Experiment: D-Glucose (C); 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS12335 and A4249_RS12340 overlap by 1 nucleotides A4249_RS12340 and A4249_RS12345 are separated by 9 nucleotides A4249_RS12345 and A4249_RS12350 are separated by 333 nucleotides
A4249_RS12335: A4249_RS12335 - methionyl-tRNA formyltransferase, at 2,475,392 to 2,476,315
_RS12335
A4249_RS12340: A4249_RS12340 - tRNA pseudouridine(38-40) synthase TruA, at 2,476,315 to 2,477,058
_RS12340
A4249_RS12345: A4249_RS12345 - aspartate-semialdehyde dehydrogenase, at 2,477,068 to 2,478,111
_RS12345
A4249_RS12350: A4249_RS12350 - beta-ketoacyl-ACP synthase I, at 2,478,445 to 2,479,662
_RS12350
Position (kb)
2477
2478
2479 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2476.324 kb on + strand at 2476.324 kb on + strand at 2476.324 kb on + strand at 2476.325 kb on - strand at 2476.343 kb on - strand at 2476.357 kb on + strand at 2476.357 kb on + strand at 2476.357 kb on + strand at 2476.358 kb on - strand at 2476.597 kb on + strand, within A4249_RS12340 at 2476.648 kb on + strand, within A4249_RS12340 at 2476.649 kb on - strand, within A4249_RS12340 at 2476.655 kb on - strand, within A4249_RS12340 at 2477.032 kb on + strand at 2477.032 kb on + strand at 2477.033 kb on - strand at 2477.033 kb on - strand at 2477.033 kb on - strand at 2477.050 kb on + strand at 2477.051 kb on - strand at 2477.153 kb on - strand at 2477.153 kb on - strand at 2477.153 kb on - strand at 2477.439 kb on + strand, within A4249_RS12345 at 2477.441 kb on + strand, within A4249_RS12345 at 2477.442 kb on - strand, within A4249_RS12345 at 2477.460 kb on + strand, within A4249_RS12345 at 2477.460 kb on + strand, within A4249_RS12345 at 2477.460 kb on + strand, within A4249_RS12345 at 2477.460 kb on + strand, within A4249_RS12345 at 2477.460 kb on + strand, within A4249_RS12345 at 2477.461 kb on - strand, within A4249_RS12345 at 2477.461 kb on - strand, within A4249_RS12345 at 2477.461 kb on - strand, within A4249_RS12345 at 2477.462 kb on + strand, within A4249_RS12345 at 2477.462 kb on + strand, within A4249_RS12345 at 2477.462 kb on + strand, within A4249_RS12345 at 2477.462 kb on + strand, within A4249_RS12345 at 2477.462 kb on + strand, within A4249_RS12345 at 2477.463 kb on - strand, within A4249_RS12345 at 2477.463 kb on - strand, within A4249_RS12345 at 2477.463 kb on - strand, within A4249_RS12345 at 2477.463 kb on - strand, within A4249_RS12345 at 2477.630 kb on + strand, within A4249_RS12345 at 2477.630 kb on + strand, within A4249_RS12345 at 2477.630 kb on + strand, within A4249_RS12345 at 2477.630 kb on + strand, within A4249_RS12345 at 2477.630 kb on + strand, within A4249_RS12345 at 2477.630 kb on + strand, within A4249_RS12345 at 2477.631 kb on - strand, within A4249_RS12345 at 2477.631 kb on - strand, within A4249_RS12345 at 2477.631 kb on - strand, within A4249_RS12345 at 2477.631 kb on - strand, within A4249_RS12345 at 2477.909 kb on + strand, within A4249_RS12345 at 2478.040 kb on + strand at 2478.040 kb on + strand at 2478.040 kb on + strand at 2478.040 kb on + strand at 2478.040 kb on + strand at 2478.040 kb on + strand at 2478.040 kb on + strand at 2478.041 kb on - strand at 2478.041 kb on - strand at 2478.041 kb on - strand at 2478.041 kb on - strand at 2478.041 kb on - strand at 2478.041 kb on - strand at 2478.041 kb on - strand at 2478.041 kb on - strand at 2478.041 kb on - strand at 2478.041 kb on - strand at 2478.041 kb on - strand at 2478.199 kb on + strand at 2478.199 kb on + strand at 2478.199 kb on + strand at 2478.261 kb on - strand at 2478.312 kb on + strand at 2478.312 kb on + strand at 2478.312 kb on + strand at 2478.313 kb on - strand at 2478.356 kb on + strand at 2478.356 kb on + strand at 2478.357 kb on - strand at 2478.357 kb on - strand at 2478.444 kb on - strand at 2478.444 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 30C remove 2,476,324 + -1.3 2,476,324 + +0.6 2,476,324 + -0.8 2,476,325 - -1.8 2,476,343 - -0.4 2,476,357 + +2.2 2,476,357 + +0.8 2,476,357 + -0.2 2,476,358 - -1.9 2,476,597 + A4249_RS12340 0.38 -0.0 2,476,648 + A4249_RS12340 0.45 -0.7 2,476,649 - A4249_RS12340 0.45 -1.5 2,476,655 - A4249_RS12340 0.46 -1.2 2,477,032 + -0.8 2,477,032 + -2.8 2,477,033 - -0.4 2,477,033 - -1.6 2,477,033 - -1.2 2,477,050 + +1.6 2,477,051 - -1.2 2,477,153 - -0.2 2,477,153 - -0.9 2,477,153 - -1.9 2,477,439 + A4249_RS12345 0.36 +0.4 2,477,441 + A4249_RS12345 0.36 -2.8 2,477,442 - A4249_RS12345 0.36 +0.4 2,477,460 + A4249_RS12345 0.38 -0.6 2,477,460 + A4249_RS12345 0.38 -1.9 2,477,460 + A4249_RS12345 0.38 +0.4 2,477,460 + A4249_RS12345 0.38 -0.1 2,477,460 + A4249_RS12345 0.38 -0.9 2,477,461 - A4249_RS12345 0.38 +0.5 2,477,461 - A4249_RS12345 0.38 -0.6 2,477,461 - A4249_RS12345 0.38 -0.1 2,477,462 + A4249_RS12345 0.38 -0.6 2,477,462 + A4249_RS12345 0.38 -0.2 2,477,462 + A4249_RS12345 0.38 -0.0 2,477,462 + A4249_RS12345 0.38 -0.2 2,477,462 + A4249_RS12345 0.38 -0.0 2,477,463 - A4249_RS12345 0.38 -1.6 2,477,463 - A4249_RS12345 0.38 -0.5 2,477,463 - A4249_RS12345 0.38 +0.4 2,477,463 - A4249_RS12345 0.38 -2.2 2,477,630 + A4249_RS12345 0.54 -0.6 2,477,630 + A4249_RS12345 0.54 +0.2 2,477,630 + A4249_RS12345 0.54 +0.3 2,477,630 + A4249_RS12345 0.54 -1.0 2,477,630 + A4249_RS12345 0.54 -1.3 2,477,630 + A4249_RS12345 0.54 +2.4 2,477,631 - A4249_RS12345 0.54 +2.1 2,477,631 - A4249_RS12345 0.54 -2.2 2,477,631 - A4249_RS12345 0.54 +0.0 2,477,631 - A4249_RS12345 0.54 +0.4 2,477,909 + A4249_RS12345 0.81 +1.2 2,478,040 + -2.9 2,478,040 + -0.0 2,478,040 + +0.8 2,478,040 + -0.4 2,478,040 + -0.6 2,478,040 + -0.4 2,478,040 + -2.6 2,478,041 - +1.2 2,478,041 - -2.6 2,478,041 - -0.7 2,478,041 - +0.2 2,478,041 - -1.1 2,478,041 - +0.9 2,478,041 - +1.1 2,478,041 - -0.8 2,478,041 - -0.4 2,478,041 - -0.3 2,478,041 - -1.2 2,478,199 + -1.7 2,478,199 + +1.4 2,478,199 + -0.2 2,478,261 - -0.6 2,478,312 + +0.4 2,478,312 + -1.5 2,478,312 + -0.6 2,478,313 - -1.2 2,478,356 + +0.4 2,478,356 + +1.0 2,478,357 - +1.0 2,478,357 - +0.0 2,478,444 - +0.7 2,478,444 - +0.4
Or see this region's nucleotide sequence