Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14465

Experiment: D-Glucose (C); 30C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14455 and A4249_RS14460 are separated by 58 nucleotidesA4249_RS14460 and A4249_RS14465 are separated by 33 nucleotidesA4249_RS14465 and A4249_RS14470 are separated by 61 nucleotidesA4249_RS14470 and A4249_RS14475 are separated by 129 nucleotides A4249_RS14455: A4249_RS14455 - response regulator, at 2,925,139 to 2,925,744 _RS14455 A4249_RS14460: A4249_RS14460 - Rrf2 family transcriptional regulator, at 2,925,803 to 2,926,243 _RS14460 A4249_RS14465: A4249_RS14465 - sulfite exporter TauE/SafE family protein, at 2,926,277 to 2,927,053 _RS14465 A4249_RS14470: A4249_RS14470 - PEGA domain-containing protein, at 2,927,115 to 2,927,582 _RS14470 A4249_RS14475: A4249_RS14475 - flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase, at 2,927,712 to 2,928,848 _RS14475 Position (kb) 2926 2927 2928Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1 2at 2925.292 kb on + strand, within A4249_RS14455at 2925.292 kb on + strand, within A4249_RS14455at 2925.292 kb on + strand, within A4249_RS14455at 2925.292 kb on + strand, within A4249_RS14455at 2925.292 kb on + strand, within A4249_RS14455at 2925.292 kb on + strand, within A4249_RS14455at 2925.292 kb on + strand, within A4249_RS14455at 2925.293 kb on - strand, within A4249_RS14455at 2925.293 kb on - strand, within A4249_RS14455at 2925.293 kb on - strand, within A4249_RS14455at 2925.293 kb on - strand, within A4249_RS14455at 2925.293 kb on - strand, within A4249_RS14455at 2925.293 kb on - strand, within A4249_RS14455at 2925.700 kb on + strandat 2925.700 kb on + strandat 2925.700 kb on + strandat 2925.700 kb on + strandat 2925.701 kb on - strandat 2925.701 kb on - strandat 2925.701 kb on - strandat 2925.701 kb on - strandat 2925.702 kb on + strandat 2925.702 kb on + strandat 2926.349 kb on + strandat 2926.350 kb on - strandat 2926.350 kb on - strandat 2926.462 kb on + strand, within A4249_RS14465at 2926.462 kb on + strand, within A4249_RS14465at 2926.463 kb on - strand, within A4249_RS14465at 2926.592 kb on + strand, within A4249_RS14465at 2926.592 kb on + strand, within A4249_RS14465at 2926.592 kb on + strand, within A4249_RS14465at 2926.592 kb on + strand, within A4249_RS14465at 2926.592 kb on + strand, within A4249_RS14465at 2926.592 kb on + strand, within A4249_RS14465at 2926.592 kb on + strand, within A4249_RS14465at 2926.592 kb on + strand, within A4249_RS14465at 2926.592 kb on + strand, within A4249_RS14465at 2926.592 kb on + strand, within A4249_RS14465at 2926.592 kb on + strand, within A4249_RS14465at 2926.593 kb on - strand, within A4249_RS14465at 2926.593 kb on - strand, within A4249_RS14465at 2926.593 kb on - strand, within A4249_RS14465at 2926.593 kb on - strand, within A4249_RS14465at 2926.593 kb on - strand, within A4249_RS14465at 2926.593 kb on - strand, within A4249_RS14465at 2926.593 kb on - strand, within A4249_RS14465at 2926.593 kb on - strand, within A4249_RS14465at 2926.593 kb on - strand, within A4249_RS14465at 2926.593 kb on - strand, within A4249_RS14465at 2926.593 kb on - strand, within A4249_RS14465at 2926.593 kb on - strand, within A4249_RS14465at 2926.593 kb on - strand, within A4249_RS14465at 2926.795 kb on + strand, within A4249_RS14465at 2926.795 kb on + strand, within A4249_RS14465at 2926.796 kb on - strand, within A4249_RS14465at 2926.985 kb on + strandat 2926.986 kb on - strandat 2926.986 kb on - strandat 2926.986 kb on - strandat 2927.276 kb on + strand, within A4249_RS14470at 2927.276 kb on + strand, within A4249_RS14470at 2927.277 kb on - strand, within A4249_RS14470at 2927.277 kb on - strand, within A4249_RS14470at 2927.277 kb on - strand, within A4249_RS14470at 2927.344 kb on + strand, within A4249_RS14470at 2927.344 kb on + strand, within A4249_RS14470at 2927.344 kb on + strand, within A4249_RS14470at 2927.344 kb on + strand, within A4249_RS14470at 2927.344 kb on + strand, within A4249_RS14470at 2927.344 kb on + strand, within A4249_RS14470at 2927.344 kb on + strand, within A4249_RS14470at 2927.344 kb on + strand, within A4249_RS14470at 2927.344 kb on + strand, within A4249_RS14470at 2927.344 kb on + strand, within A4249_RS14470at 2927.344 kb on + strand, within A4249_RS14470at 2927.344 kb on + strand, within A4249_RS14470at 2927.345 kb on - strand, within A4249_RS14470at 2927.345 kb on - strand, within A4249_RS14470at 2927.345 kb on - strand, within A4249_RS14470at 2927.345 kb on - strand, within A4249_RS14470at 2927.345 kb on - strand, within A4249_RS14470at 2927.345 kb on - strand, within A4249_RS14470at 2927.345 kb on - strand, within A4249_RS14470at 2927.345 kb on - strand, within A4249_RS14470at 2927.714 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C); 30C
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2,925,292 + A4249_RS14455 0.25 +2.5
2,925,292 + A4249_RS14455 0.25 +1.1
2,925,292 + A4249_RS14455 0.25 +0.3
2,925,292 + A4249_RS14455 0.25 -0.9
2,925,292 + A4249_RS14455 0.25 -0.4
2,925,292 + A4249_RS14455 0.25 +0.7
2,925,292 + A4249_RS14455 0.25 -0.2
2,925,293 - A4249_RS14455 0.25 -1.2
2,925,293 - A4249_RS14455 0.25 -0.6
2,925,293 - A4249_RS14455 0.25 -1.6
2,925,293 - A4249_RS14455 0.25 +1.6
2,925,293 - A4249_RS14455 0.25 +0.8
2,925,293 - A4249_RS14455 0.25 -0.8
2,925,700 + -0.5
2,925,700 + +0.0
2,925,700 + -0.8
2,925,700 + +0.2
2,925,701 - +0.5
2,925,701 - -0.2
2,925,701 - -0.4
2,925,701 - -1.8
2,925,702 + +1.1
2,925,702 + +0.6
2,926,349 + +0.4
2,926,350 - -1.6
2,926,350 - -3.1
2,926,462 + A4249_RS14465 0.24 -4.0
2,926,462 + A4249_RS14465 0.24 -3.6
2,926,463 - A4249_RS14465 0.24 -3.4
2,926,592 + A4249_RS14465 0.41 -6.4
2,926,592 + A4249_RS14465 0.41 -2.6
2,926,592 + A4249_RS14465 0.41 -4.3
2,926,592 + A4249_RS14465 0.41 -3.1
2,926,592 + A4249_RS14465 0.41 -2.4
2,926,592 + A4249_RS14465 0.41 -3.8
2,926,592 + A4249_RS14465 0.41 -3.0
2,926,592 + A4249_RS14465 0.41 -3.2
2,926,592 + A4249_RS14465 0.41 -0.6
2,926,592 + A4249_RS14465 0.41 -3.7
2,926,592 + A4249_RS14465 0.41 -3.1
2,926,593 - A4249_RS14465 0.41 -1.2
2,926,593 - A4249_RS14465 0.41 -2.4
2,926,593 - A4249_RS14465 0.41 -5.6
2,926,593 - A4249_RS14465 0.41 -3.1
2,926,593 - A4249_RS14465 0.41 -2.4
2,926,593 - A4249_RS14465 0.41 -4.4
2,926,593 - A4249_RS14465 0.41 -4.3
2,926,593 - A4249_RS14465 0.41 -2.9
2,926,593 - A4249_RS14465 0.41 -4.8
2,926,593 - A4249_RS14465 0.41 -4.4
2,926,593 - A4249_RS14465 0.41 -1.2
2,926,593 - A4249_RS14465 0.41 -3.8
2,926,593 - A4249_RS14465 0.41 -3.3
2,926,795 + A4249_RS14465 0.67 +0.4
2,926,795 + A4249_RS14465 0.67 -2.8
2,926,796 - A4249_RS14465 0.67 -4.7
2,926,985 + -5.3
2,926,986 - -3.9
2,926,986 - -4.0
2,926,986 - -4.7
2,927,276 + A4249_RS14470 0.34 -2.0
2,927,276 + A4249_RS14470 0.34 -0.1
2,927,277 - A4249_RS14470 0.35 +0.4
2,927,277 - A4249_RS14470 0.35 +0.4
2,927,277 - A4249_RS14470 0.35 +0.4
2,927,344 + A4249_RS14470 0.49 -0.8
2,927,344 + A4249_RS14470 0.49 +0.7
2,927,344 + A4249_RS14470 0.49 +0.9
2,927,344 + A4249_RS14470 0.49 -0.3
2,927,344 + A4249_RS14470 0.49 +2.0
2,927,344 + A4249_RS14470 0.49 +0.2
2,927,344 + A4249_RS14470 0.49 -1.2
2,927,344 + A4249_RS14470 0.49 +0.2
2,927,344 + A4249_RS14470 0.49 +0.7
2,927,344 + A4249_RS14470 0.49 +0.5
2,927,344 + A4249_RS14470 0.49 +1.4
2,927,344 + A4249_RS14470 0.49 -0.5
2,927,345 - A4249_RS14470 0.49 +0.0
2,927,345 - A4249_RS14470 0.49 -0.0
2,927,345 - A4249_RS14470 0.49 +0.4
2,927,345 - A4249_RS14470 0.49 +0.4
2,927,345 - A4249_RS14470 0.49 +0.5
2,927,345 - A4249_RS14470 0.49 +0.6
2,927,345 - A4249_RS14470 0.49 -1.2
2,927,345 - A4249_RS14470 0.49 -0.7
2,927,714 - -0.3

Or see this region's nucleotide sequence