Experiment: D-Glucose (C); 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS12545 and A4249_RS12550 are separated by 1 nucleotides A4249_RS12550 and A4249_RS12555 overlap by 4 nucleotides A4249_RS12555 and A4249_RS12560 are separated by 73 nucleotides A4249_RS12560 and A4249_RS12565 are separated by 6 nucleotides
A4249_RS12545: A4249_RS12545 - diaminopimelate decarboxylase, at 2,516,395 to 2,517,669
_RS12545
A4249_RS12550: A4249_RS12550 - hypothetical protein, at 2,517,671 to 2,517,901
_RS12550
A4249_RS12555: A4249_RS12555 - argininosuccinate lyase, at 2,517,898 to 2,519,262
_RS12555
A4249_RS12560: A4249_RS12560 - TlpA disulfide reductase family protein, at 2,519,336 to 2,520,001
_RS12560
A4249_RS12565: A4249_RS12565 - 50S ribosomal protein L7/L12 domain protein, at 2,520,008 to 2,520,319
_RS12565
Position (kb)
2517
2518
2519
2520 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 2516.925 kb on - strand, within A4249_RS12545 at 2517.110 kb on + strand, within A4249_RS12545 at 2517.110 kb on + strand, within A4249_RS12545 at 2517.110 kb on + strand, within A4249_RS12545 at 2517.110 kb on + strand, within A4249_RS12545 at 2517.110 kb on + strand, within A4249_RS12545 at 2517.110 kb on + strand, within A4249_RS12545 at 2517.110 kb on + strand, within A4249_RS12545 at 2517.111 kb on - strand, within A4249_RS12545 at 2517.111 kb on - strand, within A4249_RS12545 at 2517.111 kb on - strand, within A4249_RS12545 at 2517.111 kb on - strand, within A4249_RS12545 at 2517.111 kb on - strand, within A4249_RS12545 at 2517.165 kb on + strand, within A4249_RS12545 at 2517.166 kb on - strand, within A4249_RS12545 at 2517.340 kb on - strand, within A4249_RS12545 at 2517.340 kb on - strand, within A4249_RS12545 at 2517.549 kb on - strand at 2517.549 kb on - strand at 2517.549 kb on - strand at 2517.549 kb on - strand at 2517.575 kb on + strand at 2517.575 kb on + strand at 2517.581 kb on + strand at 2517.581 kb on + strand at 2517.581 kb on + strand at 2517.581 kb on + strand at 2517.581 kb on + strand at 2517.581 kb on + strand at 2517.581 kb on + strand at 2517.581 kb on + strand at 2517.581 kb on + strand at 2517.581 kb on + strand at 2517.581 kb on + strand at 2517.581 kb on + strand at 2517.581 kb on + strand at 2517.581 kb on + strand at 2517.581 kb on + strand at 2517.581 kb on + strand at 2517.581 kb on + strand at 2517.581 kb on + strand at 2517.581 kb on + strand at 2517.581 kb on + strand at 2517.581 kb on + strand at 2517.581 kb on + strand at 2517.581 kb on + strand at 2517.581 kb on + strand at 2517.581 kb on + strand at 2517.582 kb on - strand at 2517.582 kb on - strand at 2517.582 kb on - strand at 2517.582 kb on - strand at 2517.582 kb on - strand at 2517.582 kb on - strand at 2517.582 kb on - strand at 2517.582 kb on - strand at 2517.582 kb on - strand at 2517.582 kb on - strand at 2517.582 kb on - strand at 2517.582 kb on - strand at 2517.582 kb on - strand at 2517.582 kb on - strand at 2517.582 kb on - strand at 2517.582 kb on - strand at 2517.582 kb on - strand at 2517.582 kb on - strand at 2517.582 kb on - strand at 2517.582 kb on - strand at 2517.582 kb on - strand at 2517.582 kb on - strand at 2517.582 kb on - strand at 2517.672 kb on + strand at 2517.673 kb on - strand at 2517.673 kb on - strand at 2517.673 kb on - strand at 2517.959 kb on + strand at 2517.959 kb on + strand at 2517.960 kb on - strand at 2517.960 kb on - strand at 2517.960 kb on - strand at 2517.960 kb on - strand at 2517.960 kb on - strand at 2518.004 kb on + strand at 2518.004 kb on + strand at 2518.004 kb on + strand at 2518.004 kb on + strand at 2518.005 kb on - strand at 2518.005 kb on - strand at 2518.216 kb on - strand, within A4249_RS12555 at 2518.311 kb on + strand, within A4249_RS12555 at 2518.311 kb on + strand, within A4249_RS12555 at 2518.311 kb on + strand, within A4249_RS12555 at 2518.311 kb on + strand, within A4249_RS12555 at 2518.311 kb on + strand, within A4249_RS12555 at 2518.311 kb on + strand, within A4249_RS12555 at 2518.311 kb on + strand, within A4249_RS12555 at 2518.312 kb on - strand, within A4249_RS12555 at 2518.312 kb on - strand, within A4249_RS12555 at 2518.312 kb on - strand, within A4249_RS12555 at 2518.312 kb on - strand, within A4249_RS12555 at 2518.322 kb on + strand, within A4249_RS12555 at 2518.322 kb on + strand, within A4249_RS12555 at 2518.323 kb on - strand, within A4249_RS12555 at 2518.323 kb on - strand, within A4249_RS12555 at 2518.420 kb on - strand, within A4249_RS12555 at 2518.757 kb on + strand, within A4249_RS12555 at 2518.757 kb on + strand, within A4249_RS12555 at 2518.757 kb on + strand, within A4249_RS12555 at 2518.757 kb on + strand, within A4249_RS12555 at 2518.757 kb on + strand, within A4249_RS12555 at 2518.757 kb on + strand, within A4249_RS12555 at 2518.757 kb on + strand, within A4249_RS12555 at 2518.757 kb on + strand, within A4249_RS12555 at 2518.757 kb on + strand, within A4249_RS12555 at 2518.757 kb on + strand, within A4249_RS12555 at 2518.757 kb on + strand, within A4249_RS12555 at 2518.757 kb on + strand, within A4249_RS12555 at 2518.757 kb on + strand, within A4249_RS12555 at 2518.757 kb on + strand, within A4249_RS12555 at 2518.757 kb on + strand, within A4249_RS12555 at 2518.758 kb on - strand, within A4249_RS12555 at 2518.758 kb on - strand, within A4249_RS12555 at 2518.758 kb on - strand, within A4249_RS12555 at 2518.758 kb on - strand, within A4249_RS12555 at 2518.758 kb on - strand, within A4249_RS12555 at 2518.758 kb on - strand, within A4249_RS12555 at 2518.758 kb on - strand, within A4249_RS12555 at 2518.758 kb on - strand, within A4249_RS12555 at 2518.758 kb on - strand, within A4249_RS12555 at 2518.758 kb on - strand, within A4249_RS12555 at 2518.758 kb on - strand, within A4249_RS12555 at 2518.758 kb on - strand, within A4249_RS12555 at 2518.758 kb on - strand, within A4249_RS12555 at 2518.758 kb on - strand, within A4249_RS12555 at 2519.427 kb on + strand, within A4249_RS12560 at 2519.427 kb on + strand, within A4249_RS12560 at 2519.428 kb on - strand, within A4249_RS12560 at 2519.428 kb on - strand, within A4249_RS12560 at 2519.428 kb on - strand, within A4249_RS12560 at 2519.429 kb on + strand, within A4249_RS12560 at 2519.429 kb on + strand, within A4249_RS12560 at 2519.429 kb on + strand, within A4249_RS12560 at 2519.429 kb on + strand, within A4249_RS12560 at 2519.430 kb on - strand, within A4249_RS12560 at 2519.430 kb on - strand, within A4249_RS12560 at 2519.567 kb on + strand, within A4249_RS12560 at 2519.705 kb on + strand, within A4249_RS12560 at 2519.705 kb on + strand, within A4249_RS12560 at 2519.705 kb on + strand, within A4249_RS12560 at 2519.705 kb on + strand, within A4249_RS12560 at 2519.705 kb on + strand, within A4249_RS12560 at 2519.705 kb on + strand, within A4249_RS12560 at 2519.705 kb on + strand, within A4249_RS12560 at 2519.706 kb on - strand, within A4249_RS12560 at 2519.706 kb on - strand, within A4249_RS12560 at 2519.706 kb on - strand, within A4249_RS12560 at 2519.706 kb on - strand, within A4249_RS12560 at 2519.706 kb on - strand, within A4249_RS12560 at 2519.706 kb on - strand, within A4249_RS12560 at 2519.706 kb on - strand, within A4249_RS12560 at 2519.813 kb on + strand, within A4249_RS12560 at 2519.813 kb on + strand, within A4249_RS12560 at 2519.813 kb on + strand, within A4249_RS12560 at 2519.813 kb on + strand, within A4249_RS12560 at 2519.813 kb on + strand, within A4249_RS12560 at 2519.814 kb on - strand, within A4249_RS12560 at 2519.814 kb on - strand, within A4249_RS12560 at 2520.009 kb on + strand at 2520.009 kb on + strand at 2520.009 kb on + strand at 2520.010 kb on - strand at 2520.010 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 30C remove 2,516,925 - A4249_RS12545 0.42 -1.9 2,517,110 + A4249_RS12545 0.56 +0.4 2,517,110 + A4249_RS12545 0.56 -5.8 2,517,110 + A4249_RS12545 0.56 -4.8 2,517,110 + A4249_RS12545 0.56 -2.2 2,517,110 + A4249_RS12545 0.56 -1.2 2,517,110 + A4249_RS12545 0.56 -4.6 2,517,110 + A4249_RS12545 0.56 -2.2 2,517,111 - A4249_RS12545 0.56 -1.8 2,517,111 - A4249_RS12545 0.56 -2.9 2,517,111 - A4249_RS12545 0.56 -2.2 2,517,111 - A4249_RS12545 0.56 -4.2 2,517,111 - A4249_RS12545 0.56 -4.6 2,517,165 + A4249_RS12545 0.60 -4.5 2,517,166 - A4249_RS12545 0.60 -4.1 2,517,340 - A4249_RS12545 0.74 +0.4 2,517,340 - A4249_RS12545 0.74 -3.7 2,517,549 - -4.4 2,517,549 - -4.5 2,517,549 - -2.9 2,517,549 - -4.7 2,517,575 + -3.3 2,517,575 + -3.9 2,517,581 + +0.4 2,517,581 + -3.7 2,517,581 + -3.7 2,517,581 + -1.9 2,517,581 + -3.6 2,517,581 + -3.5 2,517,581 + -2.8 2,517,581 + -2.6 2,517,581 + +0.4 2,517,581 + -3.9 2,517,581 + -0.6 2,517,581 + -2.6 2,517,581 + -3.4 2,517,581 + -2.8 2,517,581 + -1.2 2,517,581 + -0.6 2,517,581 + -2.2 2,517,581 + -2.4 2,517,581 + +0.4 2,517,581 + -1.9 2,517,581 + -1.6 2,517,581 + -1.6 2,517,581 + -3.3 2,517,581 + -1.6 2,517,581 + -4.0 2,517,582 - -2.6 2,517,582 - -3.3 2,517,582 - -1.2 2,517,582 - -4.9 2,517,582 - -3.8 2,517,582 - -2.4 2,517,582 - -2.8 2,517,582 - -4.0 2,517,582 - -2.5 2,517,582 - -2.8 2,517,582 - -3.6 2,517,582 - -2.4 2,517,582 - -1.9 2,517,582 - -4.6 2,517,582 - -2.2 2,517,582 - -3.5 2,517,582 - -1.6 2,517,582 - -3.4 2,517,582 - -2.9 2,517,582 - -3.1 2,517,582 - -2.8 2,517,582 - -3.8 2,517,582 - -1.6 2,517,672 + -1.2 2,517,673 - +0.1 2,517,673 - +0.5 2,517,673 - +0.7 2,517,959 + -2.9 2,517,959 + -2.4 2,517,960 - -4.3 2,517,960 - -2.2 2,517,960 - -4.1 2,517,960 - -5.5 2,517,960 - -1.6 2,518,004 + -2.3 2,518,004 + -3.1 2,518,004 + -5.1 2,518,004 + -0.6 2,518,005 - -0.6 2,518,005 - -2.7 2,518,216 - A4249_RS12555 0.23 -2.7 2,518,311 + A4249_RS12555 0.30 -3.8 2,518,311 + A4249_RS12555 0.30 -2.8 2,518,311 + A4249_RS12555 0.30 -1.2 2,518,311 + A4249_RS12555 0.30 -4.1 2,518,311 + A4249_RS12555 0.30 -3.9 2,518,311 + A4249_RS12555 0.30 -3.1 2,518,311 + A4249_RS12555 0.30 -5.4 2,518,312 - A4249_RS12555 0.30 -0.6 2,518,312 - A4249_RS12555 0.30 -4.3 2,518,312 - A4249_RS12555 0.30 -3.8 2,518,312 - A4249_RS12555 0.30 -2.4 2,518,322 + A4249_RS12555 0.31 -2.9 2,518,322 + A4249_RS12555 0.31 -2.2 2,518,323 - A4249_RS12555 0.31 -3.9 2,518,323 - A4249_RS12555 0.31 -2.8 2,518,420 - A4249_RS12555 0.38 -2.8 2,518,757 + A4249_RS12555 0.63 -4.5 2,518,757 + A4249_RS12555 0.63 -3.8 2,518,757 + A4249_RS12555 0.63 -4.5 2,518,757 + A4249_RS12555 0.63 -4.7 2,518,757 + A4249_RS12555 0.63 -4.8 2,518,757 + A4249_RS12555 0.63 -2.6 2,518,757 + A4249_RS12555 0.63 -3.6 2,518,757 + A4249_RS12555 0.63 -3.3 2,518,757 + A4249_RS12555 0.63 -3.4 2,518,757 + A4249_RS12555 0.63 -3.6 2,518,757 + A4249_RS12555 0.63 -3.2 2,518,757 + A4249_RS12555 0.63 -3.6 2,518,757 + A4249_RS12555 0.63 -4.3 2,518,757 + A4249_RS12555 0.63 -5.3 2,518,757 + A4249_RS12555 0.63 -3.6 2,518,758 - A4249_RS12555 0.63 +0.4 2,518,758 - A4249_RS12555 0.63 -0.6 2,518,758 - A4249_RS12555 0.63 -1.2 2,518,758 - A4249_RS12555 0.63 -2.4 2,518,758 - A4249_RS12555 0.63 -2.6 2,518,758 - A4249_RS12555 0.63 -3.4 2,518,758 - A4249_RS12555 0.63 -3.2 2,518,758 - A4249_RS12555 0.63 -1.6 2,518,758 - A4249_RS12555 0.63 -3.3 2,518,758 - A4249_RS12555 0.63 -4.4 2,518,758 - A4249_RS12555 0.63 -3.9 2,518,758 - A4249_RS12555 0.63 -3.4 2,518,758 - A4249_RS12555 0.63 -3.2 2,518,758 - A4249_RS12555 0.63 -3.1 2,519,427 + A4249_RS12560 0.14 +1.4 2,519,427 + A4249_RS12560 0.14 -0.8 2,519,428 - A4249_RS12560 0.14 +1.3 2,519,428 - A4249_RS12560 0.14 +0.5 2,519,428 - A4249_RS12560 0.14 +0.6 2,519,429 + A4249_RS12560 0.14 +0.3 2,519,429 + A4249_RS12560 0.14 +1.5 2,519,429 + A4249_RS12560 0.14 +1.0 2,519,429 + A4249_RS12560 0.14 +0.9 2,519,430 - A4249_RS12560 0.14 +0.8 2,519,430 - A4249_RS12560 0.14 -0.1 2,519,567 + A4249_RS12560 0.35 +1.3 2,519,705 + A4249_RS12560 0.55 +0.4 2,519,705 + A4249_RS12560 0.55 +0.7 2,519,705 + A4249_RS12560 0.55 -1.8 2,519,705 + A4249_RS12560 0.55 +0.8 2,519,705 + A4249_RS12560 0.55 -0.1 2,519,705 + A4249_RS12560 0.55 +0.8 2,519,705 + A4249_RS12560 0.55 +0.5 2,519,706 - A4249_RS12560 0.56 +0.5 2,519,706 - A4249_RS12560 0.56 +0.5 2,519,706 - A4249_RS12560 0.56 -0.9 2,519,706 - A4249_RS12560 0.56 +1.4 2,519,706 - A4249_RS12560 0.56 -0.3 2,519,706 - A4249_RS12560 0.56 +0.4 2,519,706 - A4249_RS12560 0.56 -1.3 2,519,813 + A4249_RS12560 0.72 +0.5 2,519,813 + A4249_RS12560 0.72 +0.3 2,519,813 + A4249_RS12560 0.72 -0.0 2,519,813 + A4249_RS12560 0.72 -1.6 2,519,813 + A4249_RS12560 0.72 +0.1 2,519,814 - A4249_RS12560 0.72 +0.2 2,519,814 - A4249_RS12560 0.72 -0.5 2,520,009 + +0.1 2,520,009 + -0.6 2,520,009 + +0.2 2,520,010 - -0.3 2,520,010 - -0.5
Or see this region's nucleotide sequence