09185 0.63 -0.7
1,840,049 - A4249_RS09185 0.63 -0.2
1,840,049 - A4249_RS09185 0.63 +0.6
1,840,049 - A4249_RS09185 0.63 +0.3
1,840,049 - A4249_RS09185 0.63 -0.3
1,840,049 - A4249_RS09185 0.63 +0.3
1,840,049 - A4249_RS09185 0.63 -1.9
1,840,049 - A4249_RS09185 0.63 +0.4
1,840,049 - A4249_RS09185 0.63 +0.1
1,840,049 - A4249_RS09185 0.63 +0.5
1,840,049 - A4249_RS09185 0.63 +0.8
1,840,049 - A4249_RS09185 0.63 +0.8
1,840,126 + A4249_RS09185 0.68 +0.5
1,840,126 + A4249_RS09185 0.68 +0.3
1,840,126 + A4249_RS09185 0.68 +1.1
1,840,126 + A4249_RS09185 0.68 +0.6
1,840,126 + A4249_RS09185 0.68 -0.1
1,840,126 + A4249_RS09185 0.68 -0.1
1,840,126 + A4249_RS09185 0.68 +0.6
1,840,126 + A4249_RS09185 0.68 -1.0
1,840,126 + A4249_RS09185 0.68 +0.7
1,840,127 - A4249_RS09185 0.68 +0.7
1,840,127 - A4249_RS09185 0.68 +0.2
1,840,127 - A4249_RS09185 0.68 -1.3
1,840,127 - A4249_RS09185 0.68 -0.6
1,840,127 - A4249_RS09185 0.68 -0.2
1,840,127 - A4249_RS09185 0.68 +0.6
1,840,127 - A4249_RS09185 0.68 -0.7
1,840,127 - A4249_RS09185 0.68 +0.3
1,840,127 - A4249_RS09185 0.68 -0.9
1,840,127 - A4249_RS09185 0.68 -2.1
1,840,127 - A4249_RS09185 0.68 -0.5
1,840,168 + A4249_RS09185 0.70 -1.0
1,840,168 + A4249_RS09185 0.70 -0.6
1,840,366 + A4249_RS09185 0.81 -0.9
1,840,498 + A4249_RS09185 0.89 -2.1
1,840,498 + A4249_RS09185 0.89 +0.0
1,840,498 + A4249_RS09185 0.89 +0.3
1,840,498 + A4249_RS09185 0.89 -0.9
1,840,498 + A4249_RS09185 0.89 -0.6
1,840,498 + A4249_RS09185 0.89 -0.1
1,840,498 + A4249_RS09185 0.89 -0.7
1,840,499 - A4249_RS09185 0.89 -1.5
1,840,499 - A4249_RS09185 0.89 +0.3
1,840,499 - A4249_RS09185 0.89 +0.1
1,840,499 - A4249_RS09185 0.89 +0.9
1,840,499 - A4249_RS09185 0.89 +0.5
1,840,500 + A4249_RS09185 0.89 -1.0
1,840,500 + A4249_RS09185 0.89 +0.5
1,840,500 + A4249_RS09185 0.89 -0.7
1,840,500 + A4249_RS09185 0.89 -0.3
1,840,501 - A4249_RS09185 0.89 -0.1
1,840,501 - A4249_RS09185 0.89 -2.1
1,840,501 - A4249_RS09185 0.89 +1.4
1,840,501 - A4249_RS09185 0.89 +0.2
1,840,501 - A4249_RS09185 0.89 -0.0
1,840,501 - A4249_RS09185 0.89 -0.7
1,840,501 - A4249_RS09185 0.89 +0.3
1,840,510 + A4249_RS09185 0.89 -0.6
1,840,510 + A4249_RS09185 0.89 +0.0
1,840,510 + A4249_RS09185 0.89 +2.1
1,840,510 + A4249_RS09185 0.89 -1.7
1,840,636 + -1.7
1,840,636 + -0.2
1,840,636 + +0.8
1,840,636 + -1.5
1,840,636 + -0.4
1,840,636 + +2.3
1,840,654 + +0.3
1,840,654 + -0.9
1,840,654 + -0.3
1,840,654 + +0.3
1,840,655 - -0.7
1,840,655 - +0.1
1,840,655 - +0.8
1,840,655 - -0.7
1,840,655 - +0.4
1,840,655 - -1.3
1,840,655 - -0.1
1,840,666 + -0.7
1,840,666 + +0.1
1,840,666 + +0.1
1,840,666 + -2.7
1,840,666 + +0.4
1,840,666 + +0.5
1,840,667 - -0.1
1,840,676 - -0.3
1,840,720 + +0.3
1,840,721 - -0.1
1,840,721 - +0.3
1,840,721 - +1.3
1,840,721 - +0.7
1,840,721 - -0.7
1,840,721 - +1.1
1,840,885 + A4249_RS09190 0.45 -0.6
1,840,885 + A4249_RS09190 0.45 -0.5
1,840,885 + A4249_RS09190 0.45 -0.6
1,840,885 + A4249_RS09190 0.45 +0.4
1,840,886 - A4249_RS09190 0.45 +0.6
1,840,886 - A4249_RS09190 0.45 -0.6
1,840,886 - A4249_RS09190 0.45 -1.2
1,840,886 - A4249_RS09190 0.45 +0.7
1,840,886 - A4249_RS09190 0.45 +0.1
1,840,886 - A4249_RS09190 0.45 -1.1
1,840,886 - A4249_RS09190 0.45 +0.1
1,841,671 + A4249_RS09195 0.38 +0.7
1,841,671 + A4249_RS09195 0.38 -1.7
1,841,671 + A4249_RS09195 0.38 +1.9
1,841,671 + A4249_RS09195 0.38 +0.2
1,841,672 - A4249_RS09195 0.39 +0.0
1,841,672 - A4249_RS09195 0.39 -1.0

Or see this region's nucleotide sequence