Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS16165

Experiment: D-Glucose (C); 30C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS16160 and A4249_RS16165 overlap by 4 nucleotides A4249_RS16160: A4249_RS16160 - cystathionine gamma-synthase, at 3,260,922 to 3,262,103 _RS16160 A4249_RS16165: A4249_RS16165 - homoserine O-succinyltransferase, at 3,262,100 to 3,263,152 _RS16165 Position (kb) 3262 3263 3264Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 3261.235 kb on - strand, within A4249_RS16160at 3261.354 kb on + strand, within A4249_RS16160at 3261.355 kb on - strand, within A4249_RS16160at 3261.355 kb on - strand, within A4249_RS16160at 3261.355 kb on - strand, within A4249_RS16160at 3261.382 kb on + strand, within A4249_RS16160at 3261.383 kb on - strand, within A4249_RS16160at 3261.383 kb on - strand, within A4249_RS16160at 3261.383 kb on - strand, within A4249_RS16160at 3261.383 kb on - strand, within A4249_RS16160at 3261.656 kb on + strand, within A4249_RS16160at 3261.656 kb on + strand, within A4249_RS16160at 3261.656 kb on + strand, within A4249_RS16160at 3261.656 kb on + strand, within A4249_RS16160at 3261.656 kb on + strand, within A4249_RS16160at 3261.656 kb on + strand, within A4249_RS16160at 3261.656 kb on + strand, within A4249_RS16160at 3261.657 kb on - strand, within A4249_RS16160at 3261.657 kb on - strand, within A4249_RS16160at 3261.657 kb on - strand, within A4249_RS16160at 3261.657 kb on - strand, within A4249_RS16160at 3261.657 kb on - strand, within A4249_RS16160at 3261.657 kb on - strand, within A4249_RS16160at 3261.657 kb on - strand, within A4249_RS16160at 3261.657 kb on - strand, within A4249_RS16160at 3261.657 kb on - strand, within A4249_RS16160at 3261.657 kb on - strand, within A4249_RS16160at 3261.657 kb on - strand, within A4249_RS16160at 3261.657 kb on - strand, within A4249_RS16160at 3261.683 kb on + strand, within A4249_RS16160at 3261.683 kb on + strand, within A4249_RS16160at 3261.683 kb on + strand, within A4249_RS16160at 3261.683 kb on + strand, within A4249_RS16160at 3261.684 kb on - strand, within A4249_RS16160at 3261.684 kb on - strand, within A4249_RS16160at 3261.796 kb on + strand, within A4249_RS16160at 3261.797 kb on - strand, within A4249_RS16160at 3261.878 kb on + strand, within A4249_RS16160at 3261.958 kb on + strand, within A4249_RS16160at 3261.958 kb on + strand, within A4249_RS16160at 3261.958 kb on + strand, within A4249_RS16160at 3261.958 kb on + strand, within A4249_RS16160at 3261.958 kb on + strand, within A4249_RS16160at 3261.959 kb on - strand, within A4249_RS16160at 3261.959 kb on - strand, within A4249_RS16160at 3261.959 kb on - strand, within A4249_RS16160at 3261.959 kb on - strand, within A4249_RS16160at 3261.964 kb on + strand, within A4249_RS16160at 3261.964 kb on + strand, within A4249_RS16160at 3261.965 kb on - strand, within A4249_RS16160at 3261.965 kb on - strand, within A4249_RS16160at 3261.965 kb on - strand, within A4249_RS16160at 3261.965 kb on - strand, within A4249_RS16160at 3261.965 kb on - strand, within A4249_RS16160at 3261.965 kb on - strand, within A4249_RS16160at 3261.965 kb on - strand, within A4249_RS16160at 3261.997 kb on + strandat 3261.997 kb on + strandat 3261.997 kb on + strandat 3261.997 kb on + strandat 3261.997 kb on + strandat 3261.997 kb on + strandat 3261.998 kb on - strandat 3261.998 kb on - strandat 3261.998 kb on - strandat 3261.998 kb on - strandat 3261.998 kb on - strandat 3261.998 kb on - strandat 3261.998 kb on - strandat 3262.012 kb on + strandat 3262.012 kb on + strandat 3262.012 kb on + strandat 3262.012 kb on + strandat 3262.013 kb on - strandat 3262.013 kb on - strandat 3262.013 kb on - strandat 3262.013 kb on - strandat 3262.013 kb on - strandat 3262.013 kb on - strandat 3262.013 kb on - strandat 3262.050 kb on - strandat 3262.111 kb on + strandat 3262.111 kb on + strandat 3262.179 kb on + strandat 3262.180 kb on - strandat 3262.318 kb on + strand, within A4249_RS16165at 3262.319 kb on - strand, within A4249_RS16165at 3262.378 kb on - strand, within A4249_RS16165at 3262.401 kb on + strand, within A4249_RS16165at 3262.402 kb on - strand, within A4249_RS16165at 3262.483 kb on - strand, within A4249_RS16165at 3262.483 kb on - strand, within A4249_RS16165at 3262.863 kb on - strand, within A4249_RS16165at 3262.863 kb on - strand, within A4249_RS16165at 3262.984 kb on + strand, within A4249_RS16165at 3262.985 kb on - strand, within A4249_RS16165at 3263.319 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C); 30C
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3,261,235 - A4249_RS16160 0.26 -0.7
3,261,354 + A4249_RS16160 0.37 -1.4
3,261,355 - A4249_RS16160 0.37 -6.5
3,261,355 - A4249_RS16160 0.37 -1.7
3,261,355 - A4249_RS16160 0.37 -2.7
3,261,382 + A4249_RS16160 0.39 -4.4
3,261,383 - A4249_RS16160 0.39 -3.1
3,261,383 - A4249_RS16160 0.39 -1.2
3,261,383 - A4249_RS16160 0.39 -3.1
3,261,383 - A4249_RS16160 0.39 -0.7
3,261,656 + A4249_RS16160 0.62 -4.6
3,261,656 + A4249_RS16160 0.62 -2.0
3,261,656 + A4249_RS16160 0.62 -3.6
3,261,656 + A4249_RS16160 0.62 -1.7
3,261,656 + A4249_RS16160 0.62 -3.1
3,261,656 + A4249_RS16160 0.62 -4.6
3,261,656 + A4249_RS16160 0.62 -2.2
3,261,657 - A4249_RS16160 0.62 -3.6
3,261,657 - A4249_RS16160 0.62 -2.5
3,261,657 - A4249_RS16160 0.62 -5.2
3,261,657 - A4249_RS16160 0.62 -0.2
3,261,657 - A4249_RS16160 0.62 -2.5
3,261,657 - A4249_RS16160 0.62 -4.3
3,261,657 - A4249_RS16160 0.62 -4.0
3,261,657 - A4249_RS16160 0.62 -2.4
3,261,657 - A4249_RS16160 0.62 +0.3
3,261,657 - A4249_RS16160 0.62 -2.5
3,261,657 - A4249_RS16160 0.62 -1.2
3,261,657 - A4249_RS16160 0.62 -1.0
3,261,683 + A4249_RS16160 0.64 -4.7
3,261,683 + A4249_RS16160 0.64 -3.1
3,261,683 + A4249_RS16160 0.64 -3.5
3,261,683 + A4249_RS16160 0.64 -2.5
3,261,684 - A4249_RS16160 0.64 -3.1
3,261,684 - A4249_RS16160 0.64 -0.7
3,261,796 + A4249_RS16160 0.74 -2.3
3,261,797 - A4249_RS16160 0.74 -4.2
3,261,878 + A4249_RS16160 0.81 -3.4
3,261,958 + A4249_RS16160 0.88 -2.5
3,261,958 + A4249_RS16160 0.88 -3.5
3,261,958 + A4249_RS16160 0.88 -2.8
3,261,958 + A4249_RS16160 0.88 -5.1
3,261,958 + A4249_RS16160 0.88 -2.0
3,261,959 - A4249_RS16160 0.88 -4.8
3,261,959 - A4249_RS16160 0.88 -0.8
3,261,959 - A4249_RS16160 0.88 -2.8
3,261,959 - A4249_RS16160 0.88 -2.7
3,261,964 + A4249_RS16160 0.88 -0.7
3,261,964 + A4249_RS16160 0.88 -1.7
3,261,965 - A4249_RS16160 0.88 -4.9
3,261,965 - A4249_RS16160 0.88 -3.7
3,261,965 - A4249_RS16160 0.88 -3.8
3,261,965 - A4249_RS16160 0.88 -2.0
3,261,965 - A4249_RS16160 0.88 -2.2
3,261,965 - A4249_RS16160 0.88 -2.0
3,261,965 - A4249_RS16160 0.88 -4.5
3,261,997 + -4.2
3,261,997 + -2.7
3,261,997 + -3.9
3,261,997 + -3.7
3,261,997 + -3.5
3,261,997 + -1.7
3,261,998 - -3.4
3,261,998 - -2.7
3,261,998 - +0.3
3,261,998 - -2.2
3,261,998 - -0.7
3,261,998 - -3.2
3,261,998 - -2.0
3,262,012 + -4.9
3,262,012 + -2.5
3,262,012 + -4.2
3,262,012 + -3.2
3,262,013 - -4.7
3,262,013 - -3.7
3,262,013 - -2.7
3,262,013 - -4.6
3,262,013 - -3.2
3,262,013 - -4.7
3,262,013 - -4.7
3,262,050 - -1.2
3,262,111 + -4.3
3,262,111 + -4.1
3,262,179 + -4.1
3,262,180 - -0.7
3,262,318 + A4249_RS16165 0.21 -4.7
3,262,319 - A4249_RS16165 0.21 -2.2
3,262,378 - A4249_RS16165 0.26 +0.3
3,262,401 + A4249_RS16165 0.29 -2.5
3,262,402 - A4249_RS16165 0.29 -0.7
3,262,483 - A4249_RS16165 0.36 -4.6
3,262,483 - A4249_RS16165 0.36 -1.7
3,262,863 - A4249_RS16165 0.72 -3.2
3,262,863 - A4249_RS16165 0.72 -2.0
3,262,984 + A4249_RS16165 0.84 -1.7
3,262,985 - A4249_RS16165 0.84 -2.7
3,263,319 - -0.7

Or see this region's nucleotide sequence