Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS13790

Experiment: D-Glucose (C); 30C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS13780 and A4249_RS13785 are separated by 217 nucleotidesA4249_RS13785 and A4249_RS13790 are separated by 47 nucleotidesA4249_RS13790 and A4249_RS13795 are separated by 4 nucleotides A4249_RS13780: A4249_RS13780 - exodeoxyribonuclease III, at 2,783,233 to 2,784,030 _RS13780 A4249_RS13785: A4249_RS13785 - hypothetical protein, at 2,784,248 to 2,784,751 _RS13785 A4249_RS13790: A4249_RS13790 - Gfo/Idh/MocA family oxidoreductase, at 2,784,799 to 2,785,731 _RS13790 A4249_RS13795: A4249_RS13795 - DegT/DnrJ/EryC1/StrS aminotransferase family protein, at 2,785,736 to 2,786,899 _RS13795 Position (kb) 2784 2785 2786Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 2784.040 kb on + strandat 2784.040 kb on + strandat 2784.040 kb on + strandat 2784.041 kb on - strandat 2784.057 kb on - strandat 2784.124 kb on + strandat 2784.124 kb on + strandat 2784.124 kb on + strandat 2784.124 kb on + strandat 2784.124 kb on + strandat 2784.124 kb on + strandat 2784.124 kb on + strandat 2784.125 kb on - strandat 2784.125 kb on - strandat 2784.137 kb on + strandat 2784.137 kb on + strandat 2784.137 kb on + strandat 2784.137 kb on + strandat 2784.137 kb on + strandat 2784.185 kb on - strandat 2784.185 kb on - strandat 2784.227 kb on - strandat 2784.238 kb on + strandat 2784.238 kb on + strandat 2784.303 kb on + strand, within A4249_RS13785at 2784.303 kb on + strand, within A4249_RS13785at 2784.303 kb on + strand, within A4249_RS13785at 2784.303 kb on + strand, within A4249_RS13785at 2784.303 kb on + strand, within A4249_RS13785at 2784.304 kb on - strand, within A4249_RS13785at 2784.315 kb on - strand, within A4249_RS13785at 2784.471 kb on + strand, within A4249_RS13785at 2784.471 kb on + strand, within A4249_RS13785at 2784.471 kb on + strand, within A4249_RS13785at 2784.471 kb on + strand, within A4249_RS13785at 2784.471 kb on + strand, within A4249_RS13785at 2784.471 kb on + strand, within A4249_RS13785at 2784.471 kb on + strand, within A4249_RS13785at 2784.471 kb on + strand, within A4249_RS13785at 2784.471 kb on + strand, within A4249_RS13785at 2784.471 kb on + strand, within A4249_RS13785at 2784.471 kb on + strand, within A4249_RS13785at 2784.471 kb on + strand, within A4249_RS13785at 2784.471 kb on + strand, within A4249_RS13785at 2784.471 kb on + strand, within A4249_RS13785at 2784.471 kb on + strand, within A4249_RS13785at 2784.471 kb on + strand, within A4249_RS13785at 2784.472 kb on - strand, within A4249_RS13785at 2784.472 kb on - strand, within A4249_RS13785at 2784.472 kb on - strand, within A4249_RS13785at 2784.472 kb on - strand, within A4249_RS13785at 2784.472 kb on - strand, within A4249_RS13785at 2784.472 kb on - strand, within A4249_RS13785at 2784.472 kb on - strand, within A4249_RS13785at 2784.472 kb on - strand, within A4249_RS13785at 2784.472 kb on - strand, within A4249_RS13785at 2784.472 kb on - strand, within A4249_RS13785at 2784.472 kb on - strand, within A4249_RS13785at 2784.661 kb on + strand, within A4249_RS13785at 2784.661 kb on + strand, within A4249_RS13785at 2784.661 kb on + strand, within A4249_RS13785at 2784.662 kb on - strand, within A4249_RS13785at 2784.662 kb on - strand, within A4249_RS13785at 2784.662 kb on - strand, within A4249_RS13785at 2784.663 kb on + strand, within A4249_RS13785at 2784.663 kb on + strand, within A4249_RS13785at 2784.663 kb on + strand, within A4249_RS13785at 2784.663 kb on + strand, within A4249_RS13785at 2784.663 kb on + strand, within A4249_RS13785at 2784.663 kb on + strand, within A4249_RS13785at 2784.663 kb on + strand, within A4249_RS13785at 2784.663 kb on + strand, within A4249_RS13785at 2784.664 kb on - strand, within A4249_RS13785at 2784.664 kb on - strand, within A4249_RS13785at 2784.664 kb on - strand, within A4249_RS13785at 2784.664 kb on - strand, within A4249_RS13785at 2784.664 kb on - strand, within A4249_RS13785at 2784.664 kb on - strand, within A4249_RS13785at 2784.664 kb on - strand, within A4249_RS13785at 2784.664 kb on - strand, within A4249_RS13785at 2784.664 kb on - strand, within A4249_RS13785at 2784.664 kb on - strand, within A4249_RS13785at 2784.664 kb on - strand, within A4249_RS13785at 2784.664 kb on - strand, within A4249_RS13785at 2784.668 kb on + strand, within A4249_RS13785at 2784.668 kb on + strand, within A4249_RS13785at 2784.668 kb on + strand, within A4249_RS13785at 2784.668 kb on + strand, within A4249_RS13785at 2784.668 kb on + strand, within A4249_RS13785at 2784.668 kb on + strand, within A4249_RS13785at 2784.669 kb on - strand, within A4249_RS13785at 2784.669 kb on - strand, within A4249_RS13785at 2784.669 kb on - strand, within A4249_RS13785at 2784.672 kb on + strand, within A4249_RS13785at 2784.672 kb on + strand, within A4249_RS13785at 2784.672 kb on + strand, within A4249_RS13785at 2784.742 kb on + strandat 2784.742 kb on + strandat 2784.742 kb on + strandat 2784.751 kb on + strandat 2784.751 kb on + strandat 2784.751 kb on + strandat 2784.751 kb on + strandat 2784.751 kb on + strandat 2784.751 kb on + strandat 2784.752 kb on - strandat 2784.752 kb on - strandat 2784.752 kb on - strandat 2784.752 kb on - strandat 2784.752 kb on - strandat 2784.752 kb on - strandat 2785.738 kb on - strandat 2785.746 kb on + strandat 2785.747 kb on - strandat 2785.747 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C); 30C
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2,784,040 + +0.3
2,784,040 + +0.3
2,784,040 + +0.3
2,784,041 - +0.1
2,784,057 - -0.7
2,784,124 + -0.6
2,784,124 + +0.4
2,784,124 + +0.4
2,784,124 + -0.3
2,784,124 + +0.5
2,784,124 + -0.0
2,784,124 + -0.2
2,784,125 - -0.0
2,784,125 - +0.4
2,784,137 + +0.4
2,784,137 + +0.2
2,784,137 + -0.3
2,784,137 + -0.6
2,784,137 + -0.1
2,784,185 - +0.0
2,784,185 - -0.3
2,784,227 - +0.3
2,784,238 + -1.2
2,784,238 + -0.2
2,784,303 + A4249_RS13785 0.11 -0.9
2,784,303 + A4249_RS13785 0.11 -0.0
2,784,303 + A4249_RS13785 0.11 -0.8
2,784,303 + A4249_RS13785 0.11 +2.6
2,784,303 + A4249_RS13785 0.11 -0.4
2,784,304 - A4249_RS13785 0.11 -1.1
2,784,315 - A4249_RS13785 0.13 -1.2
2,784,471 + A4249_RS13785 0.44 +0.1
2,784,471 + A4249_RS13785 0.44 -0.8
2,784,471 + A4249_RS13785 0.44 +0.4
2,784,471 + A4249_RS13785 0.44 +0.7
2,784,471 + A4249_RS13785 0.44 -0.1
2,784,471 + A4249_RS13785 0.44 -0.7
2,784,471 + A4249_RS13785 0.44 -0.6
2,784,471 + A4249_RS13785 0.44 +0.1
2,784,471 + A4249_RS13785 0.44 -0.6
2,784,471 + A4249_RS13785 0.44 -0.1
2,784,471 + A4249_RS13785 0.44 +3.3
2,784,471 + A4249_RS13785 0.44 -0.6
2,784,471 + A4249_RS13785 0.44 +0.0
2,784,471 + A4249_RS13785 0.44 +1.1
2,784,471 + A4249_RS13785 0.44 +1.8
2,784,471 + A4249_RS13785 0.44 +0.2
2,784,472 - A4249_RS13785 0.44 -1.1
2,784,472 - A4249_RS13785 0.44 +1.6
2,784,472 - A4249_RS13785 0.44 +3.9
2,784,472 - A4249_RS13785 0.44 +0.6
2,784,472 - A4249_RS13785 0.44 +1.1
2,784,472 - A4249_RS13785 0.44 +0.2
2,784,472 - A4249_RS13785 0.44 +0.2
2,784,472 - A4249_RS13785 0.44 -0.1
2,784,472 - A4249_RS13785 0.44 +0.7
2,784,472 - A4249_RS13785 0.44 +0.2
2,784,472 - A4249_RS13785 0.44 -0.4
2,784,661 + A4249_RS13785 0.82 +0.4
2,784,661 + A4249_RS13785 0.82 -1.6
2,784,661 + A4249_RS13785 0.82 -1.1
2,784,662 - A4249_RS13785 0.82 -1.2
2,784,662 - A4249_RS13785 0.82 -0.9
2,784,662 - A4249_RS13785 0.82 -0.5
2,784,663 + A4249_RS13785 0.82 -2.9
2,784,663 + A4249_RS13785 0.82 -1.3
2,784,663 + A4249_RS13785 0.82 +1.4
2,784,663 + A4249_RS13785 0.82 +0.7
2,784,663 + A4249_RS13785 0.82 +1.6
2,784,663 + A4249_RS13785 0.82 +0.1
2,784,663 + A4249_RS13785 0.82 +0.4
2,784,663 + A4249_RS13785 0.82 -0.6
2,784,664 - A4249_RS13785 0.83 -1.2
2,784,664 - A4249_RS13785 0.83 -1.0
2,784,664 - A4249_RS13785 0.83 +1.6
2,784,664 - A4249_RS13785 0.83 -0.6
2,784,664 - A4249_RS13785 0.83 -0.4
2,784,664 - A4249_RS13785 0.83 -2.2
2,784,664 - A4249_RS13785 0.83 -0.4
2,784,664 - A4249_RS13785 0.83 -0.0
2,784,664 - A4249_RS13785 0.83 +0.1
2,784,664 - A4249_RS13785 0.83 -0.6
2,784,664 - A4249_RS13785 0.83 -0.7
2,784,664 - A4249_RS13785 0.83 -1.6
2,784,668 + A4249_RS13785 0.83 -0.6
2,784,668 + A4249_RS13785 0.83 +0.6
2,784,668 + A4249_RS13785 0.83 +0.8
2,784,668 + A4249_RS13785 0.83 -1.9
2,784,668 + A4249_RS13785 0.83 +0.4
2,784,668 + A4249_RS13785 0.83 -0.6
2,784,669 - A4249_RS13785 0.84 -0.3
2,784,669 - A4249_RS13785 0.84 +0.2
2,784,669 - A4249_RS13785 0.84 +0.3
2,784,672 + A4249_RS13785 0.84 +0.2
2,784,672 + A4249_RS13785 0.84 +0.8
2,784,672 + A4249_RS13785 0.84 -0.0
2,784,742 + -0.9
2,784,742 + +0.0
2,784,742 + +0.4
2,784,751 + +1.4
2,784,751 + +0.4
2,784,751 + +0.1
2,784,751 + -0.1
2,784,751 + -1.2
2,784,751 + +0.4
2,784,752 - +0.7
2,784,752 - +1.0
2,784,752 - +0.3
2,784,752 - +0.4
2,784,752 - -0.9
2,784,752 - -0.2
2,785,738 - -0.8
2,785,746 + -2.9
2,785,747 - +1.8
2,785,747 - +1.5

Or see this region's nucleotide sequence