Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS04075

Experiment: Tween 20 (C), 30C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS04070 and A4249_RS04075 are separated by 19 nucleotidesA4249_RS04075 and A4249_RS04080 are separated by 25 nucleotides A4249_RS04070: A4249_RS04070 - hypothetical protein, at 843,363 to 845,084 _RS04070 A4249_RS04075: A4249_RS04075 - thioredoxin domain-containing protein, at 845,104 to 845,883 _RS04075 A4249_RS04080: A4249_RS04080 - M48 family metalloprotease, at 845,909 to 847,309 _RS04080 Position (kb) 845 846Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 844.143 kb on + strand, within A4249_RS04070at 844.144 kb on - strand, within A4249_RS04070at 844.213 kb on - strand, within A4249_RS04070at 844.228 kb on - strand, within A4249_RS04070at 844.228 kb on - strand, within A4249_RS04070at 844.228 kb on - strand, within A4249_RS04070at 844.278 kb on + strand, within A4249_RS04070at 844.278 kb on + strand, within A4249_RS04070at 844.278 kb on + strand, within A4249_RS04070at 844.279 kb on - strand, within A4249_RS04070at 844.279 kb on - strand, within A4249_RS04070at 844.279 kb on - strand, within A4249_RS04070at 844.279 kb on - strand, within A4249_RS04070at 844.279 kb on - strand, within A4249_RS04070at 844.406 kb on + strand, within A4249_RS04070at 844.407 kb on + strand, within A4249_RS04070at 844.407 kb on + strand, within A4249_RS04070at 844.407 kb on + strand, within A4249_RS04070at 844.407 kb on + strand, within A4249_RS04070at 844.407 kb on + strand, within A4249_RS04070at 844.407 kb on + strand, within A4249_RS04070at 844.407 kb on + strand, within A4249_RS04070at 844.408 kb on - strand, within A4249_RS04070at 844.408 kb on - strand, within A4249_RS04070at 844.408 kb on - strand, within A4249_RS04070at 844.408 kb on - strand, within A4249_RS04070at 844.408 kb on - strand, within A4249_RS04070at 844.408 kb on - strand, within A4249_RS04070at 844.408 kb on - strand, within A4249_RS04070at 844.408 kb on - strand, within A4249_RS04070at 844.408 kb on - strand, within A4249_RS04070at 844.408 kb on - strand, within A4249_RS04070at 844.408 kb on - strand, within A4249_RS04070at 844.408 kb on - strand, within A4249_RS04070at 844.409 kb on + strand, within A4249_RS04070at 844.409 kb on + strand, within A4249_RS04070at 844.409 kb on + strand, within A4249_RS04070at 844.409 kb on + strand, within A4249_RS04070at 844.409 kb on + strand, within A4249_RS04070at 844.409 kb on + strand, within A4249_RS04070at 844.410 kb on - strand, within A4249_RS04070at 844.410 kb on - strand, within A4249_RS04070at 844.410 kb on - strand, within A4249_RS04070at 844.410 kb on - strand, within A4249_RS04070at 844.410 kb on - strand, within A4249_RS04070at 844.410 kb on - strand, within A4249_RS04070at 844.410 kb on - strand, within A4249_RS04070at 844.419 kb on + strand, within A4249_RS04070at 844.419 kb on + strand, within A4249_RS04070at 844.419 kb on + strand, within A4249_RS04070at 844.419 kb on + strand, within A4249_RS04070at 844.419 kb on + strand, within A4249_RS04070at 844.461 kb on + strand, within A4249_RS04070at 844.462 kb on - strand, within A4249_RS04070at 844.462 kb on - strand, within A4249_RS04070at 844.462 kb on - strand, within A4249_RS04070at 844.462 kb on - strand, within A4249_RS04070at 844.462 kb on - strand, within A4249_RS04070at 844.462 kb on - strand, within A4249_RS04070at 844.470 kb on + strand, within A4249_RS04070at 844.470 kb on + strand, within A4249_RS04070at 844.498 kb on - strand, within A4249_RS04070at 844.591 kb on - strand, within A4249_RS04070at 844.741 kb on + strand, within A4249_RS04070at 844.741 kb on + strand, within A4249_RS04070at 844.742 kb on - strand, within A4249_RS04070at 844.742 kb on - strand, within A4249_RS04070at 844.742 kb on - strand, within A4249_RS04070at 844.742 kb on - strand, within A4249_RS04070at 844.742 kb on - strand, within A4249_RS04070at 844.742 kb on - strand, within A4249_RS04070at 844.742 kb on - strand, within A4249_RS04070at 844.774 kb on - strand, within A4249_RS04070at 844.774 kb on - strand, within A4249_RS04070at 844.795 kb on - strand, within A4249_RS04070at 844.857 kb on + strand, within A4249_RS04070at 844.962 kb on + strandat 844.963 kb on - strandat 844.968 kb on + strandat 844.968 kb on + strandat 844.968 kb on + strandat 844.968 kb on + strandat 844.968 kb on + strandat 844.968 kb on + strandat 844.968 kb on + strandat 844.968 kb on + strandat 844.968 kb on + strandat 844.968 kb on + strandat 844.968 kb on + strandat 844.968 kb on + strandat 844.968 kb on + strandat 844.969 kb on - strandat 844.969 kb on - strandat 844.969 kb on - strandat 844.969 kb on - strandat 844.969 kb on - strandat 844.969 kb on - strandat 844.969 kb on - strandat 844.969 kb on - strandat 844.969 kb on - strandat 844.969 kb on - strandat 844.969 kb on - strandat 844.969 kb on - strandat 844.971 kb on + strandat 844.971 kb on + strandat 844.971 kb on + strandat 844.971 kb on + strandat 844.971 kb on + strandat 844.971 kb on + strandat 844.971 kb on + strandat 844.971 kb on + strandat 844.971 kb on + strandat 844.971 kb on + strandat 844.971 kb on + strandat 844.971 kb on + strandat 844.971 kb on + strandat 844.971 kb on + strandat 844.972 kb on - strandat 844.972 kb on - strandat 844.972 kb on - strandat 844.972 kb on - strandat 844.972 kb on - strandat 844.972 kb on - strandat 844.972 kb on - strandat 844.972 kb on - strandat 844.972 kb on - strandat 844.972 kb on - strandat 845.357 kb on + strand, within A4249_RS04075at 845.357 kb on + strand, within A4249_RS04075at 845.357 kb on + strand, within A4249_RS04075at 845.357 kb on + strand, within A4249_RS04075at 845.357 kb on + strand, within A4249_RS04075at 845.357 kb on + strand, within A4249_RS04075at 845.358 kb on - strand, within A4249_RS04075at 845.358 kb on - strand, within A4249_RS04075at 845.358 kb on - strand, within A4249_RS04075at 845.358 kb on - strand, within A4249_RS04075at 845.358 kb on - strand, within A4249_RS04075at 845.358 kb on - strand, within A4249_RS04075at 845.358 kb on - strand, within A4249_RS04075at 845.369 kb on + strand, within A4249_RS04075at 845.369 kb on + strand, within A4249_RS04075at 845.369 kb on + strand, within A4249_RS04075at 845.369 kb on + strand, within A4249_RS04075at 845.369 kb on + strand, within A4249_RS04075at 845.369 kb on + strand, within A4249_RS04075at 845.370 kb on - strand, within A4249_RS04075at 845.370 kb on - strand, within A4249_RS04075at 845.370 kb on - strand, within A4249_RS04075at 845.370 kb on - strand, within A4249_RS04075at 845.370 kb on - strand, within A4249_RS04075at 845.370 kb on - strand, within A4249_RS04075at 845.370 kb on - strand, within A4249_RS04075at 845.370 kb on - strand, within A4249_RS04075at 845.411 kb on + strand, within A4249_RS04075at 845.411 kb on + strand, within A4249_RS04075at 845.411 kb on + strand, within A4249_RS04075at 845.411 kb on + strand, within A4249_RS04075at 845.411 kb on + strand, within A4249_RS04075at 845.412 kb on - strand, within A4249_RS04075at 845.412 kb on - strand, within A4249_RS04075at 845.412 kb on - strand, within A4249_RS04075at 845.412 kb on - strand, within A4249_RS04075at 845.501 kb on + strand, within A4249_RS04075at 845.502 kb on - strand, within A4249_RS04075at 845.723 kb on + strand, within A4249_RS04075at 845.723 kb on + strand, within A4249_RS04075at 845.723 kb on + strand, within A4249_RS04075at 845.723 kb on + strand, within A4249_RS04075at 845.724 kb on - strand, within A4249_RS04075at 845.724 kb on - strand, within A4249_RS04075at 845.724 kb on - strand, within A4249_RS04075at 845.724 kb on - strand, within A4249_RS04075at 845.724 kb on - strand, within A4249_RS04075at 845.753 kb on + strand, within A4249_RS04075at 845.754 kb on - strand, within A4249_RS04075at 845.754 kb on - strand, within A4249_RS04075at 845.754 kb on - strand, within A4249_RS04075at 845.804 kb on + strand, within A4249_RS04075at 845.805 kb on - strand, within A4249_RS04075at 845.902 kb on + strandat 845.903 kb on - strandat 845.903 kb on - strandat 846.093 kb on + strand, within A4249_RS04080at 846.096 kb on + strand, within A4249_RS04080at 846.097 kb on - strand, within A4249_RS04080at 846.144 kb on + strand, within A4249_RS04080at 846.144 kb on + strand, within A4249_RS04080at 846.584 kb on - strand, within A4249_RS04080at 846.609 kb on + strand, within A4249_RS04080at 846.610 kb on - strand, within A4249_RS04080at 846.631 kb on - strand, within A4249_RS04080at 846.681 kb on + strand, within A4249_RS04080at 846.682 kb on - strand, within A4249_RS04080at 846.822 kb on + strand, within A4249_RS04080at 846.822 kb on + strand, within A4249_RS04080at 846.822 kb on + strand, within A4249_RS04080at 846.822 kb on + strand, within A4249_RS04080at 846.823 kb on - strand, within A4249_RS04080at 846.823 kb on - strand, within A4249_RS04080at 846.823 kb on - strand, within A4249_RS04080at 846.823 kb on - strand, within A4249_RS04080at 846.850 kb on - strand, within A4249_RS04080at 846.850 kb on - strand, within A4249_RS04080

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Per-strain Table

Position Strand Gene LocusTag Fraction Tween 20 (C), 30C
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844,143 + A4249_RS04070 0.45 +0.9
844,144 - A4249_RS04070 0.45 -0.3
844,213 - A4249_RS04070 0.49 +0.0
844,228 - A4249_RS04070 0.50 -0.6
844,228 - A4249_RS04070 0.50 -0.4
844,228 - A4249_RS04070 0.50 -2.1
844,278 + A4249_RS04070 0.53 +0.2
844,278 + A4249_RS04070 0.53 +0.1
844,278 + A4249_RS04070 0.53 +0.4
844,279 - A4249_RS04070 0.53 +0.3
844,279 - A4249_RS04070 0.53 +1.2
844,279 - A4249_RS04070 0.53 +0.1
844,279 - A4249_RS04070 0.53 +0.8
844,279 - A4249_RS04070 0.53 +0.7
844,406 + A4249_RS04070 0.61 +1.0
844,407 + A4249_RS04070 0.61 -1.8
844,407 + A4249_RS04070 0.61 +1.6
844,407 + A4249_RS04070 0.61 -1.2
844,407 + A4249_RS04070 0.61 -0.1
844,407 + A4249_RS04070 0.61 +0.8
844,407 + A4249_RS04070 0.61 +1.9
844,407 + A4249_RS04070 0.61 -0.5
844,408 - A4249_RS04070 0.61 +0.2
844,408 - A4249_RS04070 0.61 +0.2
844,408 - A4249_RS04070 0.61 +1.2
844,408 - A4249_RS04070 0.61 +0.7
844,408 - A4249_RS04070 0.61 +0.4
844,408 - A4249_RS04070 0.61 -0.8
844,408 - A4249_RS04070 0.61 -1.3
844,408 - A4249_RS04070 0.61 +2.5
844,408 - A4249_RS04070 0.61 -0.2
844,408 - A4249_RS04070 0.61 +1.8
844,408 - A4249_RS04070 0.61 +2.2
844,408 - A4249_RS04070 0.61 +0.5
844,409 + A4249_RS04070 0.61 -0.8
844,409 + A4249_RS04070 0.61 -0.3
844,409 + A4249_RS04070 0.61 -0.1
844,409 + A4249_RS04070 0.61 -0.2
844,409 + A4249_RS04070 0.61 +1.2
844,409 + A4249_RS04070 0.61 +0.2
844,410 - A4249_RS04070 0.61 -2.1
844,410 - A4249_RS04070 0.61 +0.5
844,410 - A4249_RS04070 0.61 -0.7
844,410 - A4249_RS04070 0.61 -0.6
844,410 - A4249_RS04070 0.61 +1.6
844,410 - A4249_RS04070 0.61 +0.2
844,410 - A4249_RS04070 0.61 +0.7
844,419 + A4249_RS04070 0.61 +0.5
844,419 + A4249_RS04070 0.61 +0.5
844,419 + A4249_RS04070 0.61 +3.7
844,419 + A4249_RS04070 0.61 -0.2
844,419 + A4249_RS04070 0.61 +1.4
844,461 + A4249_RS04070 0.64 -0.4
844,462 - A4249_RS04070 0.64 -0.1
844,462 - A4249_RS04070 0.64 -0.1
844,462 - A4249_RS04070 0.64 -0.7
844,462 - A4249_RS04070 0.64 +1.2
844,462 - A4249_RS04070 0.64 +0.4
844,462 - A4249_RS04070 0.64 +0.0
844,470 + A4249_RS04070 0.64 -0.9
844,470 + A4249_RS04070 0.64 +1.3
844,498 - A4249_RS04070 0.66 +0.9
844,591 - A4249_RS04070 0.71 +0.6
844,741 + A4249_RS04070 0.80 -0.5
844,741 + A4249_RS04070 0.80 -1.4
844,742 - A4249_RS04070 0.80 +2.2
844,742 - A4249_RS04070 0.80 +0.5
844,742 - A4249_RS04070 0.80 -2.6
844,742 - A4249_RS04070 0.80 +0.4
844,742 - A4249_RS04070 0.80 +0.8
844,742 - A4249_RS04070 0.80 +0.8
844,742 - A4249_RS04070 0.80 -0.8
844,774 - A4249_RS04070 0.82 +0.7
844,774 - A4249_RS04070 0.82 -0.8
844,795 - A4249_RS04070 0.83 +0.5
844,857 + A4249_RS04070 0.87 +0.8
844,962 + -0.9
844,963 - -0.3
844,968 + +1.0
844,968 + -0.1
844,968 + +0.2
844,968 + -0.4
844,968 + -0.2
844,968 + +1.6
844,968 + -0.1
844,968 + +0.3
844,968 + -0.4
844,968 + -0.0
844,968 + +0.0
844,968 + -0.8
844,968 + +0.8
844,969 - -2.5
844,969 - +1.0
844,969 - +1.6
844,969 - +0.2
844,969 - +0.2
844,969 - +0.9
844,969 - -1.8
844,969 - +3.0
844,969 - -2.1
844,969 - -1.2
844,969 - -0.1
844,969 - +0.6
844,971 + +0.4
844,971 + -0.9
844,971 + -1.1
844,971 + +0.0
844,971 + -0.0
844,971 + +0.3
844,971 + -0.6
844,971 + +0.4
844,971 + +0.2
844,971 + +0.2
844,971 + +0.2
844,971 + -0.4
844,971 + +0.2
844,971 + -0.6
844,972 - -0.2
844,972 - +1.0
844,972 - +0.7
844,972 - -0.4
844,972 - +0.5
844,972 - +0.2
844,972 - -0.2
844,972 - +0.2
844,972 - +0.1
844,972 - +0.8
845,357 + A4249_RS04075 0.32 -1.0
845,357 + A4249_RS04075 0.32 -0.7
845,357 + A4249_RS04075 0.32 -2.5
845,357 + A4249_RS04075 0.32 -2.1
845,357 + A4249_RS04075 0.32 -1.4
845,357 + A4249_RS04075 0.32 -2.0
845,358 - A4249_RS04075 0.33 -3.1
845,358 - A4249_RS04075 0.33 -2.9
845,358 - A4249_RS04075 0.33 -2.1
845,358 - A4249_RS04075 0.33 -2.9
845,358 - A4249_RS04075 0.33 -3.1
845,358 - A4249_RS04075 0.33 -1.3
845,358 - A4249_RS04075 0.33 -1.2
845,369 + A4249_RS04075 0.34 -3.3
845,369 + A4249_RS04075 0.34 -1.4
845,369 + A4249_RS04075 0.34 -1.1
845,369 + A4249_RS04075 0.34 -1.1
845,369 + A4249_RS04075 0.34 -2.8
845,369 + A4249_RS04075 0.34 -0.6
845,370 - A4249_RS04075 0.34 -2.5
845,370 - A4249_RS04075 0.34 -2.5
845,370 - A4249_RS04075 0.34 -2.4
845,370 - A4249_RS04075 0.34 -2.1
845,370 - A4249_RS04075 0.34 -3.6
845,370 - A4249_RS04075 0.34 -0.8
845,370 - A4249_RS04075 0.34 -3.5
845,370 - A4249_RS04075 0.34 -2.1
845,411 + A4249_RS04075 0.39 -1.8
845,411 + A4249_RS04075 0.39 -2.8
845,411 + A4249_RS04075 0.39 -2.5
845,411 + A4249_RS04075 0.39 -4.1
845,411 + A4249_RS04075 0.39 -2.3
845,412 - A4249_RS04075 0.39 -3.4
845,412 - A4249_RS04075 0.39 -2.5
845,412 - A4249_RS04075 0.39 -2.3
845,412 - A4249_RS04075 0.39 -0.5
845,501 + A4249_RS04075 0.51 -2.7
845,502 - A4249_RS04075 0.51 -2.2
845,723 + A4249_RS04075 0.79 -3.9
845,723 + A4249_RS04075 0.79 -3.8
845,723 + A4249_RS04075 0.79 -2.4
845,723 + A4249_RS04075 0.79 -1.4
845,724 - A4249_RS04075 0.79 -2.0
845,724 - A4249_RS04075 0.79 -2.1
845,724 - A4249_RS04075 0.79 -2.6
845,724 - A4249_RS04075 0.79 -3.1
845,724 - A4249_RS04075 0.79 -2.8
845,753 + A4249_RS04075 0.83 -1.7
845,754 - A4249_RS04075 0.83 -2.5
845,754 - A4249_RS04075 0.83 -0.3
845,754 - A4249_RS04075 0.83 -2.6
845,804 + A4249_RS04075 0.90 -1.4
845,805 - A4249_RS04075 0.90 -1.5
845,902 + +0.2
845,903 - -0.6
845,903 - +0.8
846,093 + A4249_RS04080 0.13 -1.8
846,096 + A4249_RS04080 0.13 +0.2
846,097 - A4249_RS04080 0.13 -2.8
846,144 + A4249_RS04080 0.17 -2.4
846,144 + A4249_RS04080 0.17 -2.1
846,584 - A4249_RS04080 0.48 +0.2
846,609 + A4249_RS04080 0.50 -2.1
846,610 - A4249_RS04080 0.50 +0.2
846,631 - A4249_RS04080 0.52 -1.4
846,681 + A4249_RS04080 0.55 +0.2
846,682 - A4249_RS04080 0.55 -2.1
846,822 + A4249_RS04080 0.65 -1.4
846,822 + A4249_RS04080 0.65 -2.6
846,822 + A4249_RS04080 0.65 -1.4
846,822 + A4249_RS04080 0.65 +0.2
846,823 - A4249_RS04080 0.65 -2.0
846,823 - A4249_RS04080 0.65 +0.2
846,823 - A4249_RS04080 0.65 +0.2
846,823 - A4249_RS04080 0.65 -1.4
846,850 - A4249_RS04080 0.67 -2.6
846,850 - A4249_RS04080 0.67 -0.8

Or see this region's nucleotide sequence