Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14740

Experiment: D-Glucose (C); 30C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14730 and A4249_RS14735 overlap by 4 nucleotidesA4249_RS14735 and A4249_RS14740 are separated by 46 nucleotidesA4249_RS14740 and A4249_RS14745 are separated by 49 nucleotides A4249_RS14730: A4249_RS14730 - GNAT family N-acetyltransferase, at 2,983,754 to 2,984,197 _RS14730 A4249_RS14735: A4249_RS14735 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB, at 2,984,194 to 2,984,874 _RS14735 A4249_RS14740: A4249_RS14740 - NifU family protein, at 2,984,921 to 2,985,481 _RS14740 A4249_RS14745: A4249_RS14745 - DUF853 family protein, at 2,985,531 to 2,987,093 _RS14745 Position (kb) 2984 2985 2986Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 2984.093 kb on + strand, within A4249_RS14730at 2984.262 kb on - strand, within A4249_RS14735at 2984.885 kb on + strandat 2984.885 kb on + strandat 2984.886 kb on - strandat 2984.886 kb on - strandat 2984.958 kb on + strandat 2984.958 kb on + strandat 2984.958 kb on + strandat 2984.959 kb on - strandat 2984.959 kb on - strandat 2984.959 kb on - strandat 2984.959 kb on - strandat 2984.959 kb on - strandat 2984.959 kb on - strandat 2984.959 kb on - strandat 2984.959 kb on - strandat 2985.303 kb on + strand, within A4249_RS14740at 2985.303 kb on + strand, within A4249_RS14740at 2985.303 kb on + strand, within A4249_RS14740at 2985.303 kb on + strand, within A4249_RS14740at 2985.304 kb on - strand, within A4249_RS14740at 2985.304 kb on - strand, within A4249_RS14740at 2985.304 kb on - strand, within A4249_RS14740at 2985.394 kb on - strand, within A4249_RS14740at 2985.532 kb on + strandat 2985.532 kb on + strandat 2985.532 kb on + strandat 2985.532 kb on + strandat 2985.533 kb on - strandat 2985.533 kb on - strandat 2985.862 kb on + strand, within A4249_RS14745at 2985.862 kb on + strand, within A4249_RS14745at 2985.862 kb on + strand, within A4249_RS14745at 2985.908 kb on + strand, within A4249_RS14745at 2986.106 kb on + strand, within A4249_RS14745at 2986.106 kb on + strand, within A4249_RS14745at 2986.106 kb on + strand, within A4249_RS14745at 2986.106 kb on + strand, within A4249_RS14745at 2986.106 kb on + strand, within A4249_RS14745at 2986.106 kb on + strand, within A4249_RS14745at 2986.106 kb on + strand, within A4249_RS14745at 2986.107 kb on - strand, within A4249_RS14745at 2986.107 kb on - strand, within A4249_RS14745at 2986.107 kb on - strand, within A4249_RS14745at 2986.107 kb on - strand, within A4249_RS14745at 2986.108 kb on + strand, within A4249_RS14745at 2986.109 kb on - strand, within A4249_RS14745at 2986.109 kb on - strand, within A4249_RS14745at 2986.109 kb on - strand, within A4249_RS14745at 2986.192 kb on + strand, within A4249_RS14745at 2986.192 kb on + strand, within A4249_RS14745at 2986.193 kb on - strand, within A4249_RS14745at 2986.193 kb on - strand, within A4249_RS14745at 2986.381 kb on + strand, within A4249_RS14745at 2986.381 kb on + strand, within A4249_RS14745at 2986.381 kb on + strand, within A4249_RS14745at 2986.382 kb on - strand, within A4249_RS14745

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C); 30C
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2,984,093 + A4249_RS14730 0.76 -0.5
2,984,262 - A4249_RS14735 0.10 -2.0
2,984,885 + -0.8
2,984,885 + -0.2
2,984,886 - +1.3
2,984,886 - -0.4
2,984,958 + -2.5
2,984,958 + -2.2
2,984,958 + -2.2
2,984,959 - -1.2
2,984,959 - -2.2
2,984,959 - -2.0
2,984,959 - -1.2
2,984,959 - -3.6
2,984,959 - -1.7
2,984,959 - -1.7
2,984,959 - -3.7
2,985,303 + A4249_RS14740 0.68 -3.4
2,985,303 + A4249_RS14740 0.68 -3.2
2,985,303 + A4249_RS14740 0.68 -3.4
2,985,303 + A4249_RS14740 0.68 -3.1
2,985,304 - A4249_RS14740 0.68 -4.0
2,985,304 - A4249_RS14740 0.68 -3.2
2,985,304 - A4249_RS14740 0.68 -1.2
2,985,394 - A4249_RS14740 0.84 -4.7
2,985,532 + +1.1
2,985,532 + -0.2
2,985,532 + -1.2
2,985,532 + -0.4
2,985,533 - -1.2
2,985,533 - -0.6
2,985,862 + A4249_RS14745 0.21 +0.8
2,985,862 + A4249_RS14745 0.21 +0.9
2,985,862 + A4249_RS14745 0.21 -1.2
2,985,908 + A4249_RS14745 0.24 +1.5
2,986,106 + A4249_RS14745 0.37 +1.4
2,986,106 + A4249_RS14745 0.37 -0.3
2,986,106 + A4249_RS14745 0.37 -0.4
2,986,106 + A4249_RS14745 0.37 -0.4
2,986,106 + A4249_RS14745 0.37 -1.0
2,986,106 + A4249_RS14745 0.37 +0.2
2,986,106 + A4249_RS14745 0.37 +1.9
2,986,107 - A4249_RS14745 0.37 -0.6
2,986,107 - A4249_RS14745 0.37 -0.3
2,986,107 - A4249_RS14745 0.37 +0.1
2,986,107 - A4249_RS14745 0.37 +0.8
2,986,108 + A4249_RS14745 0.37 -1.6
2,986,109 - A4249_RS14745 0.37 -0.0
2,986,109 - A4249_RS14745 0.37 +0.0
2,986,109 - A4249_RS14745 0.37 +0.6
2,986,192 + A4249_RS14745 0.42 -2.1
2,986,192 + A4249_RS14745 0.42 -0.1
2,986,193 - A4249_RS14745 0.42 -0.9
2,986,193 - A4249_RS14745 0.42 -0.9
2,986,381 + A4249_RS14745 0.54 +0.1
2,986,381 + A4249_RS14745 0.54 -0.1
2,986,381 + A4249_RS14745 0.54 +0.4
2,986,382 - A4249_RS14745 0.54 +0.4

Or see this region's nucleotide sequence