Experiment: D-Glucose (C); 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS14050 and A4249_RS14055 are separated by 190 nucleotides A4249_RS14055 and A4249_RS14060 are separated by 66 nucleotides A4249_RS14060 and A4249_RS14065 are separated by 4 nucleotides A4249_RS14065 and A4249_RS14070 are separated by 43 nucleotides
A4249_RS14050: A4249_RS14050 - DUF885 domain-containing protein, at 2,833,715 to 2,835,550
_RS14050
A4249_RS14055: A4249_RS14055 - entericidin A/B family lipoprotein, at 2,835,741 to 2,835,878
_RS14055
A4249_RS14060: A4249_RS14060 - YidB family protein, at 2,835,945 to 2,836,376
_RS14060
A4249_RS14065: A4249_RS14065 - MFS transporter, at 2,836,381 to 2,838,147
_RS14065
A4249_RS14070: A4249_RS14070 - response regulator, at 2,838,191 to 2,839,729
_RS14070
Position (kb)
2836
2837
2838
2839 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2835.389 kb on - strand at 2835.720 kb on + strand at 2835.721 kb on + strand at 2835.721 kb on + strand at 2835.722 kb on - strand at 2835.722 kb on - strand at 2835.722 kb on - strand at 2835.876 kb on + strand at 2835.876 kb on + strand at 2835.876 kb on + strand at 2835.876 kb on + strand at 2835.876 kb on + strand at 2835.876 kb on + strand at 2835.876 kb on + strand at 2835.877 kb on - strand at 2835.877 kb on - strand at 2835.877 kb on - strand at 2835.877 kb on - strand at 2835.877 kb on - strand at 2835.877 kb on - strand at 2836.151 kb on + strand, within A4249_RS14060 at 2836.151 kb on + strand, within A4249_RS14060 at 2836.151 kb on + strand, within A4249_RS14060 at 2836.151 kb on + strand, within A4249_RS14060 at 2836.517 kb on + strand at 2836.518 kb on - strand at 2836.518 kb on - strand at 2836.535 kb on + strand at 2836.698 kb on + strand, within A4249_RS14065 at 2836.699 kb on - strand, within A4249_RS14065 at 2836.719 kb on - strand, within A4249_RS14065 at 2836.739 kb on + strand, within A4249_RS14065 at 2836.779 kb on + strand, within A4249_RS14065 at 2836.779 kb on + strand, within A4249_RS14065 at 2836.780 kb on - strand, within A4249_RS14065 at 2836.780 kb on - strand, within A4249_RS14065 at 2836.781 kb on + strand, within A4249_RS14065 at 2836.782 kb on - strand, within A4249_RS14065 at 2836.806 kb on - strand, within A4249_RS14065 at 2837.052 kb on - strand, within A4249_RS14065 at 2837.145 kb on - strand, within A4249_RS14065 at 2837.183 kb on + strand, within A4249_RS14065 at 2837.567 kb on + strand, within A4249_RS14065 at 2837.583 kb on + strand, within A4249_RS14065 at 2837.583 kb on + strand, within A4249_RS14065 at 2837.584 kb on - strand, within A4249_RS14065 at 2837.586 kb on - strand, within A4249_RS14065 at 2837.930 kb on + strand, within A4249_RS14065 at 2837.931 kb on - strand, within A4249_RS14065 at 2837.931 kb on - strand, within A4249_RS14065 at 2837.931 kb on - strand, within A4249_RS14065 at 2838.187 kb on + strand at 2838.187 kb on + strand at 2838.188 kb on - strand at 2838.854 kb on - strand, within A4249_RS14070
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 30C remove 2,835,389 - -0.5 2,835,720 + -0.2 2,835,721 + +0.8 2,835,721 + +0.2 2,835,722 - +0.4 2,835,722 - +0.6 2,835,722 - +0.4 2,835,876 + -0.5 2,835,876 + +1.2 2,835,876 + +1.7 2,835,876 + -0.5 2,835,876 + -0.6 2,835,876 + -0.5 2,835,876 + +2.1 2,835,877 - +0.7 2,835,877 - -0.6 2,835,877 - +0.7 2,835,877 - -1.4 2,835,877 - +1.2 2,835,877 - +0.1 2,836,151 + A4249_RS14060 0.48 +0.2 2,836,151 + A4249_RS14060 0.48 -0.7 2,836,151 + A4249_RS14060 0.48 +0.2 2,836,151 + A4249_RS14060 0.48 +0.9 2,836,517 + -1.2 2,836,518 - -2.0 2,836,518 - -1.6 2,836,535 + -2.2 2,836,698 + A4249_RS14065 0.18 +0.4 2,836,699 - A4249_RS14065 0.18 +0.4 2,836,719 - A4249_RS14065 0.19 +0.4 2,836,739 + A4249_RS14065 0.20 -1.2 2,836,779 + A4249_RS14065 0.23 -2.0 2,836,779 + A4249_RS14065 0.23 -0.6 2,836,780 - A4249_RS14065 0.23 -1.2 2,836,780 - A4249_RS14065 0.23 -0.6 2,836,781 + A4249_RS14065 0.23 -1.2 2,836,782 - A4249_RS14065 0.23 -0.6 2,836,806 - A4249_RS14065 0.24 -0.6 2,837,052 - A4249_RS14065 0.38 -1.2 2,837,145 - A4249_RS14065 0.43 -2.4 2,837,183 + A4249_RS14065 0.45 -1.2 2,837,567 + A4249_RS14065 0.67 +0.4 2,837,583 + A4249_RS14065 0.68 -2.0 2,837,583 + A4249_RS14065 0.68 +0.4 2,837,584 - A4249_RS14065 0.68 -0.0 2,837,586 - A4249_RS14065 0.68 -3.1 2,837,930 + A4249_RS14065 0.88 +0.4 2,837,931 - A4249_RS14065 0.88 -0.6 2,837,931 - A4249_RS14065 0.88 -2.4 2,837,931 - A4249_RS14065 0.88 -1.6 2,838,187 + +0.7 2,838,187 + -0.3 2,838,188 - -2.2 2,838,854 - A4249_RS14070 0.43 +0.6
Or see this region's nucleotide sequence