Experiment: Tween 20 (C), 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS00375 and A4249_RS00380 are separated by 3 nucleotides A4249_RS00380 and A4249_RS00385 are separated by 189 nucleotides A4249_RS00385 and A4249_RS00390 are separated by 210 nucleotides
A4249_RS00375: A4249_RS00375 - acyl-CoA dehydrogenase C-terminal domain-containing protein, at 62,833 to 64,617
_RS00375
A4249_RS00380: A4249_RS00380 - MerR family DNA-binding transcriptional regulator, at 64,621 to 65,103
_RS00380
A4249_RS00385: A4249_RS00385 - DoxX family protein, at 65,293 to 65,709
_RS00385
A4249_RS00390: A4249_RS00390 - helix-turn-helix transcriptional regulator, at 65,920 to 66,138
_RS00390
Position (kb) 64
65
66 Strain fitness (log2 ratio) -7
-6
-5
-4
-3
-2
-1
0
1
2 at 63.690 kb on - strand, within A4249_RS00375 at 63.690 kb on - strand, within A4249_RS00375 at 63.759 kb on + strand, within A4249_RS00375 at 63.759 kb on + strand, within A4249_RS00375 at 63.759 kb on + strand, within A4249_RS00375 at 63.759 kb on + strand, within A4249_RS00375 at 63.759 kb on + strand, within A4249_RS00375 at 63.759 kb on + strand, within A4249_RS00375 at 63.759 kb on + strand, within A4249_RS00375 at 63.759 kb on + strand, within A4249_RS00375 at 63.759 kb on + strand, within A4249_RS00375 at 63.759 kb on + strand, within A4249_RS00375 at 63.759 kb on + strand, within A4249_RS00375 at 63.759 kb on + strand, within A4249_RS00375 at 63.759 kb on + strand, within A4249_RS00375 at 63.759 kb on + strand, within A4249_RS00375 at 63.759 kb on + strand, within A4249_RS00375 at 63.760 kb on - strand, within A4249_RS00375 at 63.760 kb on - strand, within A4249_RS00375 at 63.760 kb on - strand, within A4249_RS00375 at 63.760 kb on - strand, within A4249_RS00375 at 63.760 kb on - strand, within A4249_RS00375 at 63.760 kb on - strand, within A4249_RS00375 at 63.760 kb on - strand, within A4249_RS00375 at 63.760 kb on - strand, within A4249_RS00375 at 63.760 kb on - strand, within A4249_RS00375 at 63.760 kb on - strand, within A4249_RS00375 at 63.760 kb on - strand, within A4249_RS00375 at 63.760 kb on - strand, within A4249_RS00375 at 63.760 kb on - strand, within A4249_RS00375 at 63.760 kb on - strand, within A4249_RS00375 at 63.760 kb on - strand, within A4249_RS00375 at 63.760 kb on - strand, within A4249_RS00375 at 63.812 kb on + strand, within A4249_RS00375 at 64.055 kb on + strand, within A4249_RS00375 at 64.055 kb on + strand, within A4249_RS00375 at 64.055 kb on + strand, within A4249_RS00375 at 64.056 kb on - strand, within A4249_RS00375 at 64.056 kb on - strand, within A4249_RS00375 at 64.172 kb on + strand, within A4249_RS00375 at 64.172 kb on + strand, within A4249_RS00375 at 64.172 kb on + strand, within A4249_RS00375 at 64.172 kb on + strand, within A4249_RS00375 at 64.172 kb on + strand, within A4249_RS00375 at 64.172 kb on + strand, within A4249_RS00375 at 64.172 kb on + strand, within A4249_RS00375 at 64.173 kb on - strand, within A4249_RS00375 at 64.173 kb on - strand, within A4249_RS00375 at 64.173 kb on - strand, within A4249_RS00375 at 64.173 kb on - strand, within A4249_RS00375 at 64.173 kb on - strand, within A4249_RS00375 at 64.217 kb on + strand, within A4249_RS00375 at 64.218 kb on - strand, within A4249_RS00375 at 64.241 kb on + strand, within A4249_RS00375 at 64.241 kb on + strand, within A4249_RS00375 at 64.242 kb on - strand, within A4249_RS00375 at 64.242 kb on - strand, within A4249_RS00375 at 64.242 kb on - strand, within A4249_RS00375 at 64.242 kb on - strand, within A4249_RS00375 at 64.242 kb on - strand, within A4249_RS00375 at 64.323 kb on - strand, within A4249_RS00375 at 64.373 kb on + strand, within A4249_RS00375 at 64.373 kb on + strand, within A4249_RS00375 at 64.373 kb on + strand, within A4249_RS00375 at 64.373 kb on + strand, within A4249_RS00375 at 64.373 kb on + strand, within A4249_RS00375 at 64.374 kb on - strand, within A4249_RS00375 at 64.374 kb on - strand, within A4249_RS00375 at 64.374 kb on - strand, within A4249_RS00375 at 64.374 kb on - strand, within A4249_RS00375 at 64.374 kb on - strand, within A4249_RS00375 at 64.374 kb on - strand, within A4249_RS00375 at 64.374 kb on - strand, within A4249_RS00375 at 64.550 kb on + strand at 64.551 kb on - strand at 64.551 kb on - strand at 64.551 kb on - strand at 64.551 kb on - strand at 64.610 kb on + strand at 64.610 kb on + strand at 64.610 kb on + strand at 64.610 kb on + strand at 64.611 kb on - strand at 64.611 kb on - strand at 64.611 kb on - strand at 64.611 kb on - strand at 64.611 kb on - strand at 64.622 kb on + strand at 64.622 kb on + strand at 64.622 kb on + strand at 64.623 kb on - strand at 64.623 kb on - strand at 64.623 kb on - strand at 64.623 kb on - strand at 64.685 kb on + strand, within A4249_RS00380 at 64.685 kb on + strand, within A4249_RS00380 at 64.685 kb on + strand, within A4249_RS00380 at 64.685 kb on + strand, within A4249_RS00380 at 64.685 kb on + strand, within A4249_RS00380 at 64.685 kb on + strand, within A4249_RS00380 at 64.686 kb on - strand, within A4249_RS00380 at 64.686 kb on - strand, within A4249_RS00380 at 64.686 kb on - strand, within A4249_RS00380 at 64.686 kb on - strand, within A4249_RS00380 at 64.874 kb on + strand, within A4249_RS00380 at 64.874 kb on + strand, within A4249_RS00380 at 64.875 kb on - strand, within A4249_RS00380 at 64.875 kb on - strand, within A4249_RS00380 at 64.968 kb on - strand, within A4249_RS00380 at 64.968 kb on - strand, within A4249_RS00380 at 64.968 kb on - strand, within A4249_RS00380 at 64.968 kb on - strand, within A4249_RS00380 at 64.968 kb on - strand, within A4249_RS00380 at 65.018 kb on + strand, within A4249_RS00380 at 65.018 kb on + strand, within A4249_RS00380 at 65.019 kb on - strand, within A4249_RS00380 at 65.019 kb on - strand, within A4249_RS00380 at 65.019 kb on - strand, within A4249_RS00380 at 65.075 kb on + strand at 65.075 kb on + strand at 65.075 kb on + strand at 65.075 kb on + strand at 65.103 kb on + strand at 65.103 kb on + strand at 65.103 kb on + strand at 65.103 kb on + strand at 65.103 kb on + strand at 65.104 kb on - strand at 65.104 kb on - strand at 65.104 kb on - strand at 65.104 kb on - strand at 65.104 kb on - strand at 65.104 kb on - strand at 65.104 kb on - strand at 65.154 kb on + strand at 65.155 kb on - strand at 65.155 kb on - strand at 65.598 kb on - strand, within A4249_RS00385 at 65.661 kb on - strand, within A4249_RS00385 at 65.787 kb on + strand at 65.787 kb on + strand at 65.787 kb on + strand at 65.787 kb on + strand at 65.787 kb on + strand at 65.787 kb on + strand at 65.787 kb on + strand at 65.787 kb on + strand at 65.787 kb on + strand at 65.788 kb on - strand at 65.788 kb on - strand at 65.788 kb on - strand at 65.788 kb on - strand at 65.788 kb on - strand at 65.789 kb on + strand at 65.789 kb on + strand at 65.789 kb on + strand at 65.789 kb on + strand at 65.790 kb on - strand at 65.790 kb on - strand at 65.790 kb on - strand at 65.790 kb on - strand at 65.791 kb on + strand at 65.791 kb on + strand at 65.791 kb on + strand at 65.791 kb on + strand at 65.791 kb on + strand at 65.792 kb on - strand at 65.792 kb on - strand at 65.792 kb on - strand at 65.792 kb on - strand at 65.792 kb on - strand at 65.792 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C), 30C remove 63,690 - A4249_RS00375 0.48 -6.9 63,690 - A4249_RS00375 0.48 -5.3 63,759 + A4249_RS00375 0.52 -5.7 63,759 + A4249_RS00375 0.52 -3.2 63,759 + A4249_RS00375 0.52 -2.6 63,759 + A4249_RS00375 0.52 -4.7 63,759 + A4249_RS00375 0.52 -5.5 63,759 + A4249_RS00375 0.52 -5.2 63,759 + A4249_RS00375 0.52 -5.3 63,759 + A4249_RS00375 0.52 -4.7 63,759 + A4249_RS00375 0.52 -4.2 63,759 + A4249_RS00375 0.52 -4.8 63,759 + A4249_RS00375 0.52 -6.9 63,759 + A4249_RS00375 0.52 -5.7 63,759 + A4249_RS00375 0.52 -5.6 63,759 + A4249_RS00375 0.52 -5.9 63,759 + A4249_RS00375 0.52 -3.7 63,760 - A4249_RS00375 0.52 -4.6 63,760 - A4249_RS00375 0.52 -5.2 63,760 - A4249_RS00375 0.52 -5.0 63,760 - A4249_RS00375 0.52 -4.7 63,760 - A4249_RS00375 0.52 -4.5 63,760 - A4249_RS00375 0.52 -4.7 63,760 - A4249_RS00375 0.52 -3.8 63,760 - A4249_RS00375 0.52 -5.2 63,760 - A4249_RS00375 0.52 -3.7 63,760 - A4249_RS00375 0.52 -6.5 63,760 - A4249_RS00375 0.52 -5.0 63,760 - A4249_RS00375 0.52 -4.9 63,760 - A4249_RS00375 0.52 -5.1 63,760 - A4249_RS00375 0.52 -5.7 63,760 - A4249_RS00375 0.52 -5.1 63,760 - A4249_RS00375 0.52 -4.7 63,812 + A4249_RS00375 0.55 -4.8 64,055 + A4249_RS00375 0.68 -4.9 64,055 + A4249_RS00375 0.68 -3.3 64,055 + A4249_RS00375 0.68 -5.6 64,056 - A4249_RS00375 0.69 -4.8 64,056 - A4249_RS00375 0.69 -4.0 64,172 + A4249_RS00375 0.75 -3.1 64,172 + A4249_RS00375 0.75 -4.1 64,172 + A4249_RS00375 0.75 -3.6 64,172 + A4249_RS00375 0.75 -4.2 64,172 + A4249_RS00375 0.75 -3.1 64,172 + A4249_RS00375 0.75 -3.6 64,172 + A4249_RS00375 0.75 -5.6 64,173 - A4249_RS00375 0.75 -6.2 64,173 - A4249_RS00375 0.75 -4.6 64,173 - A4249_RS00375 0.75 -5.2 64,173 - A4249_RS00375 0.75 -5.6 64,173 - A4249_RS00375 0.75 -3.3 64,217 + A4249_RS00375 0.78 -4.9 64,218 - A4249_RS00375 0.78 -3.7 64,241 + A4249_RS00375 0.79 -3.7 64,241 + A4249_RS00375 0.79 -4.5 64,242 - A4249_RS00375 0.79 -5.2 64,242 - A4249_RS00375 0.79 -4.8 64,242 - A4249_RS00375 0.79 -4.5 64,242 - A4249_RS00375 0.79 -4.3 64,242 - A4249_RS00375 0.79 -3.6 64,323 - A4249_RS00375 0.83 -5.3 64,373 + A4249_RS00375 0.86 -4.9 64,373 + A4249_RS00375 0.86 -4.6 64,373 + A4249_RS00375 0.86 -4.3 64,373 + A4249_RS00375 0.86 -4.5 64,373 + A4249_RS00375 0.86 -4.6 64,374 - A4249_RS00375 0.86 -5.3 64,374 - A4249_RS00375 0.86 -5.2 64,374 - A4249_RS00375 0.86 -5.7 64,374 - A4249_RS00375 0.86 -3.2 64,374 - A4249_RS00375 0.86 -5.6 64,374 - A4249_RS00375 0.86 -4.1 64,374 - A4249_RS00375 0.86 -5.7 64,550 + -4.8 64,551 - -3.2 64,551 - -6.1 64,551 - -4.1 64,551 - -4.9 64,610 + -4.9 64,610 + -4.7 64,610 + -2.2 64,610 + -3.3 64,611 - -4.3 64,611 - -5.1 64,611 - -4.3 64,611 - -4.9 64,611 - -5.1 64,622 + -4.8 64,622 + -4.9 64,622 + -4.0 64,623 - -3.4 64,623 - -2.8 64,623 - -4.4 64,623 - -3.3 64,685 + A4249_RS00380 0.13 -1.5 64,685 + A4249_RS00380 0.13 -2.0 64,685 + A4249_RS00380 0.13 -0.7 64,685 + A4249_RS00380 0.13 -2.0 64,685 + A4249_RS00380 0.13 -0.7 64,685 + A4249_RS00380 0.13 -0.4 64,686 - A4249_RS00380 0.13 -0.4 64,686 - A4249_RS00380 0.13 -2.0 64,686 - A4249_RS00380 0.13 +1.1 64,686 - A4249_RS00380 0.13 +1.4 64,874 + A4249_RS00380 0.52 -3.0 64,874 + A4249_RS00380 0.52 -1.2 64,875 - A4249_RS00380 0.53 -3.9 64,875 - A4249_RS00380 0.53 -1.2 64,968 - A4249_RS00380 0.72 -4.0 64,968 - A4249_RS00380 0.72 -1.2 64,968 - A4249_RS00380 0.72 -3.3 64,968 - A4249_RS00380 0.72 +0.4 64,968 - A4249_RS00380 0.72 -2.0 65,018 + A4249_RS00380 0.82 -3.5 65,018 + A4249_RS00380 0.82 -2.4 65,019 - A4249_RS00380 0.82 -1.2 65,019 - A4249_RS00380 0.82 -3.6 65,019 - A4249_RS00380 0.82 -2.8 65,075 + -3.0 65,075 + -2.2 65,075 + -1.2 65,075 + -1.2 65,103 + +0.4 65,103 + -0.6 65,103 + -3.4 65,103 + -2.2 65,103 + -3.3 65,104 - +0.4 65,104 - -4.1 65,104 - -1.6 65,104 - -2.1 65,104 - -2.0 65,104 - -3.1 65,104 - -1.2 65,154 + +0.2 65,155 - +1.4 65,155 - +0.0 65,598 - A4249_RS00385 0.73 -2.3 65,661 - A4249_RS00385 0.88 -1.6 65,787 + -0.2 65,787 + +1.1 65,787 + +0.9 65,787 + -1.6 65,787 + -0.8 65,787 + -1.0 65,787 + +0.4 65,787 + -0.1 65,787 + -0.2 65,788 - +0.4 65,788 - -0.5 65,788 - +1.2 65,788 - +0.3 65,788 - -0.1 65,789 + +0.0 65,789 + +0.4 65,789 + -0.8 65,789 + -0.8 65,790 - -1.5 65,790 - +0.2 65,790 - +0.2 65,790 - +0.0 65,791 + +1.6 65,791 + -1.2 65,791 + +1.9 65,791 + +1.2 65,791 + +1.9 65,792 - +0.7 65,792 - -0.6 65,792 - -0.4 65,792 - +0.8 65,792 - +0.6 65,792 - -0.4
Or see this region's nucleotide sequence