Experiment: Tween 20 (C), 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS16195 and A4249_RS01845 overlap by 1 nucleotides A4249_RS01845 and A4249_RS01850 are separated by 95 nucleotides A4249_RS01850 and A4249_RS01855 are separated by 226 nucleotides A4249_RS01855 and A4249_RS01860 are separated by 14 nucleotides
A4249_RS16195: A4249_RS16195 - RHS domain-containing protein, at 358,207 to 362,736
_RS16195
A4249_RS01845: A4249_RS01845 - hypothetical protein, at 362,736 to 363,062
_RS01845
A4249_RS01850: A4249_RS01850 - IS6 family transposase, at 363,158 to 363,850
_RS01850
A4249_RS01855: A4249_RS01855 - hypothetical protein, at 364,077 to 364,634
_RS01855
A4249_RS01860: A4249_RS01860 - RHS repeat-associated core domain-containing protein, at 364,649 to 368,884
_RS01860
Position (kb) 363
364 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 362.218 kb on + strand, within A4249_RS16195 at 362.218 kb on + strand, within A4249_RS16195 at 362.218 kb on + strand, within A4249_RS16195 at 362.218 kb on + strand, within A4249_RS16195 at 362.219 kb on - strand, within A4249_RS16195 at 362.239 kb on + strand, within A4249_RS16195 at 362.260 kb on + strand, within A4249_RS16195 at 362.260 kb on + strand, within A4249_RS16195 at 362.260 kb on + strand, within A4249_RS16195 at 362.260 kb on + strand, within A4249_RS16195 at 362.260 kb on + strand, within A4249_RS16195 at 362.261 kb on - strand, within A4249_RS16195 at 362.261 kb on - strand, within A4249_RS16195 at 362.261 kb on - strand, within A4249_RS16195 at 362.261 kb on - strand, within A4249_RS16195 at 362.261 kb on - strand, within A4249_RS16195 at 362.287 kb on + strand at 362.287 kb on + strand at 362.287 kb on + strand at 362.288 kb on - strand at 362.288 kb on - strand at 362.288 kb on - strand at 362.305 kb on + strand at 362.305 kb on + strand at 362.305 kb on + strand at 362.306 kb on - strand at 362.306 kb on - strand at 362.306 kb on - strand at 362.306 kb on - strand at 362.306 kb on - strand at 362.306 kb on - strand at 362.306 kb on - strand at 362.306 kb on - strand at 362.311 kb on + strand at 362.311 kb on + strand at 362.311 kb on + strand at 362.311 kb on + strand at 362.311 kb on + strand at 362.311 kb on + strand at 362.311 kb on + strand at 362.311 kb on + strand at 362.311 kb on + strand at 362.311 kb on + strand at 362.311 kb on + strand at 362.311 kb on + strand at 362.312 kb on - strand at 362.312 kb on - strand at 362.312 kb on - strand at 362.312 kb on - strand at 362.312 kb on - strand at 362.312 kb on - strand at 362.312 kb on - strand at 362.312 kb on - strand at 362.312 kb on - strand at 362.312 kb on - strand at 362.336 kb on + strand at 362.337 kb on - strand at 362.425 kb on + strand at 362.426 kb on - strand at 362.426 kb on - strand at 362.505 kb on + strand at 362.505 kb on + strand at 362.505 kb on + strand at 362.505 kb on + strand at 362.505 kb on + strand at 362.505 kb on + strand at 362.505 kb on + strand at 362.505 kb on + strand at 362.505 kb on + strand at 362.506 kb on - strand at 362.506 kb on - strand at 362.506 kb on - strand at 362.506 kb on - strand at 362.506 kb on - strand at 362.506 kb on - strand at 362.506 kb on - strand at 362.506 kb on - strand at 362.506 kb on - strand at 362.510 kb on + strand at 362.510 kb on + strand at 362.511 kb on - strand at 362.511 kb on - strand at 362.620 kb on + strand at 362.621 kb on - strand at 362.676 kb on + strand at 362.676 kb on + strand at 362.677 kb on - strand at 362.677 kb on - strand at 362.677 kb on - strand at 362.712 kb on + strand at 362.712 kb on + strand at 362.712 kb on + strand at 362.734 kb on + strand at 362.735 kb on - strand at 362.764 kb on + strand at 362.884 kb on + strand, within A4249_RS01845 at 363.119 kb on - strand at 363.243 kb on + strand, within A4249_RS01850 at 363.243 kb on + strand, within A4249_RS01850 at 363.243 kb on + strand, within A4249_RS01850 at 363.243 kb on + strand, within A4249_RS01850 at 363.243 kb on + strand, within A4249_RS01850 at 363.243 kb on + strand, within A4249_RS01850 at 363.243 kb on + strand, within A4249_RS01850 at 363.244 kb on - strand, within A4249_RS01850 at 363.244 kb on - strand, within A4249_RS01850 at 363.255 kb on + strand, within A4249_RS01850 at 363.255 kb on + strand, within A4249_RS01850 at 363.255 kb on + strand, within A4249_RS01850 at 363.255 kb on + strand, within A4249_RS01850 at 363.255 kb on + strand, within A4249_RS01850 at 363.255 kb on + strand, within A4249_RS01850 at 363.256 kb on - strand, within A4249_RS01850 at 363.256 kb on - strand, within A4249_RS01850 at 363.256 kb on - strand, within A4249_RS01850 at 363.256 kb on - strand, within A4249_RS01850 at 363.256 kb on - strand, within A4249_RS01850 at 363.429 kb on + strand, within A4249_RS01850 at 363.430 kb on - strand, within A4249_RS01850 at 363.714 kb on + strand, within A4249_RS01850 at 363.714 kb on + strand, within A4249_RS01850 at 363.714 kb on + strand, within A4249_RS01850 at 363.714 kb on + strand, within A4249_RS01850 at 363.714 kb on + strand, within A4249_RS01850 at 363.714 kb on + strand, within A4249_RS01850 at 363.715 kb on - strand, within A4249_RS01850 at 363.715 kb on - strand, within A4249_RS01850 at 363.743 kb on + strand, within A4249_RS01850 at 363.744 kb on - strand, within A4249_RS01850 at 363.744 kb on - strand, within A4249_RS01850 at 363.744 kb on - strand, within A4249_RS01850 at 363.744 kb on - strand, within A4249_RS01850 at 363.744 kb on - strand, within A4249_RS01850 at 363.783 kb on + strand at 363.783 kb on + strand at 363.783 kb on + strand at 363.784 kb on - strand at 363.784 kb on - strand at 363.784 kb on - strand at 363.839 kb on + strand at 363.840 kb on - strand at 363.840 kb on - strand at 363.867 kb on + strand at 363.875 kb on + strand at 363.875 kb on + strand at 363.875 kb on + strand at 363.875 kb on + strand at 363.876 kb on - strand at 363.901 kb on + strand at 363.901 kb on + strand at 363.901 kb on + strand at 363.902 kb on - strand at 363.902 kb on - strand at 363.907 kb on + strand at 363.907 kb on + strand at 363.907 kb on + strand at 363.908 kb on - strand at 363.908 kb on - strand at 363.973 kb on - strand at 364.017 kb on + strand at 364.114 kb on + strand at 364.114 kb on + strand at 364.114 kb on + strand at 364.115 kb on - strand at 364.123 kb on + strand at 364.124 kb on - strand at 364.124 kb on - strand at 364.158 kb on + strand, within A4249_RS01855 at 364.158 kb on + strand, within A4249_RS01855 at 364.158 kb on + strand, within A4249_RS01855 at 364.158 kb on + strand, within A4249_RS01855 at 364.159 kb on - strand, within A4249_RS01855 at 364.164 kb on + strand, within A4249_RS01855 at 364.164 kb on + strand, within A4249_RS01855 at 364.164 kb on + strand, within A4249_RS01855 at 364.164 kb on + strand, within A4249_RS01855 at 364.165 kb on - strand, within A4249_RS01855 at 364.165 kb on - strand, within A4249_RS01855 at 364.165 kb on - strand, within A4249_RS01855 at 364.165 kb on - strand, within A4249_RS01855 at 364.165 kb on - strand, within A4249_RS01855 at 364.165 kb on - strand, within A4249_RS01855 at 364.165 kb on - strand, within A4249_RS01855 at 364.183 kb on + strand, within A4249_RS01855 at 364.184 kb on - strand, within A4249_RS01855 at 364.184 kb on - strand, within A4249_RS01855 at 364.197 kb on - strand, within A4249_RS01855 at 364.197 kb on - strand, within A4249_RS01855 at 364.197 kb on - strand, within A4249_RS01855 at 364.197 kb on - strand, within A4249_RS01855 at 364.209 kb on - strand, within A4249_RS01855 at 364.209 kb on - strand, within A4249_RS01855 at 364.209 kb on - strand, within A4249_RS01855 at 364.209 kb on - strand, within A4249_RS01855 at 364.230 kb on + strand, within A4249_RS01855 at 364.230 kb on + strand, within A4249_RS01855 at 364.230 kb on + strand, within A4249_RS01855 at 364.230 kb on + strand, within A4249_RS01855 at 364.283 kb on + strand, within A4249_RS01855 at 364.283 kb on + strand, within A4249_RS01855 at 364.283 kb on + strand, within A4249_RS01855 at 364.284 kb on - strand, within A4249_RS01855 at 364.284 kb on - strand, within A4249_RS01855 at 364.295 kb on + strand, within A4249_RS01855 at 364.296 kb on - strand, within A4249_RS01855 at 364.307 kb on - strand, within A4249_RS01855 at 364.404 kb on + strand, within A4249_RS01855 at 364.404 kb on + strand, within A4249_RS01855 at 364.404 kb on + strand, within A4249_RS01855 at 364.404 kb on + strand, within A4249_RS01855 at 364.404 kb on + strand, within A4249_RS01855 at 364.404 kb on + strand, within A4249_RS01855 at 364.404 kb on + strand, within A4249_RS01855 at 364.404 kb on + strand, within A4249_RS01855 at 364.405 kb on - strand, within A4249_RS01855 at 364.405 kb on - strand, within A4249_RS01855 at 364.405 kb on - strand, within A4249_RS01855 at 364.405 kb on - strand, within A4249_RS01855 at 364.441 kb on - strand, within A4249_RS01855 at 364.494 kb on + strand, within A4249_RS01855 at 364.494 kb on + strand, within A4249_RS01855 at 364.494 kb on + strand, within A4249_RS01855 at 364.494 kb on + strand, within A4249_RS01855 at 364.495 kb on - strand, within A4249_RS01855 at 364.495 kb on - strand, within A4249_RS01855 at 364.495 kb on - strand, within A4249_RS01855 at 364.495 kb on - strand, within A4249_RS01855 at 364.587 kb on + strand at 364.587 kb on + strand at 364.587 kb on + strand at 364.587 kb on + strand at 364.587 kb on + strand at 364.588 kb on - strand at 364.588 kb on - strand at 364.588 kb on - strand at 364.588 kb on - strand at 364.596 kb on + strand at 364.606 kb on + strand at 364.606 kb on + strand at 364.606 kb on + strand at 364.607 kb on - strand at 364.607 kb on - strand at 364.607 kb on - strand at 364.742 kb on + strand at 364.742 kb on + strand at 364.742 kb on + strand at 364.742 kb on + strand at 364.743 kb on - strand at 364.743 kb on - strand at 364.743 kb on - strand at 364.743 kb on - strand at 364.743 kb on - strand at 364.743 kb on - strand at 364.743 kb on - strand at 364.743 kb on - strand at 364.743 kb on - strand at 364.743 kb on - strand at 364.790 kb on + strand at 364.790 kb on + strand at 364.790 kb on + strand at 364.790 kb on + strand at 364.790 kb on + strand at 364.790 kb on + strand at 364.790 kb on + strand at 364.790 kb on + strand at 364.791 kb on - strand at 364.791 kb on - strand at 364.791 kb on - strand at 364.791 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C), 30C remove 362,218 + A4249_RS16195 0.89 +0.3 362,218 + A4249_RS16195 0.89 +1.6 362,218 + A4249_RS16195 0.89 -0.3 362,218 + A4249_RS16195 0.89 -0.7 362,219 - A4249_RS16195 0.89 +0.3 362,239 + A4249_RS16195 0.89 +0.0 362,260 + A4249_RS16195 0.89 +0.5 362,260 + A4249_RS16195 0.89 +0.3 362,260 + A4249_RS16195 0.89 +0.2 362,260 + A4249_RS16195 0.89 +0.4 362,260 + A4249_RS16195 0.89 +0.2 362,261 - A4249_RS16195 0.89 +0.3 362,261 - A4249_RS16195 0.89 +0.1 362,261 - A4249_RS16195 0.89 +1.9 362,261 - A4249_RS16195 0.89 +0.3 362,261 - A4249_RS16195 0.89 +0.7 362,287 + +0.5 362,287 + +0.3 362,287 + +0.0 362,288 - -0.7 362,288 - +0.3 362,288 - +0.3 362,305 + +1.9 362,305 + -0.0 362,305 + -1.0 362,306 - +3.3 362,306 - -1.5 362,306 - -0.1 362,306 - -1.3 362,306 - -0.8 362,306 - -0.5 362,306 - +1.5 362,306 - +1.2 362,311 + -0.7 362,311 + -0.1 362,311 + -1.9 362,311 + +1.7 362,311 + -0.1 362,311 + +0.3 362,311 + -0.7 362,311 + +0.4 362,311 + -0.0 362,311 + -0.2 362,311 + +0.9 362,311 + -0.0 362,312 - -0.7 362,312 - -0.3 362,312 - -0.4 362,312 - +1.3 362,312 - +0.1 362,312 - +0.9 362,312 - -0.1 362,312 - -0.4 362,312 - -0.7 362,312 - -0.3 362,336 + +0.3 362,337 - +0.9 362,425 + -0.3 362,426 - +0.3 362,426 - +0.6 362,505 + -0.9 362,505 + -0.7 362,505 + -2.6 362,505 + -0.7 362,505 + -0.5 362,505 + -0.1 362,505 + -1.4 362,505 + +0.7 362,505 + +0.3 362,506 - +2.9 362,506 - +0.3 362,506 - -0.3 362,506 - -0.6 362,506 - +0.0 362,506 - +0.3 362,506 - +0.7 362,506 - -0.7 362,506 - -1.7 362,510 + -0.4 362,510 + -2.1 362,511 - -0.7 362,511 - +1.0 362,620 + -0.8 362,621 - +0.3 362,676 + -0.7 362,676 + +0.6 362,677 - -1.1 362,677 - -0.1 362,677 - -0.9 362,712 + -0.0 362,712 + +0.6 362,712 + -2.7 362,734 + -0.5 362,735 - -0.1 362,764 + -1.4 362,884 + A4249_RS01845 0.45 -1.3 363,119 - +0.5 363,243 + A4249_RS01850 0.12 -1.3 363,243 + A4249_RS01850 0.12 -1.3 363,243 + A4249_RS01850 0.12 -0.3 363,243 + A4249_RS01850 0.12 -0.1 363,243 + A4249_RS01850 0.12 -0.8 363,243 + A4249_RS01850 0.12 +0.2 363,243 + A4249_RS01850 0.12 +1.3 363,244 - A4249_RS01850 0.12 -1.0 363,244 - A4249_RS01850 0.12 -2.3 363,255 + A4249_RS01850 0.14 +0.3 363,255 + A4249_RS01850 0.14 -0.2 363,255 + A4249_RS01850 0.14 +0.3 363,255 + A4249_RS01850 0.14 +0.1 363,255 + A4249_RS01850 0.14 +0.8 363,255 + A4249_RS01850 0.14 -0.9 363,256 - A4249_RS01850 0.14 +0.1 363,256 - A4249_RS01850 0.14 +0.1 363,256 - A4249_RS01850 0.14 -2.9 363,256 - A4249_RS01850 0.14 -0.3 363,256 - A4249_RS01850 0.14 +0.4 363,429 + A4249_RS01850 0.39 -0.3 363,430 - A4249_RS01850 0.39 -0.5 363,714 + A4249_RS01850 0.80 -1.3 363,714 + A4249_RS01850 0.80 +0.6 363,714 + A4249_RS01850 0.80 +0.8 363,714 + A4249_RS01850 0.80 +1.0 363,714 + A4249_RS01850 0.80 +1.3 363,714 + A4249_RS01850 0.80 -0.1 363,715 - A4249_RS01850 0.80 -0.3 363,715 - A4249_RS01850 0.80 -0.4 363,743 + A4249_RS01850 0.84 -0.7 363,744 - A4249_RS01850 0.85 +0.3 363,744 - A4249_RS01850 0.85 -0.4 363,744 - A4249_RS01850 0.85 -0.3 363,744 - A4249_RS01850 0.85 -1.7 363,744 - A4249_RS01850 0.85 +0.3 363,783 + -0.1 363,783 + +0.3 363,783 + +1.9 363,784 - +1.3 363,784 - +0.3 363,784 - +0.3 363,839 + +0.3 363,840 - +0.7 363,840 - +1.5 363,867 + -3.5 363,875 + +0.9 363,875 + +0.3 363,875 + +1.7 363,875 + +1.1 363,876 - -0.0 363,901 + -1.0 363,901 + +0.2 363,901 + -2.7 363,902 - +0.1 363,902 - +0.5 363,907 + -0.4 363,907 + +0.2 363,907 + -1.4 363,908 - -1.3 363,908 - -1.7 363,973 - +0.8 364,017 + -0.1 364,114 + +0.2 364,114 + -0.4 364,114 + -1.0 364,115 - +0.1 364,123 + +0.5 364,124 - +1.8 364,124 - -0.3 364,158 + A4249_RS01855 0.15 -0.0 364,158 + A4249_RS01855 0.15 +0.6 364,158 + A4249_RS01855 0.15 +0.3 364,158 + A4249_RS01855 0.15 +1.6 364,159 - A4249_RS01855 0.15 -1.3 364,164 + A4249_RS01855 0.16 +0.4 364,164 + A4249_RS01855 0.16 -0.8 364,164 + A4249_RS01855 0.16 +0.6 364,164 + A4249_RS01855 0.16 -2.2 364,165 - A4249_RS01855 0.16 -0.3 364,165 - A4249_RS01855 0.16 +0.1 364,165 - A4249_RS01855 0.16 -0.3 364,165 - A4249_RS01855 0.16 -0.5 364,165 - A4249_RS01855 0.16 -0.1 364,165 - A4249_RS01855 0.16 +0.9 364,165 - A4249_RS01855 0.16 -0.3 364,183 + A4249_RS01855 0.19 +1.6 364,184 - A4249_RS01855 0.19 -0.6 364,184 - A4249_RS01855 0.19 +0.3 364,197 - A4249_RS01855 0.22 +0.4 364,197 - A4249_RS01855 0.22 -1.7 364,197 - A4249_RS01855 0.22 -0.5 364,197 - A4249_RS01855 0.22 +1.2 364,209 - A4249_RS01855 0.24 -1.4 364,209 - A4249_RS01855 0.24 +0.8 364,209 - A4249_RS01855 0.24 -1.3 364,209 - A4249_RS01855 0.24 -0.2 364,230 + A4249_RS01855 0.27 +0.3 364,230 + A4249_RS01855 0.27 +0.7 364,230 + A4249_RS01855 0.27 -0.6 364,230 + A4249_RS01855 0.27 -0.1 364,283 + A4249_RS01855 0.37 -0.0 364,283 + A4249_RS01855 0.37 +0.5 364,283 + A4249_RS01855 0.37 -0.1 364,284 - A4249_RS01855 0.37 +0.2 364,284 - A4249_RS01855 0.37 -0.1 364,295 + A4249_RS01855 0.39 +0.3 364,296 - A4249_RS01855 0.39 +0.2 364,307 - A4249_RS01855 0.41 +0.1 364,404 + A4249_RS01855 0.59 -1.6 364,404 + A4249_RS01855 0.59 -1.5 364,404 + A4249_RS01855 0.59 +0.6 364,404 + A4249_RS01855 0.59 +1.3 364,404 + A4249_RS01855 0.59 +0.3 364,404 + A4249_RS01855 0.59 +0.4 364,404 + A4249_RS01855 0.59 -0.4 364,404 + A4249_RS01855 0.59 -0.4 364,405 - A4249_RS01855 0.59 +0.2 364,405 - A4249_RS01855 0.59 +0.1 364,405 - A4249_RS01855 0.59 +0.3 364,405 - A4249_RS01855 0.59 -0.7 364,441 - A4249_RS01855 0.65 +0.3 364,494 + A4249_RS01855 0.75 +1.3 364,494 + A4249_RS01855 0.75 -1.1 364,494 + A4249_RS01855 0.75 +0.3 364,494 + A4249_RS01855 0.75 +0.6 364,495 - A4249_RS01855 0.75 +0.0 364,495 - A4249_RS01855 0.75 +0.7 364,495 - A4249_RS01855 0.75 +1.6 364,495 - A4249_RS01855 0.75 +0.3 364,587 + -0.1 364,587 + +0.3 364,587 + -1.9 364,587 + -1.7 364,587 + +0.5 364,588 - +0.6 364,588 - +0.4 364,588 - -0.1 364,588 - -1.5 364,596 + +1.3 364,606 + -0.6 364,606 + +0.3 364,606 + +0.8 364,607 - -2.3 364,607 - +0.1 364,607 - -0.3 364,742 + -0.7 364,742 + -0.8 364,742 + -0.0 364,742 + +1.9 364,743 - -0.9 364,743 - +1.5 364,743 - +0.3 364,743 - -0.3 364,743 - +0.1 364,743 - +0.3 364,743 - -0.4 364,743 - -0.2 364,743 - +0.6 364,743 - -0.1 364,790 + -0.9 364,790 + -0.8 364,790 + -0.2 364,790 + +0.3 364,790 + +0.3 364,790 + +0.0 364,790 + -0.0 364,790 + +0.2 364,791 - +0.6 364,791 - -1.0 364,791 - +1.3 364,791 - -0.4
Or see this region's nucleotide sequence