Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14295

Experiment: D-Glucose (C); 30C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14290 and A4249_RS14295 are separated by 273 nucleotidesA4249_RS14295 and A4249_RS14300 are separated by 216 nucleotides A4249_RS14290: A4249_RS14290 - phosphatase PAP2 family protein, at 2,880,421 to 2,881,197 _RS14290 A4249_RS14295: A4249_RS14295 - ribonucleoside-diphosphate reductase subunit alpha, at 2,881,471 to 2,883,360 _RS14295 A4249_RS14300: A4249_RS14300 - DUF2219 family protein, at 2,883,577 to 2,884,383 _RS14300 Position (kb) 2881 2882 2883 2884Strain fitness (log2 ratio) -2 -1 0 1 2at 2880.512 kb on + strand, within A4249_RS14290at 2880.513 kb on - strand, within A4249_RS14290at 2880.596 kb on + strand, within A4249_RS14290at 2880.596 kb on + strand, within A4249_RS14290at 2880.596 kb on + strand, within A4249_RS14290at 2880.596 kb on + strand, within A4249_RS14290at 2880.596 kb on + strand, within A4249_RS14290at 2880.596 kb on + strand, within A4249_RS14290at 2880.596 kb on + strand, within A4249_RS14290at 2880.596 kb on + strand, within A4249_RS14290at 2880.596 kb on + strand, within A4249_RS14290at 2880.596 kb on + strand, within A4249_RS14290at 2880.596 kb on + strand, within A4249_RS14290at 2880.597 kb on - strand, within A4249_RS14290at 2880.597 kb on - strand, within A4249_RS14290at 2880.597 kb on - strand, within A4249_RS14290at 2880.597 kb on - strand, within A4249_RS14290at 2880.597 kb on - strand, within A4249_RS14290at 2880.597 kb on - strand, within A4249_RS14290at 2880.597 kb on - strand, within A4249_RS14290at 2880.597 kb on - strand, within A4249_RS14290at 2880.707 kb on + strand, within A4249_RS14290at 2880.707 kb on + strand, within A4249_RS14290at 2880.708 kb on - strand, within A4249_RS14290at 2880.708 kb on - strand, within A4249_RS14290at 2880.708 kb on - strand, within A4249_RS14290at 2880.708 kb on - strand, within A4249_RS14290at 2880.708 kb on - strand, within A4249_RS14290at 2880.708 kb on - strand, within A4249_RS14290at 2880.721 kb on + strand, within A4249_RS14290at 2880.721 kb on + strand, within A4249_RS14290at 2880.722 kb on - strand, within A4249_RS14290at 2880.922 kb on + strand, within A4249_RS14290at 2880.922 kb on + strand, within A4249_RS14290at 2880.922 kb on + strand, within A4249_RS14290at 2880.923 kb on - strand, within A4249_RS14290at 2880.923 kb on - strand, within A4249_RS14290at 2880.923 kb on - strand, within A4249_RS14290at 2880.923 kb on - strand, within A4249_RS14290at 2880.923 kb on - strand, within A4249_RS14290at 2880.923 kb on - strand, within A4249_RS14290at 2880.923 kb on - strand, within A4249_RS14290at 2880.970 kb on + strand, within A4249_RS14290at 2880.971 kb on - strand, within A4249_RS14290at 2881.010 kb on + strand, within A4249_RS14290at 2881.010 kb on + strand, within A4249_RS14290at 2881.010 kb on + strand, within A4249_RS14290at 2881.011 kb on - strand, within A4249_RS14290at 2881.011 kb on - strand, within A4249_RS14290at 2881.011 kb on - strand, within A4249_RS14290at 2881.165 kb on + strandat 2881.180 kb on + strandat 2881.385 kb on + strandat 2881.387 kb on + strandat 2881.387 kb on + strandat 2883.359 kb on - strandat 2883.539 kb on + strandat 2883.680 kb on + strand, within A4249_RS14300at 2883.901 kb on + strand, within A4249_RS14300at 2883.901 kb on + strand, within A4249_RS14300at 2883.913 kb on + strand, within A4249_RS14300at 2883.913 kb on + strand, within A4249_RS14300at 2883.913 kb on + strand, within A4249_RS14300at 2883.914 kb on - strand, within A4249_RS14300at 2883.914 kb on - strand, within A4249_RS14300at 2883.914 kb on - strand, within A4249_RS14300at 2884.105 kb on + strand, within A4249_RS14300at 2884.106 kb on - strand, within A4249_RS14300at 2884.106 kb on - strand, within A4249_RS14300at 2884.106 kb on - strand, within A4249_RS14300at 2884.106 kb on - strand, within A4249_RS14300at 2884.111 kb on + strand, within A4249_RS14300at 2884.111 kb on + strand, within A4249_RS14300at 2884.112 kb on - strand, within A4249_RS14300at 2884.112 kb on - strand, within A4249_RS14300at 2884.112 kb on - strand, within A4249_RS14300at 2884.112 kb on - strand, within A4249_RS14300at 2884.141 kb on + strand, within A4249_RS14300at 2884.142 kb on - strand, within A4249_RS14300at 2884.142 kb on - strand, within A4249_RS14300at 2884.172 kb on - strand, within A4249_RS14300at 2884.188 kb on + strand, within A4249_RS14300at 2884.189 kb on - strand, within A4249_RS14300at 2884.237 kb on + strand, within A4249_RS14300at 2884.237 kb on + strand, within A4249_RS14300

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C); 30C
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2,880,512 + A4249_RS14290 0.12 +0.5
2,880,513 - A4249_RS14290 0.12 +0.4
2,880,596 + A4249_RS14290 0.23 +0.8
2,880,596 + A4249_RS14290 0.23 +1.1
2,880,596 + A4249_RS14290 0.23 +2.0
2,880,596 + A4249_RS14290 0.23 -2.4
2,880,596 + A4249_RS14290 0.23 -0.4
2,880,596 + A4249_RS14290 0.23 -1.2
2,880,596 + A4249_RS14290 0.23 -2.0
2,880,596 + A4249_RS14290 0.23 +0.9
2,880,596 + A4249_RS14290 0.23 +0.2
2,880,596 + A4249_RS14290 0.23 +0.5
2,880,596 + A4249_RS14290 0.23 +2.4
2,880,597 - A4249_RS14290 0.23 -0.1
2,880,597 - A4249_RS14290 0.23 -0.1
2,880,597 - A4249_RS14290 0.23 +1.3
2,880,597 - A4249_RS14290 0.23 +0.3
2,880,597 - A4249_RS14290 0.23 -0.7
2,880,597 - A4249_RS14290 0.23 +0.1
2,880,597 - A4249_RS14290 0.23 +0.7
2,880,597 - A4249_RS14290 0.23 +1.0
2,880,707 + A4249_RS14290 0.37 +0.5
2,880,707 + A4249_RS14290 0.37 +1.4
2,880,708 - A4249_RS14290 0.37 -2.0
2,880,708 - A4249_RS14290 0.37 +0.4
2,880,708 - A4249_RS14290 0.37 +0.4
2,880,708 - A4249_RS14290 0.37 -0.6
2,880,708 - A4249_RS14290 0.37 -1.2
2,880,708 - A4249_RS14290 0.37 +0.4
2,880,721 + A4249_RS14290 0.39 +2.2
2,880,721 + A4249_RS14290 0.39 +0.4
2,880,722 - A4249_RS14290 0.39 -1.2
2,880,922 + A4249_RS14290 0.64 +2.0
2,880,922 + A4249_RS14290 0.64 +0.3
2,880,922 + A4249_RS14290 0.64 +1.5
2,880,923 - A4249_RS14290 0.65 -0.5
2,880,923 - A4249_RS14290 0.65 +0.6
2,880,923 - A4249_RS14290 0.65 +0.8
2,880,923 - A4249_RS14290 0.65 +1.4
2,880,923 - A4249_RS14290 0.65 +1.7
2,880,923 - A4249_RS14290 0.65 -0.9
2,880,923 - A4249_RS14290 0.65 +0.4
2,880,970 + A4249_RS14290 0.71 +1.6
2,880,971 - A4249_RS14290 0.71 -0.0
2,881,010 + A4249_RS14290 0.76 -1.1
2,881,010 + A4249_RS14290 0.76 -1.8
2,881,010 + A4249_RS14290 0.76 +0.9
2,881,011 - A4249_RS14290 0.76 -0.8
2,881,011 - A4249_RS14290 0.76 +2.1
2,881,011 - A4249_RS14290 0.76 -0.6
2,881,165 + -2.0
2,881,180 + +0.1
2,881,385 + -0.2
2,881,387 + +0.4
2,881,387 + -0.2
2,883,359 - +0.9
2,883,539 + -0.7
2,883,680 + A4249_RS14300 0.13 -0.4
2,883,901 + A4249_RS14300 0.40 +0.7
2,883,901 + A4249_RS14300 0.40 -0.1
2,883,913 + A4249_RS14300 0.42 +0.1
2,883,913 + A4249_RS14300 0.42 +0.7
2,883,913 + A4249_RS14300 0.42 -0.4
2,883,914 - A4249_RS14300 0.42 +1.2
2,883,914 - A4249_RS14300 0.42 +0.4
2,883,914 - A4249_RS14300 0.42 +0.9
2,884,105 + A4249_RS14300 0.65 +0.0
2,884,106 - A4249_RS14300 0.66 +0.1
2,884,106 - A4249_RS14300 0.66 -2.6
2,884,106 - A4249_RS14300 0.66 -0.4
2,884,106 - A4249_RS14300 0.66 -0.8
2,884,111 + A4249_RS14300 0.66 +0.6
2,884,111 + A4249_RS14300 0.66 +1.5
2,884,112 - A4249_RS14300 0.66 +0.3
2,884,112 - A4249_RS14300 0.66 +0.2
2,884,112 - A4249_RS14300 0.66 +0.4
2,884,112 - A4249_RS14300 0.66 -0.1
2,884,141 + A4249_RS14300 0.70 +1.5
2,884,142 - A4249_RS14300 0.70 +1.4
2,884,142 - A4249_RS14300 0.70 +0.6
2,884,172 - A4249_RS14300 0.74 -0.1
2,884,188 + A4249_RS14300 0.76 -1.0
2,884,189 - A4249_RS14300 0.76 +1.4
2,884,237 + A4249_RS14300 0.82 +0.0
2,884,237 + A4249_RS14300 0.82 +0.2

Or see this region's nucleotide sequence