Experiment: D-Glucose (C); 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS12435 and A4249_RS12440 are separated by 453 nucleotides A4249_RS12440 and A4249_RS12445 overlap by 8 nucleotides
A4249_RS12435: A4249_RS12435 - DUF2975 domain-containing protein, at 2,494,090 to 2,494,695
_RS12435
A4249_RS12440: A4249_RS12440 - RdgB/HAM1 family non-canonical purine NTP pyrophosphatase, at 2,495,149 to 2,495,751
_RS12440
A4249_RS12445: A4249_RS12445 - radical SAM family heme chaperone HemW, at 2,495,744 to 2,496,904
_RS12445
Position (kb)
2495
2496 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2494.161 kb on + strand, within A4249_RS12435 at 2494.162 kb on - strand, within A4249_RS12435 at 2494.162 kb on - strand, within A4249_RS12435 at 2494.162 kb on - strand, within A4249_RS12435 at 2494.162 kb on - strand, within A4249_RS12435 at 2494.162 kb on - strand, within A4249_RS12435 at 2494.563 kb on - strand, within A4249_RS12435 at 2494.563 kb on - strand, within A4249_RS12435 at 2494.563 kb on - strand, within A4249_RS12435 at 2494.563 kb on - strand, within A4249_RS12435 at 2494.563 kb on - strand, within A4249_RS12435 at 2494.563 kb on - strand, within A4249_RS12435 at 2494.588 kb on + strand, within A4249_RS12435 at 2494.588 kb on + strand, within A4249_RS12435 at 2494.588 kb on + strand, within A4249_RS12435 at 2494.588 kb on + strand, within A4249_RS12435 at 2494.588 kb on + strand, within A4249_RS12435 at 2494.588 kb on + strand, within A4249_RS12435 at 2494.588 kb on + strand, within A4249_RS12435 at 2494.588 kb on + strand, within A4249_RS12435 at 2494.589 kb on - strand, within A4249_RS12435 at 2494.589 kb on - strand, within A4249_RS12435 at 2494.768 kb on + strand at 2494.768 kb on + strand at 2494.770 kb on + strand at 2494.770 kb on + strand at 2494.770 kb on + strand at 2494.770 kb on + strand at 2494.770 kb on + strand at 2494.770 kb on + strand at 2494.770 kb on + strand at 2494.771 kb on - strand at 2494.771 kb on - strand at 2494.771 kb on - strand at 2494.771 kb on - strand at 2494.771 kb on - strand at 2494.771 kb on - strand at 2494.771 kb on - strand at 2494.771 kb on - strand at 2494.771 kb on - strand at 2494.771 kb on - strand at 2494.771 kb on - strand at 2494.771 kb on - strand at 2494.771 kb on - strand at 2494.771 kb on - strand at 2494.935 kb on + strand at 2494.935 kb on + strand at 2494.935 kb on + strand at 2494.936 kb on - strand at 2494.936 kb on - strand at 2494.936 kb on - strand at 2494.936 kb on - strand at 2494.936 kb on - strand at 2494.936 kb on - strand at 2494.960 kb on + strand at 2494.960 kb on + strand at 2494.961 kb on - strand at 2494.966 kb on - strand at 2495.058 kb on + strand at 2495.058 kb on + strand at 2495.059 kb on - strand at 2495.063 kb on - strand at 2495.089 kb on + strand at 2495.090 kb on - strand at 2495.122 kb on + strand at 2495.122 kb on + strand at 2495.122 kb on + strand at 2495.122 kb on + strand at 2495.123 kb on - strand at 2495.123 kb on - strand at 2495.123 kb on - strand at 2495.163 kb on + strand at 2495.164 kb on - strand at 2495.164 kb on - strand at 2495.626 kb on + strand, within A4249_RS12440 at 2495.627 kb on - strand, within A4249_RS12440 at 2495.741 kb on + strand at 2495.741 kb on + strand at 2495.783 kb on + strand at 2495.784 kb on - strand at 2495.799 kb on - strand at 2495.819 kb on + strand at 2495.819 kb on + strand at 2495.819 kb on + strand at 2495.820 kb on - strand at 2495.820 kb on - strand at 2495.820 kb on - strand at 2496.251 kb on + strand, within A4249_RS12445 at 2496.251 kb on + strand, within A4249_RS12445 at 2496.251 kb on + strand, within A4249_RS12445 at 2496.251 kb on + strand, within A4249_RS12445 at 2496.251 kb on + strand, within A4249_RS12445 at 2496.251 kb on + strand, within A4249_RS12445 at 2496.251 kb on + strand, within A4249_RS12445 at 2496.252 kb on - strand, within A4249_RS12445 at 2496.252 kb on - strand, within A4249_RS12445 at 2496.252 kb on - strand, within A4249_RS12445 at 2496.252 kb on - strand, within A4249_RS12445 at 2496.252 kb on - strand, within A4249_RS12445 at 2496.335 kb on + strand, within A4249_RS12445 at 2496.348 kb on + strand, within A4249_RS12445 at 2496.348 kb on + strand, within A4249_RS12445 at 2496.348 kb on + strand, within A4249_RS12445 at 2496.349 kb on - strand, within A4249_RS12445 at 2496.349 kb on - strand, within A4249_RS12445 at 2496.349 kb on - strand, within A4249_RS12445 at 2496.349 kb on - strand, within A4249_RS12445 at 2496.473 kb on + strand, within A4249_RS12445 at 2496.473 kb on + strand, within A4249_RS12445 at 2496.473 kb on + strand, within A4249_RS12445 at 2496.473 kb on + strand, within A4249_RS12445 at 2496.474 kb on - strand, within A4249_RS12445 at 2496.474 kb on - strand, within A4249_RS12445 at 2496.474 kb on - strand, within A4249_RS12445 at 2496.474 kb on - strand, within A4249_RS12445 at 2496.548 kb on + strand, within A4249_RS12445 at 2496.548 kb on + strand, within A4249_RS12445 at 2496.548 kb on + strand, within A4249_RS12445 at 2496.548 kb on + strand, within A4249_RS12445 at 2496.548 kb on + strand, within A4249_RS12445 at 2496.635 kb on + strand, within A4249_RS12445 at 2496.636 kb on - strand, within A4249_RS12445 at 2496.636 kb on - strand, within A4249_RS12445 at 2496.636 kb on - strand, within A4249_RS12445 at 2496.636 kb on - strand, within A4249_RS12445 at 2496.659 kb on - strand, within A4249_RS12445 at 2496.659 kb on - strand, within A4249_RS12445
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 30C remove 2,494,161 + A4249_RS12435 0.12 -2.6 2,494,162 - A4249_RS12435 0.12 -0.3 2,494,162 - A4249_RS12435 0.12 -0.3 2,494,162 - A4249_RS12435 0.12 +0.2 2,494,162 - A4249_RS12435 0.12 +0.5 2,494,162 - A4249_RS12435 0.12 +0.4 2,494,563 - A4249_RS12435 0.78 +0.4 2,494,563 - A4249_RS12435 0.78 -1.7 2,494,563 - A4249_RS12435 0.78 -1.2 2,494,563 - A4249_RS12435 0.78 +0.0 2,494,563 - A4249_RS12435 0.78 -2.8 2,494,563 - A4249_RS12435 0.78 -1.6 2,494,588 + A4249_RS12435 0.82 -0.8 2,494,588 + A4249_RS12435 0.82 -0.6 2,494,588 + A4249_RS12435 0.82 -0.4 2,494,588 + A4249_RS12435 0.82 -0.2 2,494,588 + A4249_RS12435 0.82 +1.3 2,494,588 + A4249_RS12435 0.82 -0.0 2,494,588 + A4249_RS12435 0.82 -0.0 2,494,588 + A4249_RS12435 0.82 -0.3 2,494,589 - A4249_RS12435 0.82 -1.0 2,494,589 - A4249_RS12435 0.82 +0.2 2,494,768 + -1.6 2,494,768 + -0.9 2,494,770 + -0.6 2,494,770 + -1.5 2,494,770 + -1.2 2,494,770 + -0.2 2,494,770 + +0.4 2,494,770 + -1.2 2,494,770 + +1.4 2,494,771 - -0.6 2,494,771 - -2.5 2,494,771 - -1.2 2,494,771 - +0.2 2,494,771 - -0.1 2,494,771 - +0.9 2,494,771 - +0.4 2,494,771 - +0.7 2,494,771 - -0.3 2,494,771 - -0.3 2,494,771 - +1.2 2,494,771 - -0.2 2,494,771 - -2.6 2,494,771 - -0.6 2,494,935 + +0.1 2,494,935 + +1.4 2,494,935 + -2.8 2,494,936 - -1.5 2,494,936 - +0.0 2,494,936 - -0.2 2,494,936 - +1.4 2,494,936 - +0.4 2,494,936 - -0.6 2,494,960 + +1.4 2,494,960 + -0.2 2,494,961 - -0.4 2,494,966 - -0.2 2,495,058 + -2.6 2,495,058 + -2.0 2,495,059 - +0.3 2,495,063 - +0.6 2,495,089 + -1.7 2,495,090 - -0.7 2,495,122 + -1.6 2,495,122 + -0.3 2,495,122 + -0.6 2,495,122 + +1.4 2,495,123 - +1.9 2,495,123 - +0.1 2,495,123 - +0.7 2,495,163 + +3.1 2,495,164 - -0.2 2,495,164 - +0.5 2,495,626 + A4249_RS12440 0.79 +0.1 2,495,627 - A4249_RS12440 0.79 -0.7 2,495,741 + -0.8 2,495,741 + -0.7 2,495,783 + -0.1 2,495,784 - +0.4 2,495,799 - -0.7 2,495,819 + -2.6 2,495,819 + -0.2 2,495,819 + -1.9 2,495,820 - -0.4 2,495,820 - +1.4 2,495,820 - -0.4 2,496,251 + A4249_RS12445 0.44 -2.2 2,496,251 + A4249_RS12445 0.44 -0.1 2,496,251 + A4249_RS12445 0.44 -0.6 2,496,251 + A4249_RS12445 0.44 -2.9 2,496,251 + A4249_RS12445 0.44 -0.7 2,496,251 + A4249_RS12445 0.44 -1.4 2,496,251 + A4249_RS12445 0.44 +1.4 2,496,252 - A4249_RS12445 0.44 +0.4 2,496,252 - A4249_RS12445 0.44 -1.5 2,496,252 - A4249_RS12445 0.44 -0.6 2,496,252 - A4249_RS12445 0.44 +2.0 2,496,252 - A4249_RS12445 0.44 +0.7 2,496,335 + A4249_RS12445 0.51 -0.3 2,496,348 + A4249_RS12445 0.52 +0.6 2,496,348 + A4249_RS12445 0.52 -1.2 2,496,348 + A4249_RS12445 0.52 -1.6 2,496,349 - A4249_RS12445 0.52 -0.6 2,496,349 - A4249_RS12445 0.52 +0.4 2,496,349 - A4249_RS12445 0.52 +0.2 2,496,349 - A4249_RS12445 0.52 -1.7 2,496,473 + A4249_RS12445 0.63 +1.0 2,496,473 + A4249_RS12445 0.63 -0.2 2,496,473 + A4249_RS12445 0.63 -1.0 2,496,473 + A4249_RS12445 0.63 -0.6 2,496,474 - A4249_RS12445 0.63 +1.0 2,496,474 - A4249_RS12445 0.63 -0.3 2,496,474 - A4249_RS12445 0.63 -1.3 2,496,474 - A4249_RS12445 0.63 +0.4 2,496,548 + A4249_RS12445 0.69 +1.0 2,496,548 + A4249_RS12445 0.69 -1.9 2,496,548 + A4249_RS12445 0.69 -2.2 2,496,548 + A4249_RS12445 0.69 -0.7 2,496,548 + A4249_RS12445 0.69 -0.9 2,496,635 + A4249_RS12445 0.77 +0.4 2,496,636 - A4249_RS12445 0.77 -0.7 2,496,636 - A4249_RS12445 0.77 +2.4 2,496,636 - A4249_RS12445 0.77 -0.4 2,496,636 - A4249_RS12445 0.77 -1.6 2,496,659 - A4249_RS12445 0.79 +0.4 2,496,659 - A4249_RS12445 0.79 +0.4
Or see this region's nucleotide sequence