Experiment: D-Glucose (C); 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS15445 and A4249_RS15450 are separated by 26 nucleotides A4249_RS15450 and A4249_RS15455 overlap by 8 nucleotides A4249_RS15455 and A4249_RS15460 are separated by 6 nucleotides
A4249_RS15445: A4249_RS15445 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD, at 3,128,162 to 3,129,349
_RS15445
A4249_RS15450: A4249_RS15450 - NAD(P)-dependent glycerol-3-phosphate dehydrogenase, at 3,129,376 to 3,130,374
_RS15450
A4249_RS15455: A4249_RS15455 - Rieske (2Fe-2S) protein, at 3,130,367 to 3,130,750
_RS15455
A4249_RS15460: A4249_RS15460 - polyphosphate kinase 2, at 3,130,757 to 3,131,506
_RS15460
Position (kb)
3129
3130
3131 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3129.355 kb on - strand at 3130.599 kb on - strand, within A4249_RS15455 at 3130.599 kb on - strand, within A4249_RS15455 at 3130.857 kb on + strand, within A4249_RS15460 at 3130.857 kb on + strand, within A4249_RS15460 at 3130.857 kb on + strand, within A4249_RS15460 at 3130.858 kb on - strand, within A4249_RS15460 at 3130.920 kb on + strand, within A4249_RS15460 at 3130.921 kb on - strand, within A4249_RS15460 at 3130.921 kb on - strand, within A4249_RS15460 at 3130.965 kb on + strand, within A4249_RS15460 at 3130.965 kb on + strand, within A4249_RS15460 at 3130.966 kb on - strand, within A4249_RS15460 at 3130.966 kb on - strand, within A4249_RS15460 at 3130.966 kb on - strand, within A4249_RS15460 at 3131.176 kb on - strand, within A4249_RS15460 at 3131.208 kb on + strand, within A4249_RS15460 at 3131.263 kb on - strand, within A4249_RS15460 at 3131.263 kb on - strand, within A4249_RS15460 at 3131.263 kb on - strand, within A4249_RS15460 at 3131.263 kb on - strand, within A4249_RS15460 at 3131.263 kb on - strand, within A4249_RS15460 at 3131.274 kb on + strand, within A4249_RS15460 at 3131.275 kb on - strand, within A4249_RS15460 at 3131.275 kb on - strand, within A4249_RS15460 at 3131.275 kb on - strand, within A4249_RS15460 at 3131.276 kb on - strand, within A4249_RS15460 at 3131.341 kb on + strand, within A4249_RS15460 at 3131.341 kb on + strand, within A4249_RS15460 at 3131.341 kb on + strand, within A4249_RS15460 at 3131.341 kb on + strand, within A4249_RS15460 at 3131.341 kb on + strand, within A4249_RS15460 at 3131.341 kb on + strand, within A4249_RS15460 at 3131.341 kb on + strand, within A4249_RS15460 at 3131.341 kb on + strand, within A4249_RS15460 at 3131.341 kb on + strand, within A4249_RS15460 at 3131.341 kb on + strand, within A4249_RS15460 at 3131.341 kb on + strand, within A4249_RS15460 at 3131.341 kb on + strand, within A4249_RS15460 at 3131.341 kb on + strand, within A4249_RS15460 at 3131.341 kb on + strand, within A4249_RS15460 at 3131.341 kb on + strand, within A4249_RS15460 at 3131.341 kb on + strand, within A4249_RS15460 at 3131.341 kb on + strand, within A4249_RS15460 at 3131.341 kb on + strand, within A4249_RS15460 at 3131.342 kb on - strand, within A4249_RS15460 at 3131.342 kb on - strand, within A4249_RS15460 at 3131.342 kb on - strand, within A4249_RS15460 at 3131.342 kb on - strand, within A4249_RS15460 at 3131.342 kb on - strand, within A4249_RS15460 at 3131.342 kb on - strand, within A4249_RS15460 at 3131.342 kb on - strand, within A4249_RS15460 at 3131.342 kb on - strand, within A4249_RS15460 at 3131.342 kb on - strand, within A4249_RS15460 at 3131.342 kb on - strand, within A4249_RS15460 at 3131.342 kb on - strand, within A4249_RS15460 at 3131.342 kb on - strand, within A4249_RS15460 at 3131.342 kb on - strand, within A4249_RS15460 at 3131.342 kb on - strand, within A4249_RS15460 at 3131.342 kb on - strand, within A4249_RS15460 at 3131.342 kb on - strand, within A4249_RS15460
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 30C remove 3,129,355 - -0.2 3,130,599 - A4249_RS15455 0.60 -0.3 3,130,599 - A4249_RS15455 0.60 -0.4 3,130,857 + A4249_RS15460 0.13 -1.2 3,130,857 + A4249_RS15460 0.13 +0.5 3,130,857 + A4249_RS15460 0.13 +0.1 3,130,858 - A4249_RS15460 0.13 -1.4 3,130,920 + A4249_RS15460 0.22 +0.8 3,130,921 - A4249_RS15460 0.22 -0.7 3,130,921 - A4249_RS15460 0.22 -0.8 3,130,965 + A4249_RS15460 0.28 -1.2 3,130,965 + A4249_RS15460 0.28 +1.3 3,130,966 - A4249_RS15460 0.28 -0.2 3,130,966 - A4249_RS15460 0.28 +0.4 3,130,966 - A4249_RS15460 0.28 +0.3 3,131,176 - A4249_RS15460 0.56 +0.9 3,131,208 + A4249_RS15460 0.60 -0.4 3,131,263 - A4249_RS15460 0.67 -0.1 3,131,263 - A4249_RS15460 0.67 +0.7 3,131,263 - A4249_RS15460 0.67 +0.1 3,131,263 - A4249_RS15460 0.67 +0.9 3,131,263 - A4249_RS15460 0.67 +0.1 3,131,274 + A4249_RS15460 0.69 -0.1 3,131,275 - A4249_RS15460 0.69 -0.2 3,131,275 - A4249_RS15460 0.69 +2.7 3,131,275 - A4249_RS15460 0.69 -1.7 3,131,276 - A4249_RS15460 0.69 +0.0 3,131,341 + A4249_RS15460 0.78 -0.1 3,131,341 + A4249_RS15460 0.78 -0.5 3,131,341 + A4249_RS15460 0.78 +0.8 3,131,341 + A4249_RS15460 0.78 -0.9 3,131,341 + A4249_RS15460 0.78 +0.0 3,131,341 + A4249_RS15460 0.78 -0.0 3,131,341 + A4249_RS15460 0.78 +0.8 3,131,341 + A4249_RS15460 0.78 -0.0 3,131,341 + A4249_RS15460 0.78 +2.7 3,131,341 + A4249_RS15460 0.78 +0.8 3,131,341 + A4249_RS15460 0.78 +0.6 3,131,341 + A4249_RS15460 0.78 +0.2 3,131,341 + A4249_RS15460 0.78 +0.6 3,131,341 + A4249_RS15460 0.78 -0.7 3,131,341 + A4249_RS15460 0.78 -1.1 3,131,341 + A4249_RS15460 0.78 +1.2 3,131,341 + A4249_RS15460 0.78 -0.1 3,131,341 + A4249_RS15460 0.78 +0.9 3,131,342 - A4249_RS15460 0.78 -0.2 3,131,342 - A4249_RS15460 0.78 +0.0 3,131,342 - A4249_RS15460 0.78 -1.7 3,131,342 - A4249_RS15460 0.78 +1.1 3,131,342 - A4249_RS15460 0.78 -1.1 3,131,342 - A4249_RS15460 0.78 +0.3 3,131,342 - A4249_RS15460 0.78 -1.0 3,131,342 - A4249_RS15460 0.78 +0.1 3,131,342 - A4249_RS15460 0.78 -0.1 3,131,342 - A4249_RS15460 0.78 -0.9 3,131,342 - A4249_RS15460 0.78 -2.7 3,131,342 - A4249_RS15460 0.78 +0.6 3,131,342 - A4249_RS15460 0.78 -1.0 3,131,342 - A4249_RS15460 0.78 +0.8 3,131,342 - A4249_RS15460 0.78 +0.9 3,131,342 - A4249_RS15460 0.78 +0.5
Or see this region's nucleotide sequence