Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS06610

Experiment: Tween 20 (C), 30C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS06605 and A4249_RS06610 overlap by 4 nucleotidesA4249_RS06610 and A4249_RS06615 overlap by 4 nucleotides A4249_RS06605: A4249_RS06605 - imidazolonepropionase, at 1,344,156 to 1,345,343 _RS06605 A4249_RS06610: A4249_RS06610 - histidine utilization repressor, at 1,345,340 to 1,346,065 _RS06610 A4249_RS06615: A4249_RS06615 - formimidoylglutamate deiminase, at 1,346,062 to 1,347,438 _RS06615 Position (kb) 1345 1346 1347Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 1344.478 kb on + strand, within A4249_RS06605at 1344.479 kb on - strand, within A4249_RS06605at 1344.479 kb on - strand, within A4249_RS06605at 1344.479 kb on - strand, within A4249_RS06605at 1344.645 kb on + strand, within A4249_RS06605at 1344.645 kb on + strand, within A4249_RS06605at 1344.645 kb on + strand, within A4249_RS06605at 1344.645 kb on + strand, within A4249_RS06605at 1344.646 kb on - strand, within A4249_RS06605at 1344.646 kb on - strand, within A4249_RS06605at 1344.646 kb on - strand, within A4249_RS06605at 1344.646 kb on - strand, within A4249_RS06605at 1344.646 kb on - strand, within A4249_RS06605at 1344.646 kb on - strand, within A4249_RS06605at 1344.646 kb on - strand, within A4249_RS06605at 1344.709 kb on + strand, within A4249_RS06605at 1344.709 kb on + strand, within A4249_RS06605at 1344.709 kb on + strand, within A4249_RS06605at 1344.709 kb on + strand, within A4249_RS06605at 1344.709 kb on + strand, within A4249_RS06605at 1344.709 kb on + strand, within A4249_RS06605at 1344.710 kb on - strand, within A4249_RS06605at 1344.710 kb on - strand, within A4249_RS06605at 1344.710 kb on - strand, within A4249_RS06605at 1344.781 kb on + strand, within A4249_RS06605at 1344.781 kb on + strand, within A4249_RS06605at 1344.781 kb on + strand, within A4249_RS06605at 1344.781 kb on + strand, within A4249_RS06605at 1344.781 kb on + strand, within A4249_RS06605at 1344.781 kb on + strand, within A4249_RS06605at 1344.781 kb on + strand, within A4249_RS06605at 1344.781 kb on + strand, within A4249_RS06605at 1344.781 kb on + strand, within A4249_RS06605at 1344.781 kb on + strand, within A4249_RS06605at 1344.781 kb on + strand, within A4249_RS06605at 1344.782 kb on - strand, within A4249_RS06605at 1344.782 kb on - strand, within A4249_RS06605at 1344.782 kb on - strand, within A4249_RS06605at 1344.782 kb on - strand, within A4249_RS06605at 1344.802 kb on + strand, within A4249_RS06605at 1344.832 kb on + strand, within A4249_RS06605at 1344.832 kb on + strand, within A4249_RS06605at 1344.832 kb on + strand, within A4249_RS06605at 1344.832 kb on + strand, within A4249_RS06605at 1344.833 kb on - strand, within A4249_RS06605at 1344.833 kb on - strand, within A4249_RS06605at 1344.833 kb on - strand, within A4249_RS06605at 1344.833 kb on - strand, within A4249_RS06605at 1344.840 kb on - strand, within A4249_RS06605at 1344.920 kb on - strand, within A4249_RS06605at 1344.920 kb on - strand, within A4249_RS06605at 1345.069 kb on + strand, within A4249_RS06605at 1345.069 kb on + strand, within A4249_RS06605at 1345.069 kb on + strand, within A4249_RS06605at 1345.069 kb on + strand, within A4249_RS06605at 1345.069 kb on + strand, within A4249_RS06605at 1345.069 kb on + strand, within A4249_RS06605at 1345.069 kb on + strand, within A4249_RS06605at 1345.069 kb on + strand, within A4249_RS06605at 1345.069 kb on + strand, within A4249_RS06605at 1345.069 kb on + strand, within A4249_RS06605at 1345.070 kb on - strand, within A4249_RS06605at 1345.070 kb on - strand, within A4249_RS06605at 1345.070 kb on - strand, within A4249_RS06605at 1345.070 kb on - strand, within A4249_RS06605at 1345.280 kb on - strandat 1345.280 kb on - strandat 1345.280 kb on - strandat 1345.508 kb on + strand, within A4249_RS06610at 1345.508 kb on + strand, within A4249_RS06610at 1345.508 kb on + strand, within A4249_RS06610at 1345.509 kb on - strand, within A4249_RS06610at 1345.509 kb on - strand, within A4249_RS06610at 1345.509 kb on - strand, within A4249_RS06610at 1345.509 kb on - strand, within A4249_RS06610at 1345.606 kb on + strand, within A4249_RS06610at 1345.606 kb on + strand, within A4249_RS06610at 1345.606 kb on + strand, within A4249_RS06610at 1345.607 kb on - strand, within A4249_RS06610at 1345.607 kb on - strand, within A4249_RS06610at 1345.622 kb on + strand, within A4249_RS06610at 1345.623 kb on - strand, within A4249_RS06610at 1345.623 kb on - strand, within A4249_RS06610at 1345.623 kb on - strand, within A4249_RS06610at 1345.705 kb on + strand, within A4249_RS06610at 1345.705 kb on + strand, within A4249_RS06610at 1345.706 kb on - strand, within A4249_RS06610at 1345.785 kb on + strand, within A4249_RS06610at 1345.785 kb on + strand, within A4249_RS06610at 1345.786 kb on - strand, within A4249_RS06610at 1345.786 kb on - strand, within A4249_RS06610at 1345.786 kb on - strand, within A4249_RS06610at 1345.786 kb on - strand, within A4249_RS06610at 1345.786 kb on - strand, within A4249_RS06610at 1345.786 kb on - strand, within A4249_RS06610at 1345.786 kb on - strand, within A4249_RS06610at 1345.791 kb on + strand, within A4249_RS06610at 1345.792 kb on - strand, within A4249_RS06610at 1345.792 kb on - strand, within A4249_RS06610at 1345.834 kb on + strand, within A4249_RS06610at 1345.834 kb on + strand, within A4249_RS06610at 1345.835 kb on - strand, within A4249_RS06610at 1346.023 kb on + strandat 1346.023 kb on + strandat 1346.023 kb on + strandat 1346.023 kb on + strandat 1346.023 kb on + strandat 1346.024 kb on - strandat 1346.024 kb on - strandat 1346.024 kb on - strandat 1346.043 kb on + strandat 1346.043 kb on + strandat 1346.043 kb on + strandat 1346.043 kb on + strandat 1346.043 kb on + strandat 1346.044 kb on - strandat 1346.044 kb on - strandat 1346.044 kb on - strandat 1346.044 kb on - strandat 1346.044 kb on - strandat 1346.044 kb on - strandat 1346.044 kb on - strandat 1346.044 kb on - strandat 1346.044 kb on - strandat 1346.044 kb on - strandat 1346.057 kb on + strandat 1346.057 kb on + strandat 1346.057 kb on + strandat 1346.057 kb on + strandat 1346.057 kb on + strandat 1346.057 kb on + strandat 1346.057 kb on + strandat 1346.057 kb on + strandat 1346.057 kb on + strandat 1346.057 kb on + strandat 1346.057 kb on + strandat 1346.057 kb on + strandat 1346.057 kb on + strandat 1346.058 kb on - strandat 1346.058 kb on - strandat 1346.058 kb on - strandat 1346.058 kb on - strandat 1346.058 kb on - strandat 1346.058 kb on - strandat 1346.058 kb on - strandat 1346.250 kb on + strand, within A4249_RS06615at 1346.250 kb on + strand, within A4249_RS06615at 1346.251 kb on - strand, within A4249_RS06615at 1346.251 kb on - strand, within A4249_RS06615at 1346.251 kb on - strand, within A4249_RS06615at 1346.260 kb on + strand, within A4249_RS06615at 1346.260 kb on + strand, within A4249_RS06615at 1346.261 kb on - strand, within A4249_RS06615at 1346.261 kb on - strand, within A4249_RS06615at 1346.286 kb on + strand, within A4249_RS06615at 1346.287 kb on - strand, within A4249_RS06615at 1346.341 kb on + strand, within A4249_RS06615at 1346.341 kb on + strand, within A4249_RS06615at 1346.342 kb on - strand, within A4249_RS06615at 1346.342 kb on - strand, within A4249_RS06615at 1346.342 kb on - strand, within A4249_RS06615at 1346.411 kb on + strand, within A4249_RS06615at 1346.412 kb on - strand, within A4249_RS06615at 1346.412 kb on - strand, within A4249_RS06615at 1346.614 kb on + strand, within A4249_RS06615at 1346.614 kb on + strand, within A4249_RS06615at 1346.614 kb on + strand, within A4249_RS06615at 1346.614 kb on + strand, within A4249_RS06615at 1346.614 kb on + strand, within A4249_RS06615at 1346.614 kb on + strand, within A4249_RS06615at 1346.614 kb on + strand, within A4249_RS06615at 1346.614 kb on + strand, within A4249_RS06615at 1346.614 kb on + strand, within A4249_RS06615at 1346.614 kb on + strand, within A4249_RS06615at 1346.615 kb on - strand, within A4249_RS06615at 1346.615 kb on - strand, within A4249_RS06615at 1346.615 kb on - strand, within A4249_RS06615at 1346.615 kb on - strand, within A4249_RS06615at 1346.615 kb on - strand, within A4249_RS06615at 1346.615 kb on - strand, within A4249_RS06615at 1346.725 kb on + strand, within A4249_RS06615at 1346.942 kb on + strand, within A4249_RS06615at 1346.942 kb on + strand, within A4249_RS06615at 1346.942 kb on + strand, within A4249_RS06615at 1346.942 kb on + strand, within A4249_RS06615at 1346.942 kb on + strand, within A4249_RS06615at 1346.942 kb on + strand, within A4249_RS06615at 1346.942 kb on + strand, within A4249_RS06615at 1346.942 kb on + strand, within A4249_RS06615at 1346.943 kb on - strand, within A4249_RS06615at 1346.943 kb on - strand, within A4249_RS06615at 1346.943 kb on - strand, within A4249_RS06615at 1346.943 kb on - strand, within A4249_RS06615at 1346.943 kb on - strand, within A4249_RS06615at 1346.943 kb on - strand, within A4249_RS06615at 1346.943 kb on - strand, within A4249_RS06615at 1346.943 kb on - strand, within A4249_RS06615at 1346.943 kb on - strand, within A4249_RS06615at 1347.026 kb on + strand, within A4249_RS06615at 1347.027 kb on - strand, within A4249_RS06615at 1347.027 kb on - strand, within A4249_RS06615at 1347.056 kb on + strand, within A4249_RS06615at 1347.057 kb on - strand, within A4249_RS06615at 1347.057 kb on - strand, within A4249_RS06615at 1347.057 kb on - strand, within A4249_RS06615

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Per-strain Table

Position Strand Gene LocusTag Fraction Tween 20 (C), 30C
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1,344,478 + A4249_RS06605 0.27 -0.1
1,344,479 - A4249_RS06605 0.27 +0.2
1,344,479 - A4249_RS06605 0.27 -0.0
1,344,479 - A4249_RS06605 0.27 +0.2
1,344,645 + A4249_RS06605 0.41 +2.4
1,344,645 + A4249_RS06605 0.41 -0.6
1,344,645 + A4249_RS06605 0.41 +1.2
1,344,645 + A4249_RS06605 0.41 +0.1
1,344,646 - A4249_RS06605 0.41 +1.4
1,344,646 - A4249_RS06605 0.41 +0.5
1,344,646 - A4249_RS06605 0.41 +0.1
1,344,646 - A4249_RS06605 0.41 +0.2
1,344,646 - A4249_RS06605 0.41 +0.7
1,344,646 - A4249_RS06605 0.41 -0.8
1,344,646 - A4249_RS06605 0.41 -1.8
1,344,709 + A4249_RS06605 0.47 -2.6
1,344,709 + A4249_RS06605 0.47 +1.2
1,344,709 + A4249_RS06605 0.47 +0.8
1,344,709 + A4249_RS06605 0.47 -0.2
1,344,709 + A4249_RS06605 0.47 +4.3
1,344,709 + A4249_RS06605 0.47 -0.4
1,344,710 - A4249_RS06605 0.47 +0.7
1,344,710 - A4249_RS06605 0.47 -0.6
1,344,710 - A4249_RS06605 0.47 +0.0
1,344,781 + A4249_RS06605 0.53 -0.1
1,344,781 + A4249_RS06605 0.53 +2.0
1,344,781 + A4249_RS06605 0.53 +2.2
1,344,781 + A4249_RS06605 0.53 -0.1
1,344,781 + A4249_RS06605 0.53 -0.9
1,344,781 + A4249_RS06605 0.53 -0.1
1,344,781 + A4249_RS06605 0.53 -0.0
1,344,781 + A4249_RS06605 0.53 +0.6
1,344,781 + A4249_RS06605 0.53 +0.9
1,344,781 + A4249_RS06605 0.53 +0.2
1,344,781 + A4249_RS06605 0.53 -1.2
1,344,782 - A4249_RS06605 0.53 -1.4
1,344,782 - A4249_RS06605 0.53 +0.8
1,344,782 - A4249_RS06605 0.53 -1.0
1,344,782 - A4249_RS06605 0.53 -0.3
1,344,802 + A4249_RS06605 0.54 -0.2
1,344,832 + A4249_RS06605 0.57 -2.0
1,344,832 + A4249_RS06605 0.57 -2.1
1,344,832 + A4249_RS06605 0.57 +1.2
1,344,832 + A4249_RS06605 0.57 -2.1
1,344,833 - A4249_RS06605 0.57 +2.2
1,344,833 - A4249_RS06605 0.57 -0.6
1,344,833 - A4249_RS06605 0.57 +0.9
1,344,833 - A4249_RS06605 0.57 -0.0
1,344,840 - A4249_RS06605 0.58 +0.0
1,344,920 - A4249_RS06605 0.64 -0.3
1,344,920 - A4249_RS06605 0.64 +0.2
1,345,069 + A4249_RS06605 0.77 -1.6
1,345,069 + A4249_RS06605 0.77 -0.3
1,345,069 + A4249_RS06605 0.77 +0.2
1,345,069 + A4249_RS06605 0.77 +0.6
1,345,069 + A4249_RS06605 0.77 -1.4
1,345,069 + A4249_RS06605 0.77 -0.4
1,345,069 + A4249_RS06605 0.77 -0.0
1,345,069 + A4249_RS06605 0.77 -0.1
1,345,069 + A4249_RS06605 0.77 -0.0
1,345,069 + A4249_RS06605 0.77 -1.1
1,345,070 - A4249_RS06605 0.77 -0.4
1,345,070 - A4249_RS06605 0.77 +0.7
1,345,070 - A4249_RS06605 0.77 +0.4
1,345,070 - A4249_RS06605 0.77 -0.4
1,345,280 - +0.5
1,345,280 - +0.2
1,345,280 - -0.1
1,345,508 + A4249_RS06610 0.23 -0.5
1,345,508 + A4249_RS06610 0.23 +1.6
1,345,508 + A4249_RS06610 0.23 +0.2
1,345,509 - A4249_RS06610 0.23 -0.5
1,345,509 - A4249_RS06610 0.23 -1.4
1,345,509 - A4249_RS06610 0.23 -0.5
1,345,509 - A4249_RS06610 0.23 -0.1
1,345,606 + A4249_RS06610 0.37 -1.4
1,345,606 + A4249_RS06610 0.37 +0.9
1,345,606 + A4249_RS06610 0.37 -0.9
1,345,607 - A4249_RS06610 0.37 -1.6
1,345,607 - A4249_RS06610 0.37 -0.2
1,345,622 + A4249_RS06610 0.39 -1.2
1,345,623 - A4249_RS06610 0.39 +0.4
1,345,623 - A4249_RS06610 0.39 +0.0
1,345,623 - A4249_RS06610 0.39 +0.2
1,345,705 + A4249_RS06610 0.50 -0.6
1,345,705 + A4249_RS06610 0.50 -1.1
1,345,706 - A4249_RS06610 0.50 -0.3
1,345,785 + A4249_RS06610 0.61 +1.2
1,345,785 + A4249_RS06610 0.61 -0.3
1,345,786 - A4249_RS06610 0.61 -0.6
1,345,786 - A4249_RS06610 0.61 +1.9
1,345,786 - A4249_RS06610 0.61 -1.1
1,345,786 - A4249_RS06610 0.61 -0.5
1,345,786 - A4249_RS06610 0.61 -1.4
1,345,786 - A4249_RS06610 0.61 +0.2
1,345,786 - A4249_RS06610 0.61 +0.0
1,345,791 + A4249_RS06610 0.62 +0.7
1,345,792 - A4249_RS06610 0.62 -0.5
1,345,792 - A4249_RS06610 0.62 +1.2
1,345,834 + A4249_RS06610 0.68 +2.0
1,345,834 + A4249_RS06610 0.68 -0.1
1,345,835 - A4249_RS06610 0.68 -0.5
1,346,023 + -1.2
1,346,023 + -0.5
1,346,023 + +2.2
1,346,023 + +1.2
1,346,023 + +0.2
1,346,024 - -1.1
1,346,024 - -0.1
1,346,024 - +0.2
1,346,043 + -1.4
1,346,043 + -0.5
1,346,043 + +0.1
1,346,043 + -0.5
1,346,043 + -0.6
1,346,044 - -1.0
1,346,044 - -0.5
1,346,044 - -0.4
1,346,044 - +0.2
1,346,044 - +0.5
1,346,044 - +2.3
1,346,044 - +0.6
1,346,044 - -0.8
1,346,044 - +0.6
1,346,044 - +0.7
1,346,057 + +0.9
1,346,057 + +0.2
1,346,057 + +0.8
1,346,057 + -0.5
1,346,057 + -0.3
1,346,057 + +0.5
1,346,057 + -0.3
1,346,057 + +2.4
1,346,057 + -0.8
1,346,057 + +1.5
1,346,057 + -2.4
1,346,057 + +0.2
1,346,057 + +0.0
1,346,058 - +0.6
1,346,058 - +0.2
1,346,058 - +1.5
1,346,058 - +0.5
1,346,058 - +0.3
1,346,058 - -0.5
1,346,058 - +0.1
1,346,250 + A4249_RS06615 0.14 +0.8
1,346,250 + A4249_RS06615 0.14 -0.6
1,346,251 - A4249_RS06615 0.14 +0.4
1,346,251 - A4249_RS06615 0.14 +2.2
1,346,251 - A4249_RS06615 0.14 +1.7
1,346,260 + A4249_RS06615 0.14 +0.2
1,346,260 + A4249_RS06615 0.14 -1.8
1,346,261 - A4249_RS06615 0.14 -1.7
1,346,261 - A4249_RS06615 0.14 +1.2
1,346,286 + A4249_RS06615 0.16 -1.0
1,346,287 - A4249_RS06615 0.16 -0.4
1,346,341 + A4249_RS06615 0.20 -1.7
1,346,341 + A4249_RS06615 0.20 +0.2
1,346,342 - A4249_RS06615 0.20 +2.0
1,346,342 - A4249_RS06615 0.20 -1.7
1,346,342 - A4249_RS06615 0.20 -1.1
1,346,411 + A4249_RS06615 0.25 -1.2
1,346,412 - A4249_RS06615 0.25 +0.8
1,346,412 - A4249_RS06615 0.25 -0.1
1,346,614 + A4249_RS06615 0.40 +0.3
1,346,614 + A4249_RS06615 0.40 +1.9
1,346,614 + A4249_RS06615 0.40 +0.3
1,346,614 + A4249_RS06615 0.40 +0.0
1,346,614 + A4249_RS06615 0.40 +0.2
1,346,614 + A4249_RS06615 0.40 -0.3
1,346,614 + A4249_RS06615 0.40 +0.5
1,346,614 + A4249_RS06615 0.40 +2.0
1,346,614 + A4249_RS06615 0.40 -0.6
1,346,614 + A4249_RS06615 0.40 -1.0
1,346,615 - A4249_RS06615 0.40 +0.1
1,346,615 - A4249_RS06615 0.40 +1.4
1,346,615 - A4249_RS06615 0.40 +0.3
1,346,615 - A4249_RS06615 0.40 +1.2
1,346,615 - A4249_RS06615 0.40 +0.4
1,346,615 - A4249_RS06615 0.40 +1.0
1,346,725 + A4249_RS06615 0.48 -0.5
1,346,942 + A4249_RS06615 0.64 +0.1
1,346,942 + A4249_RS06615 0.64 -0.7
1,346,942 + A4249_RS06615 0.64 +1.2
1,346,942 + A4249_RS06615 0.64 -2.0
1,346,942 + A4249_RS06615 0.64 +0.2
1,346,942 + A4249_RS06615 0.64 -1.2
1,346,942 + A4249_RS06615 0.64 -0.2
1,346,942 + A4249_RS06615 0.64 +1.7
1,346,943 - A4249_RS06615 0.64 +0.4
1,346,943 - A4249_RS06615 0.64 +0.6
1,346,943 - A4249_RS06615 0.64 +0.7
1,346,943 - A4249_RS06615 0.64 +0.8
1,346,943 - A4249_RS06615 0.64 +0.7
1,346,943 - A4249_RS06615 0.64 -1.8
1,346,943 - A4249_RS06615 0.64 +0.4
1,346,943 - A4249_RS06615 0.64 -0.2
1,346,943 - A4249_RS06615 0.64 +0.4
1,347,026 + A4249_RS06615 0.70 +0.5
1,347,027 - A4249_RS06615 0.70 +0.4
1,347,027 - A4249_RS06615 0.70 -0.4
1,347,056 + A4249_RS06615 0.72 -0.4
1,347,057 - A4249_RS06615 0.72 -0.8
1,347,057 - A4249_RS06615 0.72 +0.6
1,347,057 - A4249_RS06615 0.72 -1.2

Or see this region's nucleotide sequence