Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14065

Experiment: D-Glucose (C); 30C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14050 and A4249_RS14055 are separated by 190 nucleotidesA4249_RS14055 and A4249_RS14060 are separated by 66 nucleotidesA4249_RS14060 and A4249_RS14065 are separated by 4 nucleotidesA4249_RS14065 and A4249_RS14070 are separated by 43 nucleotides A4249_RS14050: A4249_RS14050 - DUF885 domain-containing protein, at 2,833,715 to 2,835,550 _RS14050 A4249_RS14055: A4249_RS14055 - entericidin A/B family lipoprotein, at 2,835,741 to 2,835,878 _RS14055 A4249_RS14060: A4249_RS14060 - YidB family protein, at 2,835,945 to 2,836,376 _RS14060 A4249_RS14065: A4249_RS14065 - MFS transporter, at 2,836,381 to 2,838,147 _RS14065 A4249_RS14070: A4249_RS14070 - response regulator, at 2,838,191 to 2,839,729 _RS14070 Position (kb) 2836 2837 2838 2839Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2835.389 kb on - strandat 2835.720 kb on + strandat 2835.721 kb on + strandat 2835.721 kb on + strandat 2835.722 kb on - strandat 2835.722 kb on - strandat 2835.722 kb on - strandat 2835.876 kb on + strandat 2835.876 kb on + strandat 2835.876 kb on + strandat 2835.876 kb on + strandat 2835.876 kb on + strandat 2835.876 kb on + strandat 2835.876 kb on + strandat 2835.877 kb on - strandat 2835.877 kb on - strandat 2835.877 kb on - strandat 2835.877 kb on - strandat 2835.877 kb on - strandat 2835.877 kb on - strandat 2836.151 kb on + strand, within A4249_RS14060at 2836.151 kb on + strand, within A4249_RS14060at 2836.151 kb on + strand, within A4249_RS14060at 2836.151 kb on + strand, within A4249_RS14060at 2836.517 kb on + strandat 2836.518 kb on - strandat 2836.518 kb on - strandat 2836.535 kb on + strandat 2836.698 kb on + strand, within A4249_RS14065at 2836.699 kb on - strand, within A4249_RS14065at 2836.719 kb on - strand, within A4249_RS14065at 2836.739 kb on + strand, within A4249_RS14065at 2836.779 kb on + strand, within A4249_RS14065at 2836.779 kb on + strand, within A4249_RS14065at 2836.780 kb on - strand, within A4249_RS14065at 2836.780 kb on - strand, within A4249_RS14065at 2836.781 kb on + strand, within A4249_RS14065at 2836.782 kb on - strand, within A4249_RS14065at 2836.806 kb on - strand, within A4249_RS14065at 2837.052 kb on - strand, within A4249_RS14065at 2837.145 kb on - strand, within A4249_RS14065at 2837.183 kb on + strand, within A4249_RS14065at 2837.567 kb on + strand, within A4249_RS14065at 2837.583 kb on + strand, within A4249_RS14065at 2837.583 kb on + strand, within A4249_RS14065at 2837.584 kb on - strand, within A4249_RS14065at 2837.586 kb on - strand, within A4249_RS14065at 2837.930 kb on + strand, within A4249_RS14065at 2837.931 kb on - strand, within A4249_RS14065at 2837.931 kb on - strand, within A4249_RS14065at 2837.931 kb on - strand, within A4249_RS14065at 2838.187 kb on + strandat 2838.187 kb on + strandat 2838.188 kb on - strandat 2838.854 kb on - strand, within A4249_RS14070

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C); 30C
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2,835,389 - -0.5
2,835,720 + -0.2
2,835,721 + +0.8
2,835,721 + +0.2
2,835,722 - +0.4
2,835,722 - +0.6
2,835,722 - +0.4
2,835,876 + -0.5
2,835,876 + +1.2
2,835,876 + +1.7
2,835,876 + -0.5
2,835,876 + -0.6
2,835,876 + -0.5
2,835,876 + +2.1
2,835,877 - +0.7
2,835,877 - -0.6
2,835,877 - +0.7
2,835,877 - -1.4
2,835,877 - +1.2
2,835,877 - +0.1
2,836,151 + A4249_RS14060 0.48 +0.2
2,836,151 + A4249_RS14060 0.48 -0.7
2,836,151 + A4249_RS14060 0.48 +0.2
2,836,151 + A4249_RS14060 0.48 +0.9
2,836,517 + -1.2
2,836,518 - -2.0
2,836,518 - -1.6
2,836,535 + -2.2
2,836,698 + A4249_RS14065 0.18 +0.4
2,836,699 - A4249_RS14065 0.18 +0.4
2,836,719 - A4249_RS14065 0.19 +0.4
2,836,739 + A4249_RS14065 0.20 -1.2
2,836,779 + A4249_RS14065 0.23 -2.0
2,836,779 + A4249_RS14065 0.23 -0.6
2,836,780 - A4249_RS14065 0.23 -1.2
2,836,780 - A4249_RS14065 0.23 -0.6
2,836,781 + A4249_RS14065 0.23 -1.2
2,836,782 - A4249_RS14065 0.23 -0.6
2,836,806 - A4249_RS14065 0.24 -0.6
2,837,052 - A4249_RS14065 0.38 -1.2
2,837,145 - A4249_RS14065 0.43 -2.4
2,837,183 + A4249_RS14065 0.45 -1.2
2,837,567 + A4249_RS14065 0.67 +0.4
2,837,583 + A4249_RS14065 0.68 -2.0
2,837,583 + A4249_RS14065 0.68 +0.4
2,837,584 - A4249_RS14065 0.68 -0.0
2,837,586 - A4249_RS14065 0.68 -3.1
2,837,930 + A4249_RS14065 0.88 +0.4
2,837,931 - A4249_RS14065 0.88 -0.6
2,837,931 - A4249_RS14065 0.88 -2.4
2,837,931 - A4249_RS14065 0.88 -1.6
2,838,187 + +0.7
2,838,187 + -0.3
2,838,188 - -2.2
2,838,854 - A4249_RS14070 0.43 +0.6

Or see this region's nucleotide sequence