Experiment: D-Glucose (C); 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS15495 and A4249_RS15500 are separated by 112 nucleotides A4249_RS15500 and A4249_RS15505 are separated by 236 nucleotides A4249_RS15505 and A4249_RS15510 are separated by 73 nucleotides A4249_RS15510 and A4249_RS15515 are separated by 300 nucleotides
A4249_RS15495: A4249_RS15495 - M1 family metallopeptidase, at 3,137,517 to 3,139,241
_RS15495
A4249_RS15500: A4249_RS15500 - 50S ribosomal protein L28, at 3,139,354 to 3,139,656
_RS15500
A4249_RS15505: A4249_RS15505 - DUF3617 family protein, at 3,139,893 to 3,140,372
_RS15505
A4249_RS15510: A4249_RS15510 - CarD family transcriptional regulator, at 3,140,446 to 3,140,976
_RS15510
A4249_RS15515: A4249_RS15515 - ferredoxin family protein, at 3,141,277 to 3,141,618
_RS15515
Position (kb)
3139
3140
3141 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3139.139 kb on - strand at 3139.273 kb on + strand at 3139.274 kb on - strand at 3139.337 kb on + strand at 3139.337 kb on + strand at 3139.337 kb on + strand at 3139.337 kb on + strand at 3139.338 kb on - strand at 3139.338 kb on - strand at 3139.338 kb on - strand at 3139.338 kb on - strand at 3139.338 kb on - strand at 3139.338 kb on - strand at 3139.338 kb on - strand at 3139.338 kb on - strand at 3139.338 kb on - strand at 3139.338 kb on - strand at 3139.338 kb on - strand at 3139.338 kb on - strand at 3139.338 kb on - strand at 3139.752 kb on - strand at 3139.752 kb on - strand at 3139.838 kb on + strand at 3139.838 kb on + strand at 3139.838 kb on + strand at 3139.839 kb on - strand at 3139.839 kb on - strand at 3139.839 kb on - strand at 3139.839 kb on - strand at 3139.847 kb on + strand at 3139.848 kb on - strand at 3139.848 kb on - strand at 3139.848 kb on - strand at 3139.848 kb on - strand at 3139.848 kb on - strand at 3139.848 kb on - strand at 3140.043 kb on + strand, within A4249_RS15505 at 3140.043 kb on + strand, within A4249_RS15505 at 3140.043 kb on + strand, within A4249_RS15505 at 3140.043 kb on + strand, within A4249_RS15505 at 3140.043 kb on + strand, within A4249_RS15505 at 3140.044 kb on - strand, within A4249_RS15505 at 3140.044 kb on - strand, within A4249_RS15505 at 3140.048 kb on + strand, within A4249_RS15505 at 3140.048 kb on + strand, within A4249_RS15505 at 3140.048 kb on + strand, within A4249_RS15505 at 3140.049 kb on - strand, within A4249_RS15505 at 3140.049 kb on - strand, within A4249_RS15505 at 3140.049 kb on - strand, within A4249_RS15505 at 3140.247 kb on + strand, within A4249_RS15505 at 3140.304 kb on + strand, within A4249_RS15505 at 3140.304 kb on + strand, within A4249_RS15505 at 3140.304 kb on + strand, within A4249_RS15505 at 3140.304 kb on + strand, within A4249_RS15505 at 3140.305 kb on - strand, within A4249_RS15505 at 3140.305 kb on - strand, within A4249_RS15505 at 3140.305 kb on - strand, within A4249_RS15505 at 3140.305 kb on - strand, within A4249_RS15505 at 3140.305 kb on - strand, within A4249_RS15505 at 3140.305 kb on - strand, within A4249_RS15505 at 3140.306 kb on + strand, within A4249_RS15505 at 3140.307 kb on - strand, within A4249_RS15505 at 3140.365 kb on - strand at 3140.365 kb on - strand at 3140.447 kb on + strand at 3140.447 kb on + strand at 3140.448 kb on - strand at 3140.448 kb on - strand at 3141.244 kb on + strand at 3141.244 kb on + strand at 3141.244 kb on + strand at 3141.244 kb on + strand at 3141.244 kb on + strand at 3141.245 kb on - strand at 3141.245 kb on - strand at 3141.245 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 30C remove 3,139,139 - -0.3 3,139,273 + -0.2 3,139,274 - +0.2 3,139,337 + +0.2 3,139,337 + +1.3 3,139,337 + -2.5 3,139,337 + -0.7 3,139,338 - -0.2 3,139,338 - -3.2 3,139,338 - -0.7 3,139,338 - -0.1 3,139,338 - -1.4 3,139,338 - +0.4 3,139,338 - +0.6 3,139,338 - +0.5 3,139,338 - +2.9 3,139,338 - +0.0 3,139,338 - +0.5 3,139,338 - +0.8 3,139,338 - +1.3 3,139,752 - +0.2 3,139,752 - -1.6 3,139,838 + -0.1 3,139,838 + -1.2 3,139,838 + +2.3 3,139,839 - -0.2 3,139,839 - +0.7 3,139,839 - -2.2 3,139,839 - -0.7 3,139,847 + -1.2 3,139,848 - +1.8 3,139,848 - +0.5 3,139,848 - +0.1 3,139,848 - +0.2 3,139,848 - +0.6 3,139,848 - +0.9 3,140,043 + A4249_RS15505 0.31 -1.8 3,140,043 + A4249_RS15505 0.31 -2.7 3,140,043 + A4249_RS15505 0.31 -1.7 3,140,043 + A4249_RS15505 0.31 -2.9 3,140,043 + A4249_RS15505 0.31 -3.2 3,140,044 - A4249_RS15505 0.31 -1.2 3,140,044 - A4249_RS15505 0.31 +1.9 3,140,048 + A4249_RS15505 0.32 -1.2 3,140,048 + A4249_RS15505 0.32 +0.3 3,140,048 + A4249_RS15505 0.32 -2.4 3,140,049 - A4249_RS15505 0.33 -2.8 3,140,049 - A4249_RS15505 0.33 -1.4 3,140,049 - A4249_RS15505 0.33 -1.4 3,140,247 + A4249_RS15505 0.74 -1.2 3,140,304 + A4249_RS15505 0.86 -1.9 3,140,304 + A4249_RS15505 0.86 -3.8 3,140,304 + A4249_RS15505 0.86 -0.7 3,140,304 + A4249_RS15505 0.86 -3.7 3,140,305 - A4249_RS15505 0.86 -1.2 3,140,305 - A4249_RS15505 0.86 -1.8 3,140,305 - A4249_RS15505 0.86 -1.7 3,140,305 - A4249_RS15505 0.86 -2.7 3,140,305 - A4249_RS15505 0.86 -0.8 3,140,305 - A4249_RS15505 0.86 +0.3 3,140,306 + A4249_RS15505 0.86 -1.7 3,140,307 - A4249_RS15505 0.86 -0.7 3,140,365 - -0.5 3,140,365 - +0.2 3,140,447 + -1.7 3,140,447 + -0.0 3,140,448 - -0.7 3,140,448 - -1.3 3,141,244 + -0.2 3,141,244 + -1.5 3,141,244 + -1.7 3,141,244 + +0.9 3,141,244 + -2.2 3,141,245 - -0.0 3,141,245 - -0.4 3,141,245 - -0.2
Or see this region's nucleotide sequence