Experiment: D-Glucose (C); 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS14730 and A4249_RS14735 overlap by 4 nucleotides A4249_RS14735 and A4249_RS14740 are separated by 46 nucleotides A4249_RS14740 and A4249_RS14745 are separated by 49 nucleotides
A4249_RS14730: A4249_RS14730 - GNAT family N-acetyltransferase, at 2,983,754 to 2,984,197
_RS14730
A4249_RS14735: A4249_RS14735 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB, at 2,984,194 to 2,984,874
_RS14735
A4249_RS14740: A4249_RS14740 - NifU family protein, at 2,984,921 to 2,985,481
_RS14740
A4249_RS14745: A4249_RS14745 - DUF853 family protein, at 2,985,531 to 2,987,093
_RS14745
Position (kb)
2984
2985
2986 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2984.093 kb on + strand, within A4249_RS14730 at 2984.262 kb on - strand, within A4249_RS14735 at 2984.885 kb on + strand at 2984.885 kb on + strand at 2984.886 kb on - strand at 2984.886 kb on - strand at 2984.958 kb on + strand at 2984.958 kb on + strand at 2984.958 kb on + strand at 2984.959 kb on - strand at 2984.959 kb on - strand at 2984.959 kb on - strand at 2984.959 kb on - strand at 2984.959 kb on - strand at 2984.959 kb on - strand at 2984.959 kb on - strand at 2984.959 kb on - strand at 2985.303 kb on + strand, within A4249_RS14740 at 2985.303 kb on + strand, within A4249_RS14740 at 2985.303 kb on + strand, within A4249_RS14740 at 2985.303 kb on + strand, within A4249_RS14740 at 2985.304 kb on - strand, within A4249_RS14740 at 2985.304 kb on - strand, within A4249_RS14740 at 2985.304 kb on - strand, within A4249_RS14740 at 2985.394 kb on - strand, within A4249_RS14740 at 2985.532 kb on + strand at 2985.532 kb on + strand at 2985.532 kb on + strand at 2985.532 kb on + strand at 2985.533 kb on - strand at 2985.533 kb on - strand at 2985.862 kb on + strand, within A4249_RS14745 at 2985.862 kb on + strand, within A4249_RS14745 at 2985.862 kb on + strand, within A4249_RS14745 at 2985.908 kb on + strand, within A4249_RS14745 at 2986.106 kb on + strand, within A4249_RS14745 at 2986.106 kb on + strand, within A4249_RS14745 at 2986.106 kb on + strand, within A4249_RS14745 at 2986.106 kb on + strand, within A4249_RS14745 at 2986.106 kb on + strand, within A4249_RS14745 at 2986.106 kb on + strand, within A4249_RS14745 at 2986.106 kb on + strand, within A4249_RS14745 at 2986.107 kb on - strand, within A4249_RS14745 at 2986.107 kb on - strand, within A4249_RS14745 at 2986.107 kb on - strand, within A4249_RS14745 at 2986.107 kb on - strand, within A4249_RS14745 at 2986.108 kb on + strand, within A4249_RS14745 at 2986.109 kb on - strand, within A4249_RS14745 at 2986.109 kb on - strand, within A4249_RS14745 at 2986.109 kb on - strand, within A4249_RS14745 at 2986.192 kb on + strand, within A4249_RS14745 at 2986.192 kb on + strand, within A4249_RS14745 at 2986.193 kb on - strand, within A4249_RS14745 at 2986.193 kb on - strand, within A4249_RS14745 at 2986.381 kb on + strand, within A4249_RS14745 at 2986.381 kb on + strand, within A4249_RS14745 at 2986.381 kb on + strand, within A4249_RS14745 at 2986.382 kb on - strand, within A4249_RS14745
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 30C remove 2,984,093 + A4249_RS14730 0.76 -0.5 2,984,262 - A4249_RS14735 0.10 -2.0 2,984,885 + -0.8 2,984,885 + -0.2 2,984,886 - +1.3 2,984,886 - -0.4 2,984,958 + -2.5 2,984,958 + -2.2 2,984,958 + -2.2 2,984,959 - -1.2 2,984,959 - -2.2 2,984,959 - -2.0 2,984,959 - -1.2 2,984,959 - -3.6 2,984,959 - -1.7 2,984,959 - -1.7 2,984,959 - -3.7 2,985,303 + A4249_RS14740 0.68 -3.4 2,985,303 + A4249_RS14740 0.68 -3.2 2,985,303 + A4249_RS14740 0.68 -3.4 2,985,303 + A4249_RS14740 0.68 -3.1 2,985,304 - A4249_RS14740 0.68 -4.0 2,985,304 - A4249_RS14740 0.68 -3.2 2,985,304 - A4249_RS14740 0.68 -1.2 2,985,394 - A4249_RS14740 0.84 -4.7 2,985,532 + +1.1 2,985,532 + -0.2 2,985,532 + -1.2 2,985,532 + -0.4 2,985,533 - -1.2 2,985,533 - -0.6 2,985,862 + A4249_RS14745 0.21 +0.8 2,985,862 + A4249_RS14745 0.21 +0.9 2,985,862 + A4249_RS14745 0.21 -1.2 2,985,908 + A4249_RS14745 0.24 +1.5 2,986,106 + A4249_RS14745 0.37 +1.4 2,986,106 + A4249_RS14745 0.37 -0.3 2,986,106 + A4249_RS14745 0.37 -0.4 2,986,106 + A4249_RS14745 0.37 -0.4 2,986,106 + A4249_RS14745 0.37 -1.0 2,986,106 + A4249_RS14745 0.37 +0.2 2,986,106 + A4249_RS14745 0.37 +1.9 2,986,107 - A4249_RS14745 0.37 -0.6 2,986,107 - A4249_RS14745 0.37 -0.3 2,986,107 - A4249_RS14745 0.37 +0.1 2,986,107 - A4249_RS14745 0.37 +0.8 2,986,108 + A4249_RS14745 0.37 -1.6 2,986,109 - A4249_RS14745 0.37 -0.0 2,986,109 - A4249_RS14745 0.37 +0.0 2,986,109 - A4249_RS14745 0.37 +0.6 2,986,192 + A4249_RS14745 0.42 -2.1 2,986,192 + A4249_RS14745 0.42 -0.1 2,986,193 - A4249_RS14745 0.42 -0.9 2,986,193 - A4249_RS14745 0.42 -0.9 2,986,381 + A4249_RS14745 0.54 +0.1 2,986,381 + A4249_RS14745 0.54 -0.1 2,986,381 + A4249_RS14745 0.54 +0.4 2,986,382 - A4249_RS14745 0.54 +0.4
Or see this region's nucleotide sequence