Experiment: D-Glucose (C); 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS14770 and A4249_RS14775 are separated by 102 nucleotides A4249_RS14775 and A4249_RS14780 overlap by 4 nucleotides A4249_RS14780 and A4249_RS14785 are separated by 203 nucleotides
A4249_RS14770: A4249_RS14770 - sensor histidine kinase, at 2,991,160 to 2,992,854
_RS14770
A4249_RS14775: A4249_RS14775 - sigma-70 family RNA polymerase sigma factor, at 2,992,957 to 2,993,568
_RS14775
A4249_RS14780: A4249_RS14780 - NepR family anti-sigma factor, at 2,993,565 to 2,993,765
_RS14780
A4249_RS14785: A4249_RS14785 - response regulator, at 2,993,969 to 2,994,763
_RS14785
Position (kb)
2992
2993
2994 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 2993.142 kb on - strand, within A4249_RS14775 at 2993.324 kb on + strand, within A4249_RS14775 at 2993.325 kb on - strand, within A4249_RS14775 at 2993.325 kb on - strand, within A4249_RS14775 at 2993.325 kb on - strand, within A4249_RS14775 at 2993.325 kb on - strand, within A4249_RS14775 at 2993.325 kb on - strand, within A4249_RS14775 at 2993.325 kb on - strand, within A4249_RS14775 at 2993.381 kb on + strand, within A4249_RS14775 at 2993.382 kb on - strand, within A4249_RS14775 at 2993.382 kb on - strand, within A4249_RS14775 at 2993.382 kb on - strand, within A4249_RS14775 at 2993.604 kb on + strand, within A4249_RS14780 at 2993.605 kb on - strand, within A4249_RS14780 at 2993.605 kb on - strand, within A4249_RS14780 at 2993.658 kb on - strand, within A4249_RS14780 at 2993.658 kb on - strand, within A4249_RS14780 at 2993.766 kb on - strand at 2993.766 kb on - strand at 2993.766 kb on - strand at 2993.766 kb on - strand at 2993.856 kb on + strand at 2993.857 kb on - strand at 2993.857 kb on - strand at 2993.863 kb on - strand at 2993.907 kb on + strand at 2993.908 kb on - strand at 2993.916 kb on + strand at 2993.916 kb on + strand at 2993.917 kb on - strand at 2993.917 kb on - strand at 2993.962 kb on + strand at 2993.962 kb on + strand at 2993.962 kb on + strand at 2993.963 kb on - strand at 2993.963 kb on - strand at 2994.005 kb on + strand at 2994.005 kb on + strand at 2994.005 kb on + strand at 2994.006 kb on - strand at 2994.006 kb on - strand at 2994.006 kb on - strand at 2994.006 kb on - strand at 2994.006 kb on - strand at 2994.017 kb on + strand at 2994.018 kb on - strand at 2994.059 kb on + strand, within A4249_RS14785 at 2994.059 kb on + strand, within A4249_RS14785 at 2994.059 kb on + strand, within A4249_RS14785 at 2994.059 kb on + strand, within A4249_RS14785 at 2994.059 kb on + strand, within A4249_RS14785 at 2994.059 kb on + strand, within A4249_RS14785 at 2994.059 kb on + strand, within A4249_RS14785 at 2994.059 kb on + strand, within A4249_RS14785 at 2994.059 kb on + strand, within A4249_RS14785 at 2994.059 kb on + strand, within A4249_RS14785 at 2994.059 kb on + strand, within A4249_RS14785 at 2994.059 kb on + strand, within A4249_RS14785 at 2994.059 kb on + strand, within A4249_RS14785 at 2994.059 kb on + strand, within A4249_RS14785 at 2994.059 kb on + strand, within A4249_RS14785 at 2994.059 kb on + strand, within A4249_RS14785 at 2994.059 kb on + strand, within A4249_RS14785 at 2994.059 kb on + strand, within A4249_RS14785 at 2994.060 kb on - strand, within A4249_RS14785 at 2994.060 kb on - strand, within A4249_RS14785 at 2994.060 kb on - strand, within A4249_RS14785 at 2994.060 kb on - strand, within A4249_RS14785 at 2994.060 kb on - strand, within A4249_RS14785 at 2994.060 kb on - strand, within A4249_RS14785 at 2994.060 kb on - strand, within A4249_RS14785 at 2994.060 kb on - strand, within A4249_RS14785 at 2994.060 kb on - strand, within A4249_RS14785 at 2994.060 kb on - strand, within A4249_RS14785 at 2994.060 kb on - strand, within A4249_RS14785 at 2994.060 kb on - strand, within A4249_RS14785 at 2994.060 kb on - strand, within A4249_RS14785 at 2994.060 kb on - strand, within A4249_RS14785 at 2994.060 kb on - strand, within A4249_RS14785 at 2994.115 kb on + strand, within A4249_RS14785 at 2994.116 kb on - strand, within A4249_RS14785 at 2994.137 kb on + strand, within A4249_RS14785 at 2994.137 kb on + strand, within A4249_RS14785 at 2994.137 kb on + strand, within A4249_RS14785 at 2994.137 kb on + strand, within A4249_RS14785 at 2994.137 kb on + strand, within A4249_RS14785 at 2994.137 kb on + strand, within A4249_RS14785 at 2994.137 kb on + strand, within A4249_RS14785 at 2994.137 kb on + strand, within A4249_RS14785 at 2994.137 kb on + strand, within A4249_RS14785 at 2994.137 kb on + strand, within A4249_RS14785 at 2994.137 kb on + strand, within A4249_RS14785 at 2994.137 kb on + strand, within A4249_RS14785 at 2994.137 kb on + strand, within A4249_RS14785 at 2994.137 kb on + strand, within A4249_RS14785 at 2994.137 kb on + strand, within A4249_RS14785 at 2994.138 kb on - strand, within A4249_RS14785 at 2994.138 kb on - strand, within A4249_RS14785 at 2994.138 kb on - strand, within A4249_RS14785 at 2994.138 kb on - strand, within A4249_RS14785 at 2994.138 kb on - strand, within A4249_RS14785 at 2994.138 kb on - strand, within A4249_RS14785
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 30C remove 2,993,142 - A4249_RS14775 0.30 +4.2 2,993,324 + A4249_RS14775 0.60 +3.4 2,993,325 - A4249_RS14775 0.60 +3.7 2,993,325 - A4249_RS14775 0.60 +3.7 2,993,325 - A4249_RS14775 0.60 -1.6 2,993,325 - A4249_RS14775 0.60 +3.4 2,993,325 - A4249_RS14775 0.60 +3.4 2,993,325 - A4249_RS14775 0.60 +3.3 2,993,381 + A4249_RS14775 0.69 +3.3 2,993,382 - A4249_RS14775 0.69 +3.7 2,993,382 - A4249_RS14775 0.69 +4.1 2,993,382 - A4249_RS14775 0.69 +3.5 2,993,604 + A4249_RS14780 0.19 +1.3 2,993,605 - A4249_RS14780 0.20 +3.9 2,993,605 - A4249_RS14780 0.20 +4.3 2,993,658 - A4249_RS14780 0.46 -0.1 2,993,658 - A4249_RS14780 0.46 +0.9 2,993,766 - +1.8 2,993,766 - -0.2 2,993,766 - +1.6 2,993,766 - +1.3 2,993,856 + -1.9 2,993,857 - +1.3 2,993,857 - +0.8 2,993,863 - +2.4 2,993,907 + +0.8 2,993,908 - +3.9 2,993,916 + +2.8 2,993,916 + +1.7 2,993,917 - +3.6 2,993,917 - +3.7 2,993,962 + +3.8 2,993,962 + +4.0 2,993,962 + +3.8 2,993,963 - +3.6 2,993,963 - +3.7 2,994,005 + +3.7 2,994,005 + +3.6 2,994,005 + +3.6 2,994,006 - +3.8 2,994,006 - +3.7 2,994,006 - +3.8 2,994,006 - +3.9 2,994,006 - +3.6 2,994,017 + +3.7 2,994,018 - +4.1 2,994,059 + A4249_RS14785 0.11 +3.5 2,994,059 + A4249_RS14785 0.11 +3.8 2,994,059 + A4249_RS14785 0.11 +3.7 2,994,059 + A4249_RS14785 0.11 +4.1 2,994,059 + A4249_RS14785 0.11 +3.5 2,994,059 + A4249_RS14785 0.11 +3.6 2,994,059 + A4249_RS14785 0.11 +3.6 2,994,059 + A4249_RS14785 0.11 +3.5 2,994,059 + A4249_RS14785 0.11 +3.4 2,994,059 + A4249_RS14785 0.11 +3.3 2,994,059 + A4249_RS14785 0.11 +3.8 2,994,059 + A4249_RS14785 0.11 +3.4 2,994,059 + A4249_RS14785 0.11 +3.7 2,994,059 + A4249_RS14785 0.11 +3.7 2,994,059 + A4249_RS14785 0.11 +3.7 2,994,059 + A4249_RS14785 0.11 +3.8 2,994,059 + A4249_RS14785 0.11 +3.8 2,994,059 + A4249_RS14785 0.11 +3.7 2,994,060 - A4249_RS14785 0.11 +3.6 2,994,060 - A4249_RS14785 0.11 +3.9 2,994,060 - A4249_RS14785 0.11 +3.7 2,994,060 - A4249_RS14785 0.11 +3.7 2,994,060 - A4249_RS14785 0.11 +3.9 2,994,060 - A4249_RS14785 0.11 +3.4 2,994,060 - A4249_RS14785 0.11 +3.7 2,994,060 - A4249_RS14785 0.11 +3.5 2,994,060 - A4249_RS14785 0.11 +3.6 2,994,060 - A4249_RS14785 0.11 +4.0 2,994,060 - A4249_RS14785 0.11 +3.7 2,994,060 - A4249_RS14785 0.11 +3.9 2,994,060 - A4249_RS14785 0.11 +3.7 2,994,060 - A4249_RS14785 0.11 +3.8 2,994,060 - A4249_RS14785 0.11 +3.8 2,994,115 + A4249_RS14785 0.18 +3.8 2,994,116 - A4249_RS14785 0.18 +3.7 2,994,137 + A4249_RS14785 0.21 +3.9 2,994,137 + A4249_RS14785 0.21 +3.7 2,994,137 + A4249_RS14785 0.21 +3.6 2,994,137 + A4249_RS14785 0.21 +3.7 2,994,137 + A4249_RS14785 0.21 +3.6 2,994,137 + A4249_RS14785 0.21 +3.7 2,994,137 + A4249_RS14785 0.21 +3.5 2,994,137 + A4249_RS14785 0.21 +3.3 2,994,137 + A4249_RS14785 0.21 +3.7 2,994,137 + A4249_RS14785 0.21 +3.9 2,994,137 + A4249_RS14785 0.21 +3.5 2,994,137 + A4249_RS14785 0.21 +3.6 2,994,137 + A4249_RS14785 0.21 +3.3 2,994,137 + A4249_RS14785 0.21 +3.7 2,994,137 + A4249_RS14785 0.21 +3.9 2,994,138 - A4249_RS14785 0.21 +3.7 2,994,138 - A4249_RS14785 0.21 +3.7 2,994,138 - A4249_RS14785 0.21 +3.8 2,994,138 - A4249_RS14785 0.21 +3.9 2,994,138 - A4249_RS14785 0.21 +3.8 2,994,138 - A4249_RS14785 0.21 +3.5
Or see this region's nucleotide sequence