Experiment: Tween 20 (C), 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS00185 and A4249_RS00190 are separated by 165 nucleotides A4249_RS00190 and A4249_RS00195 overlap by 4 nucleotides
A4249_RS00185: A4249_RS00185 - SulP family inorganic anion transporter, at 30,069 to 31,553
_RS00185
A4249_RS00190: A4249_RS00190 - DUF1501 domain-containing protein, at 31,719 to 32,900
_RS00190
A4249_RS00195: A4249_RS00195 - DUF1800 domain-containing protein, at 32,897 to 34,393
_RS00195
Position (kb) 31
32
33 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 31.075 kb on + strand, within A4249_RS00185 at 31.075 kb on + strand, within A4249_RS00185 at 31.075 kb on + strand, within A4249_RS00185 at 31.076 kb on - strand, within A4249_RS00185 at 31.108 kb on + strand, within A4249_RS00185 at 31.108 kb on + strand, within A4249_RS00185 at 31.108 kb on + strand, within A4249_RS00185 at 31.108 kb on + strand, within A4249_RS00185 at 31.108 kb on + strand, within A4249_RS00185 at 31.108 kb on + strand, within A4249_RS00185 at 31.108 kb on + strand, within A4249_RS00185 at 31.109 kb on - strand, within A4249_RS00185 at 31.109 kb on - strand, within A4249_RS00185 at 31.109 kb on - strand, within A4249_RS00185 at 31.109 kb on - strand, within A4249_RS00185 at 31.109 kb on - strand, within A4249_RS00185 at 31.216 kb on + strand, within A4249_RS00185 at 31.216 kb on + strand, within A4249_RS00185 at 31.217 kb on - strand, within A4249_RS00185 at 31.217 kb on - strand, within A4249_RS00185 at 31.217 kb on - strand, within A4249_RS00185 at 31.285 kb on + strand, within A4249_RS00185 at 31.285 kb on + strand, within A4249_RS00185 at 31.286 kb on - strand, within A4249_RS00185 at 31.286 kb on - strand, within A4249_RS00185 at 31.286 kb on - strand, within A4249_RS00185 at 31.286 kb on - strand, within A4249_RS00185 at 31.286 kb on - strand, within A4249_RS00185 at 31.286 kb on - strand, within A4249_RS00185 at 31.286 kb on - strand, within A4249_RS00185 at 31.286 kb on - strand, within A4249_RS00185 at 31.408 kb on + strand at 31.409 kb on - strand at 31.409 kb on - strand at 31.579 kb on + strand at 31.720 kb on + strand at 31.720 kb on + strand at 31.721 kb on - strand at 31.721 kb on - strand at 31.721 kb on - strand at 31.838 kb on + strand, within A4249_RS00190 at 32.317 kb on + strand, within A4249_RS00190 at 32.317 kb on + strand, within A4249_RS00190 at 32.317 kb on + strand, within A4249_RS00190 at 32.317 kb on + strand, within A4249_RS00190 at 32.317 kb on + strand, within A4249_RS00190 at 32.317 kb on + strand, within A4249_RS00190 at 32.317 kb on + strand, within A4249_RS00190 at 32.317 kb on + strand, within A4249_RS00190 at 32.317 kb on + strand, within A4249_RS00190 at 32.317 kb on + strand, within A4249_RS00190 at 32.318 kb on - strand, within A4249_RS00190 at 32.318 kb on - strand, within A4249_RS00190 at 32.318 kb on - strand, within A4249_RS00190 at 32.318 kb on - strand, within A4249_RS00190 at 32.318 kb on - strand, within A4249_RS00190 at 32.318 kb on - strand, within A4249_RS00190 at 32.318 kb on - strand, within A4249_RS00190 at 32.318 kb on - strand, within A4249_RS00190 at 32.318 kb on - strand, within A4249_RS00190 at 32.318 kb on - strand, within A4249_RS00190 at 32.605 kb on + strand, within A4249_RS00190 at 32.605 kb on + strand, within A4249_RS00190 at 32.605 kb on + strand, within A4249_RS00190 at 32.606 kb on - strand, within A4249_RS00190 at 32.719 kb on + strand, within A4249_RS00190 at 32.719 kb on + strand, within A4249_RS00190 at 32.719 kb on + strand, within A4249_RS00190 at 32.719 kb on + strand, within A4249_RS00190 at 32.719 kb on + strand, within A4249_RS00190 at 32.719 kb on + strand, within A4249_RS00190 at 32.720 kb on - strand, within A4249_RS00190 at 33.455 kb on + strand, within A4249_RS00195 at 33.455 kb on + strand, within A4249_RS00195 at 33.455 kb on + strand, within A4249_RS00195 at 33.456 kb on - strand, within A4249_RS00195 at 33.456 kb on - strand, within A4249_RS00195 at 33.456 kb on - strand, within A4249_RS00195 at 33.489 kb on + strand, within A4249_RS00195 at 33.489 kb on + strand, within A4249_RS00195 at 33.490 kb on - strand, within A4249_RS00195 at 33.490 kb on - strand, within A4249_RS00195 at 33.580 kb on + strand, within A4249_RS00195 at 33.581 kb on - strand, within A4249_RS00195 at 33.581 kb on - strand, within A4249_RS00195 at 33.581 kb on - strand, within A4249_RS00195 at 33.682 kb on + strand, within A4249_RS00195 at 33.682 kb on + strand, within A4249_RS00195 at 33.682 kb on + strand, within A4249_RS00195 at 33.682 kb on + strand, within A4249_RS00195 at 33.682 kb on + strand, within A4249_RS00195 at 33.683 kb on - strand, within A4249_RS00195 at 33.683 kb on - strand, within A4249_RS00195 at 33.683 kb on - strand, within A4249_RS00195 at 33.685 kb on - strand, within A4249_RS00195 at 33.807 kb on + strand, within A4249_RS00195 at 33.807 kb on + strand, within A4249_RS00195 at 33.808 kb on - strand, within A4249_RS00195 at 33.895 kb on - strand, within A4249_RS00195
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C), 30C remove 31,075 + A4249_RS00185 0.68 +0.5 31,075 + A4249_RS00185 0.68 -0.1 31,075 + A4249_RS00185 0.68 -0.1 31,076 - A4249_RS00185 0.68 -0.1 31,108 + A4249_RS00185 0.70 -2.4 31,108 + A4249_RS00185 0.70 +1.2 31,108 + A4249_RS00185 0.70 -0.2 31,108 + A4249_RS00185 0.70 +0.9 31,108 + A4249_RS00185 0.70 +0.4 31,108 + A4249_RS00185 0.70 -1.0 31,108 + A4249_RS00185 0.70 +1.9 31,109 - A4249_RS00185 0.70 -1.2 31,109 - A4249_RS00185 0.70 -0.5 31,109 - A4249_RS00185 0.70 +1.4 31,109 - A4249_RS00185 0.70 -2.2 31,109 - A4249_RS00185 0.70 -0.1 31,216 + A4249_RS00185 0.77 +0.2 31,216 + A4249_RS00185 0.77 -1.5 31,217 - A4249_RS00185 0.77 +2.2 31,217 - A4249_RS00185 0.77 -0.1 31,217 - A4249_RS00185 0.77 -0.2 31,285 + A4249_RS00185 0.82 -0.6 31,285 + A4249_RS00185 0.82 +0.3 31,286 - A4249_RS00185 0.82 -0.8 31,286 - A4249_RS00185 0.82 +0.3 31,286 - A4249_RS00185 0.82 -1.2 31,286 - A4249_RS00185 0.82 +0.4 31,286 - A4249_RS00185 0.82 -0.5 31,286 - A4249_RS00185 0.82 -0.6 31,286 - A4249_RS00185 0.82 -0.6 31,286 - A4249_RS00185 0.82 +1.0 31,408 + +0.2 31,409 - -0.4 31,409 - -0.9 31,579 + +0.5 31,720 + +0.9 31,720 + +0.4 31,721 - -0.1 31,721 - -0.2 31,721 - +0.4 31,838 + A4249_RS00190 0.10 +0.9 32,317 + A4249_RS00190 0.51 +0.5 32,317 + A4249_RS00190 0.51 -1.6 32,317 + A4249_RS00190 0.51 -1.0 32,317 + A4249_RS00190 0.51 -0.1 32,317 + A4249_RS00190 0.51 +2.4 32,317 + A4249_RS00190 0.51 +0.3 32,317 + A4249_RS00190 0.51 +2.0 32,317 + A4249_RS00190 0.51 +0.9 32,317 + A4249_RS00190 0.51 +0.3 32,317 + A4249_RS00190 0.51 +1.2 32,318 - A4249_RS00190 0.51 -0.6 32,318 - A4249_RS00190 0.51 -0.1 32,318 - A4249_RS00190 0.51 -0.3 32,318 - A4249_RS00190 0.51 +1.7 32,318 - A4249_RS00190 0.51 +0.3 32,318 - A4249_RS00190 0.51 +0.3 32,318 - A4249_RS00190 0.51 -0.2 32,318 - A4249_RS00190 0.51 -0.3 32,318 - A4249_RS00190 0.51 -0.4 32,318 - A4249_RS00190 0.51 -0.8 32,605 + A4249_RS00190 0.75 +0.1 32,605 + A4249_RS00190 0.75 +0.0 32,605 + A4249_RS00190 0.75 +0.1 32,606 - A4249_RS00190 0.75 -0.3 32,719 + A4249_RS00190 0.85 -1.0 32,719 + A4249_RS00190 0.85 +1.5 32,719 + A4249_RS00190 0.85 +0.8 32,719 + A4249_RS00190 0.85 -0.5 32,719 + A4249_RS00190 0.85 +0.7 32,719 + A4249_RS00190 0.85 +0.1 32,720 - A4249_RS00190 0.85 -0.2 33,455 + A4249_RS00195 0.37 -1.5 33,455 + A4249_RS00195 0.37 +0.0 33,455 + A4249_RS00195 0.37 -0.6 33,456 - A4249_RS00195 0.37 -0.0 33,456 - A4249_RS00195 0.37 +0.4 33,456 - A4249_RS00195 0.37 -1.0 33,489 + A4249_RS00195 0.40 -0.6 33,489 + A4249_RS00195 0.40 +0.6 33,490 - A4249_RS00195 0.40 +1.9 33,490 - A4249_RS00195 0.40 -0.5 33,580 + A4249_RS00195 0.46 -0.1 33,581 - A4249_RS00195 0.46 -1.0 33,581 - A4249_RS00195 0.46 +0.5 33,581 - A4249_RS00195 0.46 +3.4 33,682 + A4249_RS00195 0.52 -0.2 33,682 + A4249_RS00195 0.52 -1.2 33,682 + A4249_RS00195 0.52 -3.1 33,682 + A4249_RS00195 0.52 -2.0 33,682 + A4249_RS00195 0.52 +0.5 33,683 - A4249_RS00195 0.53 -1.6 33,683 - A4249_RS00195 0.53 +0.9 33,683 - A4249_RS00195 0.53 +0.1 33,685 - A4249_RS00195 0.53 -0.9 33,807 + A4249_RS00195 0.61 -0.8 33,807 + A4249_RS00195 0.61 +1.9 33,808 - A4249_RS00195 0.61 +0.8 33,895 - A4249_RS00195 0.67 -0.9
Or see this region's nucleotide sequence