Experiment: D-Glucose (C); 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS14805 and A4249_RS14810 are separated by 17 nucleotides A4249_RS14810 and A4249_RS14815 are separated by 79 nucleotides A4249_RS14815 and A4249_RS14820 are separated by 144 nucleotides A4249_RS14820 and A4249_RS14825 are separated by 139 nucleotides
A4249_RS14805: A4249_RS14805 - Fur family transcriptional regulator, at 2,997,517 to 2,998,005
_RS14805
A4249_RS14810: A4249_RS14810 - alpha/beta hydrolase, at 2,998,023 to 2,998,898
_RS14810
A4249_RS14815: A4249_RS14815 - nicotinate-nucleotide adenylyltransferase, at 2,998,978 to 2,999,643
_RS14815
A4249_RS14820: A4249_RS14820 - ribosome silencing factor, at 2,999,788 to 3,000,222
_RS14820
A4249_RS14825: A4249_RS14825 - 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH, at 3,000,362 to 3,000,826
_RS14825
Position (kb)
2998
2999
3000 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2998.161 kb on + strand, within A4249_RS14810 at 2998.161 kb on + strand, within A4249_RS14810 at 2998.161 kb on + strand, within A4249_RS14810 at 2998.162 kb on - strand, within A4249_RS14810 at 2998.162 kb on - strand, within A4249_RS14810 at 2998.162 kb on - strand, within A4249_RS14810 at 2998.162 kb on - strand, within A4249_RS14810 at 2998.162 kb on - strand, within A4249_RS14810 at 2998.346 kb on + strand, within A4249_RS14810 at 2998.346 kb on + strand, within A4249_RS14810 at 2998.346 kb on + strand, within A4249_RS14810 at 2998.346 kb on + strand, within A4249_RS14810 at 2998.346 kb on + strand, within A4249_RS14810 at 2998.347 kb on - strand, within A4249_RS14810 at 2998.347 kb on - strand, within A4249_RS14810 at 2998.347 kb on - strand, within A4249_RS14810 at 2998.347 kb on - strand, within A4249_RS14810 at 2998.347 kb on - strand, within A4249_RS14810 at 2998.347 kb on - strand, within A4249_RS14810 at 2998.557 kb on + strand, within A4249_RS14810 at 2998.608 kb on + strand, within A4249_RS14810 at 2998.608 kb on + strand, within A4249_RS14810 at 2998.608 kb on + strand, within A4249_RS14810 at 2998.608 kb on + strand, within A4249_RS14810 at 2998.608 kb on + strand, within A4249_RS14810 at 2998.608 kb on + strand, within A4249_RS14810 at 2998.608 kb on + strand, within A4249_RS14810 at 2998.683 kb on + strand, within A4249_RS14810 at 2998.683 kb on + strand, within A4249_RS14810 at 2998.684 kb on - strand, within A4249_RS14810 at 2998.684 kb on - strand, within A4249_RS14810 at 2998.864 kb on + strand at 2998.911 kb on + strand at 2998.934 kb on - strand at 2998.934 kb on - strand at 2998.935 kb on + strand at 2999.610 kb on + strand at 2999.690 kb on + strand at 2999.704 kb on - strand at 2999.746 kb on + strand at 2999.747 kb on - strand at 2999.751 kb on + strand at 2999.751 kb on + strand at 2999.751 kb on + strand at 2999.751 kb on + strand at 2999.751 kb on + strand at 2999.751 kb on + strand at 2999.752 kb on - strand at 3000.166 kb on + strand, within A4249_RS14820 at 3000.166 kb on + strand, within A4249_RS14820 at 3000.166 kb on + strand, within A4249_RS14820 at 3000.166 kb on + strand, within A4249_RS14820 at 3000.166 kb on + strand, within A4249_RS14820 at 3000.166 kb on + strand, within A4249_RS14820 at 3000.167 kb on - strand, within A4249_RS14820 at 3000.167 kb on - strand, within A4249_RS14820 at 3000.167 kb on - strand, within A4249_RS14820 at 3000.167 kb on - strand, within A4249_RS14820 at 3000.167 kb on - strand, within A4249_RS14820 at 3000.167 kb on - strand, within A4249_RS14820 at 3000.167 kb on - strand, within A4249_RS14820 at 3000.167 kb on - strand, within A4249_RS14820 at 3000.264 kb on + strand at 3000.264 kb on + strand at 3000.265 kb on - strand at 3000.265 kb on - strand at 3000.265 kb on - strand at 3000.265 kb on - strand at 3000.265 kb on - strand at 3000.265 kb on - strand at 3000.265 kb on - strand at 3000.265 kb on - strand at 3000.265 kb on - strand at 3000.265 kb on - strand at 3000.287 kb on + strand at 3000.287 kb on + strand at 3000.287 kb on + strand at 3000.288 kb on - strand at 3000.355 kb on + strand at 3000.355 kb on + strand at 3000.355 kb on + strand at 3000.355 kb on + strand at 3000.355 kb on + strand at 3000.355 kb on + strand at 3000.355 kb on + strand at 3000.356 kb on - strand at 3000.428 kb on + strand, within A4249_RS14825 at 3000.429 kb on - strand, within A4249_RS14825 at 3000.429 kb on - strand, within A4249_RS14825 at 3000.590 kb on + strand, within A4249_RS14825 at 3000.590 kb on + strand, within A4249_RS14825 at 3000.590 kb on + strand, within A4249_RS14825 at 3000.591 kb on - strand, within A4249_RS14825 at 3000.591 kb on - strand, within A4249_RS14825
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 30C remove 2,998,161 + A4249_RS14810 0.16 -1.8 2,998,161 + A4249_RS14810 0.16 +0.1 2,998,161 + A4249_RS14810 0.16 +0.3 2,998,162 - A4249_RS14810 0.16 +1.9 2,998,162 - A4249_RS14810 0.16 -0.2 2,998,162 - A4249_RS14810 0.16 -0.6 2,998,162 - A4249_RS14810 0.16 -0.4 2,998,162 - A4249_RS14810 0.16 +0.8 2,998,346 + A4249_RS14810 0.37 -1.0 2,998,346 + A4249_RS14810 0.37 +0.0 2,998,346 + A4249_RS14810 0.37 +0.8 2,998,346 + A4249_RS14810 0.37 +0.7 2,998,346 + A4249_RS14810 0.37 -1.6 2,998,347 - A4249_RS14810 0.37 -0.4 2,998,347 - A4249_RS14810 0.37 -1.8 2,998,347 - A4249_RS14810 0.37 +0.3 2,998,347 - A4249_RS14810 0.37 +0.1 2,998,347 - A4249_RS14810 0.37 +1.6 2,998,347 - A4249_RS14810 0.37 +1.9 2,998,557 + A4249_RS14810 0.61 -1.7 2,998,608 + A4249_RS14810 0.67 +0.6 2,998,608 + A4249_RS14810 0.67 -3.1 2,998,608 + A4249_RS14810 0.67 +0.1 2,998,608 + A4249_RS14810 0.67 -0.2 2,998,608 + A4249_RS14810 0.67 +0.6 2,998,608 + A4249_RS14810 0.67 -0.0 2,998,608 + A4249_RS14810 0.67 +2.6 2,998,683 + A4249_RS14810 0.75 -1.2 2,998,683 + A4249_RS14810 0.75 -1.5 2,998,684 - A4249_RS14810 0.75 +0.6 2,998,684 - A4249_RS14810 0.75 +0.2 2,998,864 + -1.0 2,998,911 + +0.1 2,998,934 - +0.9 2,998,934 - +0.4 2,998,935 + +0.5 2,999,610 + +0.5 2,999,690 + +0.2 2,999,704 - -0.8 2,999,746 + -0.5 2,999,747 - -2.0 2,999,751 + -2.5 2,999,751 + -0.3 2,999,751 + -1.5 2,999,751 + -2.2 2,999,751 + -0.3 2,999,751 + +0.3 2,999,752 - -1.7 3,000,166 + A4249_RS14820 0.87 +0.9 3,000,166 + A4249_RS14820 0.87 -2.0 3,000,166 + A4249_RS14820 0.87 -0.9 3,000,166 + A4249_RS14820 0.87 -1.5 3,000,166 + A4249_RS14820 0.87 -2.4 3,000,166 + A4249_RS14820 0.87 -0.7 3,000,167 - A4249_RS14820 0.87 -1.4 3,000,167 - A4249_RS14820 0.87 -3.5 3,000,167 - A4249_RS14820 0.87 +0.3 3,000,167 - A4249_RS14820 0.87 -4.6 3,000,167 - A4249_RS14820 0.87 -0.9 3,000,167 - A4249_RS14820 0.87 -2.2 3,000,167 - A4249_RS14820 0.87 +0.3 3,000,167 - A4249_RS14820 0.87 -1.4 3,000,264 + +0.5 3,000,264 + -0.2 3,000,265 - +0.3 3,000,265 - +3.5 3,000,265 - +1.9 3,000,265 - -1.5 3,000,265 - +0.3 3,000,265 - -3.4 3,000,265 - -0.6 3,000,265 - +1.3 3,000,265 - +0.7 3,000,265 - -2.7 3,000,287 + -0.0 3,000,287 + -1.0 3,000,287 + -1.0 3,000,288 - -0.7 3,000,355 + +0.1 3,000,355 + +0.6 3,000,355 + +0.5 3,000,355 + -0.7 3,000,355 + +0.0 3,000,355 + -0.6 3,000,355 + +0.0 3,000,356 - -0.4 3,000,428 + A4249_RS14825 0.14 +0.7 3,000,429 - A4249_RS14825 0.14 -0.7 3,000,429 - A4249_RS14825 0.14 -0.3 3,000,590 + A4249_RS14825 0.49 -0.2 3,000,590 + A4249_RS14825 0.49 +0.5 3,000,590 + A4249_RS14825 0.49 -0.5 3,000,591 - A4249_RS14825 0.49 +0.3 3,000,591 - A4249_RS14825 0.49 +0.7
Or see this region's nucleotide sequence