Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14795

Experiment: D-Glucose (C); 30C

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntA4249_RS14790 and A4249_RS14795 are separated by 15 nucleotidesA4249_RS14795 and A4249_RS14800 are separated by 61 nucleotidesA4249_RS14800 and A4249_RS14805 are separated by 117 nucleotides A4249_RS14790: A4249_RS14790 - NADP-dependent oxidoreductase, at 2,995,101 to 2,996,132 _RS14790 A4249_RS14795: A4249_RS14795 - acyl dehydratase, at 2,996,148 to 2,996,555 _RS14795 A4249_RS14800: A4249_RS14800 - SapC family protein, at 2,996,617 to 2,997,399 _RS14800 A4249_RS14805: A4249_RS14805 - Fur family transcriptional regulator, at 2,997,517 to 2,998,005 _RS14805 Position (kb) 2996 2997Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2995.242 kb on + strand, within A4249_RS14790at 2995.242 kb on + strand, within A4249_RS14790at 2995.242 kb on + strand, within A4249_RS14790at 2995.243 kb on - strand, within A4249_RS14790at 2995.243 kb on - strand, within A4249_RS14790at 2995.243 kb on - strand, within A4249_RS14790at 2995.243 kb on - strand, within A4249_RS14790at 2995.284 kb on - strand, within A4249_RS14790at 2995.293 kb on + strand, within A4249_RS14790at 2995.293 kb on + strand, within A4249_RS14790at 2995.293 kb on + strand, within A4249_RS14790at 2995.294 kb on - strand, within A4249_RS14790at 2995.294 kb on - strand, within A4249_RS14790at 2995.294 kb on - strand, within A4249_RS14790at 2995.419 kb on + strand, within A4249_RS14790at 2995.419 kb on + strand, within A4249_RS14790at 2995.420 kb on - strand, within A4249_RS14790at 2995.420 kb on - strand, within A4249_RS14790at 2995.420 kb on - strand, within A4249_RS14790at 2995.420 kb on - strand, within A4249_RS14790at 2995.487 kb on + strand, within A4249_RS14790at 2995.487 kb on + strand, within A4249_RS14790at 2995.487 kb on + strand, within A4249_RS14790at 2995.487 kb on + strand, within A4249_RS14790at 2995.487 kb on + strand, within A4249_RS14790at 2995.487 kb on + strand, within A4249_RS14790at 2995.488 kb on - strand, within A4249_RS14790at 2995.488 kb on - strand, within A4249_RS14790at 2995.488 kb on - strand, within A4249_RS14790at 2995.488 kb on - strand, within A4249_RS14790at 2995.488 kb on - strand, within A4249_RS14790at 2995.488 kb on - strand, within A4249_RS14790at 2995.488 kb on - strand, within A4249_RS14790at 2995.488 kb on - strand, within A4249_RS14790at 2995.522 kb on - strand, within A4249_RS14790at 2995.553 kb on - strand, within A4249_RS14790at 2995.713 kb on + strand, within A4249_RS14790at 2995.713 kb on + strand, within A4249_RS14790at 2995.714 kb on - strand, within A4249_RS14790at 2995.714 kb on - strand, within A4249_RS14790at 2995.714 kb on - strand, within A4249_RS14790at 2995.714 kb on - strand, within A4249_RS14790at 2995.866 kb on + strand, within A4249_RS14790at 2995.866 kb on + strand, within A4249_RS14790at 2995.866 kb on + strand, within A4249_RS14790at 2995.866 kb on + strand, within A4249_RS14790at 2995.866 kb on + strand, within A4249_RS14790at 2995.867 kb on - strand, within A4249_RS14790at 2995.867 kb on - strand, within A4249_RS14790at 2995.867 kb on - strand, within A4249_RS14790at 2995.867 kb on - strand, within A4249_RS14790at 2995.953 kb on + strand, within A4249_RS14790at 2995.953 kb on + strand, within A4249_RS14790at 2995.953 kb on + strand, within A4249_RS14790at 2995.953 kb on + strand, within A4249_RS14790at 2995.954 kb on - strand, within A4249_RS14790at 2996.281 kb on - strand, within A4249_RS14795at 2996.304 kb on + strand, within A4249_RS14795at 2996.304 kb on + strand, within A4249_RS14795at 2996.304 kb on + strand, within A4249_RS14795at 2996.304 kb on + strand, within A4249_RS14795at 2996.304 kb on + strand, within A4249_RS14795at 2996.304 kb on + strand, within A4249_RS14795at 2996.304 kb on + strand, within A4249_RS14795at 2996.304 kb on + strand, within A4249_RS14795at 2996.304 kb on + strand, within A4249_RS14795at 2996.304 kb on + strand, within A4249_RS14795at 2996.304 kb on + strand, within A4249_RS14795at 2996.304 kb on + strand, within A4249_RS14795at 2996.304 kb on + strand, within A4249_RS14795at 2996.304 kb on + strand, within A4249_RS14795at 2996.305 kb on - strand, within A4249_RS14795at 2996.305 kb on - strand, within A4249_RS14795at 2996.305 kb on - strand, within A4249_RS14795at 2996.305 kb on - strand, within A4249_RS14795at 2996.305 kb on - strand, within A4249_RS14795at 2996.305 kb on - strand, within A4249_RS14795at 2996.305 kb on - strand, within A4249_RS14795at 2996.305 kb on - strand, within A4249_RS14795at 2996.305 kb on - strand, within A4249_RS14795at 2996.357 kb on + strand, within A4249_RS14795at 2996.357 kb on + strand, within A4249_RS14795at 2996.358 kb on - strand, within A4249_RS14795at 2996.358 kb on - strand, within A4249_RS14795at 2996.358 kb on - strand, within A4249_RS14795at 2996.385 kb on + strand, within A4249_RS14795at 2996.385 kb on + strand, within A4249_RS14795at 2996.385 kb on + strand, within A4249_RS14795at 2996.386 kb on - strand, within A4249_RS14795at 2996.618 kb on + strandat 2996.618 kb on + strandat 2996.618 kb on + strandat 2996.618 kb on + strandat 2996.618 kb on + strandat 2996.618 kb on + strandat 2996.618 kb on + strandat 2996.619 kb on - strandat 2996.619 kb on - strandat 2996.619 kb on - strandat 2996.619 kb on - strandat 2996.706 kb on - strand, within A4249_RS14800at 2996.706 kb on - strand, within A4249_RS14800at 2996.789 kb on + strand, within A4249_RS14800at 2996.789 kb on + strand, within A4249_RS14800at 2996.789 kb on + strand, within A4249_RS14800at 2996.789 kb on + strand, within A4249_RS14800at 2996.789 kb on + strand, within A4249_RS14800at 2996.789 kb on + strand, within A4249_RS14800at 2996.789 kb on + strand, within A4249_RS14800at 2996.789 kb on + strand, within A4249_RS14800at 2996.789 kb on + strand, within A4249_RS14800at 2996.790 kb on - strand, within A4249_RS14800at 2996.790 kb on - strand, within A4249_RS14800at 2996.790 kb on - strand, within A4249_RS14800at 2996.790 kb on - strand, within A4249_RS14800at 2996.790 kb on - strand, within A4249_RS14800at 2996.790 kb on - strand, within A4249_RS14800at 2996.792 kb on + strand, within A4249_RS14800at 2996.793 kb on - strand, within A4249_RS14800at 2996.793 kb on - strand, within A4249_RS14800at 2996.960 kb on + strand, within A4249_RS14800at 2996.960 kb on + strand, within A4249_RS14800at 2997.095 kb on + strand, within A4249_RS14800at 2997.095 kb on + strand, within A4249_RS14800at 2997.095 kb on + strand, within A4249_RS14800at 2997.095 kb on + strand, within A4249_RS14800at 2997.095 kb on + strand, within A4249_RS14800at 2997.096 kb on - strand, within A4249_RS14800at 2997.096 kb on - strand, within A4249_RS14800at 2997.096 kb on - strand, within A4249_RS14800at 2997.107 kb on + strand, within A4249_RS14800at 2997.107 kb on + strand, within A4249_RS14800at 2997.107 kb on + strand, within A4249_RS14800at 2997.107 kb on + strand, within A4249_RS14800at 2997.108 kb on - strand, within A4249_RS14800at 2997.108 kb on - strand, within A4249_RS14800at 2997.108 kb on - strand, within A4249_RS14800at 2997.108 kb on - strand, within A4249_RS14800at 2997.108 kb on - strand, within A4249_RS14800at 2997.108 kb on - strand, within A4249_RS14800at 2997.108 kb on - strand, within A4249_RS14800at 2997.215 kb on + strand, within A4249_RS14800at 2997.261 kb on + strand, within A4249_RS14800at 2997.284 kb on + strand, within A4249_RS14800at 2997.284 kb on + strand, within A4249_RS14800at 2997.284 kb on + strand, within A4249_RS14800at 2997.285 kb on - strand, within A4249_RS14800at 2997.285 kb on - strand, within A4249_RS14800at 2997.285 kb on - strand, within A4249_RS14800at 2997.285 kb on - strand, within A4249_RS14800at 2997.354 kb on - strandat 2997.354 kb on - strandat 2997.354 kb on - strandat 2997.354 kb on - strandat 2997.441 kb on + strandat 2997.441 kb on + strandat 2997.441 kb on + strandat 2997.441 kb on + strandat 2997.442 kb on - strandat 2997.442 kb on - strandat 2997.442 kb on - strandat 2997.505 kb on + strandat 2997.505 kb on + strandat 2997.505 kb on + strandat 2997.505 kb on + strandat 2997.505 kb on + strandat 2997.505 kb on + strandat 2997.505 kb on + strandat 2997.505 kb on + strandat 2997.505 kb on + strandat 2997.506 kb on - strandat 2997.506 kb on - strandat 2997.506 kb on - strandat 2997.506 kb on - strandat 2997.516 kb on + strandat 2997.516 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C); 30C
remove
2,995,242 + A4249_RS14790 0.14 -1.1
2,995,242 + A4249_RS14790 0.14 -0.9
2,995,242 + A4249_RS14790 0.14 -0.1
2,995,243 - A4249_RS14790 0.14 -1.5
2,995,243 - A4249_RS14790 0.14 +0.2
2,995,243 - A4249_RS14790 0.14 -1.2
2,995,243 - A4249_RS14790 0.14 -0.7
2,995,284 - A4249_RS14790 0.18 +0.2
2,995,293 + A4249_RS14790 0.19 +0.6
2,995,293 + A4249_RS14790 0.19 -0.3
2,995,293 + A4249_RS14790 0.19 -1.8
2,995,294 - A4249_RS14790 0.19 -1.0
2,995,294 - A4249_RS14790 0.19 +0.1
2,995,294 - A4249_RS14790 0.19 +0.1
2,995,419 + A4249_RS14790 0.31 +0.8
2,995,419 + A4249_RS14790 0.31 +0.3
2,995,420 - A4249_RS14790 0.31 +0.8
2,995,420 - A4249_RS14790 0.31 -0.6
2,995,420 - A4249_RS14790 0.31 -0.4
2,995,420 - A4249_RS14790 0.31 -0.1
2,995,487 + A4249_RS14790 0.37 +0.2
2,995,487 + A4249_RS14790 0.37 -1.4
2,995,487 + A4249_RS14790 0.37 -1.8
2,995,487 + A4249_RS14790 0.37 -2.0
2,995,487 + A4249_RS14790 0.37 +0.2
2,995,487 + A4249_RS14790 0.37 -0.3
2,995,488 - A4249_RS14790 0.38 -0.7
2,995,488 - A4249_RS14790 0.38 -1.1
2,995,488 - A4249_RS14790 0.38 -2.7
2,995,488 - A4249_RS14790 0.38 +0.3
2,995,488 - A4249_RS14790 0.38 +1.0
2,995,488 - A4249_RS14790 0.38 -0.7
2,995,488 - A4249_RS14790 0.38 -0.5
2,995,488 - A4249_RS14790 0.38 +0.3
2,995,522 - A4249_RS14790 0.41 +0.2
2,995,553 - A4249_RS14790 0.44 -0.4
2,995,713 + A4249_RS14790 0.59 -2.0
2,995,713 + A4249_RS14790 0.59 -0.5
2,995,714 - A4249_RS14790 0.59 +0.3
2,995,714 - A4249_RS14790 0.59 -0.7
2,995,714 - A4249_RS14790 0.59 -0.7
2,995,714 - A4249_RS14790 0.59 +0.2
2,995,866 + A4249_RS14790 0.74 +0.9
2,995,866 + A4249_RS14790 0.74 -0.3
2,995,866 + A4249_RS14790 0.74 -0.2
2,995,866 + A4249_RS14790 0.74 +1.7
2,995,866 + A4249_RS14790 0.74 -0.1
2,995,867 - A4249_RS14790 0.74 -1.2
2,995,867 - A4249_RS14790 0.74 +1.9
2,995,867 - A4249_RS14790 0.74 -0.2
2,995,867 - A4249_RS14790 0.74 -0.3
2,995,953 + A4249_RS14790 0.83 -0.6
2,995,953 + A4249_RS14790 0.83 +0.3
2,995,953 + A4249_RS14790 0.83 +0.0
2,995,953 + A4249_RS14790 0.83 +1.3
2,995,954 - A4249_RS14790 0.83 +3.2
2,996,281 - A4249_RS14795 0.33 -1.7
2,996,304 + A4249_RS14795 0.38 -1.2
2,996,304 + A4249_RS14795 0.38 -1.0
2,996,304 + A4249_RS14795 0.38 +0.3
2,996,304 + A4249_RS14795 0.38 -2.1
2,996,304 + A4249_RS14795 0.38 -1.7
2,996,304 + A4249_RS14795 0.38 -0.8
2,996,304 + A4249_RS14795 0.38 +1.3
2,996,304 + A4249_RS14795 0.38 +0.7
2,996,304 + A4249_RS14795 0.38 +0.3
2,996,304 + A4249_RS14795 0.38 -0.9
2,996,304 + A4249_RS14795 0.38 -1.8
2,996,304 + A4249_RS14795 0.38 -0.1
2,996,304 + A4249_RS14795 0.38 -0.5
2,996,304 + A4249_RS14795 0.38 -3.0
2,996,305 - A4249_RS14795 0.38 -2.5
2,996,305 - A4249_RS14795 0.38 -1.1
2,996,305 - A4249_RS14795 0.38 +0.3
2,996,305 - A4249_RS14795 0.38 +0.3
2,996,305 - A4249_RS14795 0.38 +0.3
2,996,305 - A4249_RS14795 0.38 -2.4
2,996,305 - A4249_RS14795 0.38 -2.0
2,996,305 - A4249_RS14795 0.38 -2.8
2,996,305 - A4249_RS14795 0.38 -1.7
2,996,357 + A4249_RS14795 0.51 -1.4
2,996,357 + A4249_RS14795 0.51 +0.3
2,996,358 - A4249_RS14795 0.51 -3.2
2,996,358 - A4249_RS14795 0.51 -0.9
2,996,358 - A4249_RS14795 0.51 -0.9
2,996,385 + A4249_RS14795 0.58 -0.7
2,996,385 + A4249_RS14795 0.58 -3.2
2,996,385 + A4249_RS14795 0.58 -2.0
2,996,386 - A4249_RS14795 0.58 -1.2
2,996,618 + -1.6
2,996,618 + +1.3
2,996,618 + +0.8
2,996,618 + +0.1
2,996,618 + +0.1
2,996,618 + -0.1
2,996,618 + +1.8
2,996,619 - +0.3
2,996,619 - +1.1
2,996,619 - +0.1
2,996,619 - +0.6
2,996,706 - A4249_RS14800 0.11 -0.0
2,996,706 - A4249_RS14800 0.11 -0.7
2,996,789 + A4249_RS14800 0.22 +0.1
2,996,789 + A4249_RS14800 0.22 +0.2
2,996,789 + A4249_RS14800 0.22 +0.3
2,996,789 + A4249_RS14800 0.22 +0.2
2,996,789 + A4249_RS14800 0.22 -0.7
2,996,789 + A4249_RS14800 0.22 -0.1
2,996,789 + A4249_RS14800 0.22 -2.2
2,996,789 + A4249_RS14800 0.22 +0.6
2,996,789 + A4249_RS14800 0.22 +1.4
2,996,790 - A4249_RS14800 0.22 +1.9
2,996,790 - A4249_RS14800 0.22 -0.7
2,996,790 - A4249_RS14800 0.22 -0.2
2,996,790 - A4249_RS14800 0.22 +0.1
2,996,790 - A4249_RS14800 0.22 -1.1
2,996,790 - A4249_RS14800 0.22 -0.2
2,996,792 + A4249_RS14800 0.22 +0.5
2,996,793 - A4249_RS14800 0.22 -1.7
2,996,793 - A4249_RS14800 0.22 +1.3
2,996,960 + A4249_RS14800 0.44 -0.9
2,996,960 + A4249_RS14800 0.44 +2.2
2,997,095 + A4249_RS14800 0.61 +0.7
2,997,095 + A4249_RS14800 0.61 +0.7
2,997,095 + A4249_RS14800 0.61 -1.2
2,997,095 + A4249_RS14800 0.61 +0.8
2,997,095 + A4249_RS14800 0.61 -1.9
2,997,096 - A4249_RS14800 0.61 -0.5
2,997,096 - A4249_RS14800 0.61 -0.2
2,997,096 - A4249_RS14800 0.61 -0.8
2,997,107 + A4249_RS14800 0.63 +0.3
2,997,107 + A4249_RS14800 0.63 -1.7
2,997,107 + A4249_RS14800 0.63 -0.1
2,997,107 + A4249_RS14800 0.63 +0.5
2,997,108 - A4249_RS14800 0.63 -0.4
2,997,108 - A4249_RS14800 0.63 -0.7
2,997,108 - A4249_RS14800 0.63 -2.0
2,997,108 - A4249_RS14800 0.63 -0.7
2,997,108 - A4249_RS14800 0.63 +1.1
2,997,108 - A4249_RS14800 0.63 +1.0
2,997,108 - A4249_RS14800 0.63 -0.7
2,997,215 + A4249_RS14800 0.76 +1.3
2,997,261 + A4249_RS14800 0.82 +1.1
2,997,284 + A4249_RS14800 0.85 +0.6
2,997,284 + A4249_RS14800 0.85 +1.6
2,997,284 + A4249_RS14800 0.85 -0.5
2,997,285 - A4249_RS14800 0.85 +2.2
2,997,285 - A4249_RS14800 0.85 +0.8
2,997,285 - A4249_RS14800 0.85 -0.2
2,997,285 - A4249_RS14800 0.85 +0.0
2,997,354 - -0.0
2,997,354 - +0.0
2,997,354 - -0.4
2,997,354 - +1.1
2,997,441 + +0.2
2,997,441 + +1.7
2,997,441 + -1.5
2,997,441 + -2.4
2,997,442 - +1.6
2,997,442 - +0.2
2,997,442 - -0.8
2,997,505 + +0.9
2,997,505 + +0.5
2,997,505 + +1.2
2,997,505 + -0.2
2,997,505 + +0.8
2,997,505 + -0.8
2,997,505 + -0.9
2,997,505 + +0.5
2,997,505 + +1.1
2,997,506 - +1.3
2,997,506 - +2.1
2,997,506 - +0.8
2,997,506 - +2.3
2,997,516 + -0.5
2,997,516 + -0.2

Or see this region's nucleotide sequence