Experiment: D-Glucose (C); 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS12305 and A4249_RS12310 are separated by 30 nucleotides A4249_RS12310 and A4249_RS12315 are separated by 4 nucleotides A4249_RS12315 and A4249_RS12320 are separated by 32 nucleotides
A4249_RS12305: A4249_RS12305 - glycosyltransferase family 1 protein, at 2,470,959 to 2,472,242
_RS12305
A4249_RS12310: A4249_RS12310 - polysaccharide biosynthesis/export family protein, at 2,472,273 to 2,473,445
_RS12310
A4249_RS12315: A4249_RS12315 - hypothetical protein, at 2,473,450 to 2,474,028
_RS12315
A4249_RS12320: A4249_RS12320 - acyl-CoA thioesterase, at 2,474,061 to 2,474,462
_RS12320
Position (kb)
2472
2473
2474 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2471.367 kb on + strand, within A4249_RS12305 at 2471.367 kb on + strand, within A4249_RS12305 at 2471.368 kb on - strand, within A4249_RS12305 at 2471.571 kb on + strand, within A4249_RS12305 at 2471.572 kb on - strand, within A4249_RS12305 at 2471.572 kb on - strand, within A4249_RS12305 at 2471.697 kb on + strand, within A4249_RS12305 at 2471.698 kb on - strand, within A4249_RS12305 at 2471.698 kb on - strand, within A4249_RS12305 at 2471.698 kb on - strand, within A4249_RS12305 at 2471.755 kb on + strand, within A4249_RS12305 at 2471.756 kb on - strand, within A4249_RS12305 at 2471.945 kb on - strand, within A4249_RS12305 at 2472.144 kb on + strand at 2472.240 kb on + strand at 2472.240 kb on + strand at 2472.240 kb on + strand at 2472.240 kb on + strand at 2472.240 kb on + strand at 2472.240 kb on + strand at 2472.240 kb on + strand at 2473.407 kb on + strand at 2473.407 kb on + strand at 2473.407 kb on + strand at 2473.408 kb on - strand at 2473.408 kb on - strand at 2473.551 kb on + strand, within A4249_RS12315 at 2473.552 kb on - strand, within A4249_RS12315 at 2473.552 kb on - strand, within A4249_RS12315 at 2473.619 kb on - strand, within A4249_RS12315 at 2473.655 kb on - strand, within A4249_RS12315 at 2473.691 kb on + strand, within A4249_RS12315 at 2473.998 kb on + strand at 2474.027 kb on - strand at 2474.292 kb on + strand, within A4249_RS12320 at 2474.292 kb on + strand, within A4249_RS12320 at 2474.292 kb on + strand, within A4249_RS12320 at 2474.292 kb on + strand, within A4249_RS12320 at 2474.293 kb on - strand, within A4249_RS12320 at 2474.293 kb on - strand, within A4249_RS12320 at 2474.409 kb on + strand, within A4249_RS12320 at 2474.409 kb on + strand, within A4249_RS12320 at 2474.409 kb on + strand, within A4249_RS12320 at 2474.409 kb on + strand, within A4249_RS12320 at 2474.409 kb on + strand, within A4249_RS12320 at 2474.409 kb on + strand, within A4249_RS12320 at 2474.410 kb on - strand, within A4249_RS12320 at 2474.410 kb on - strand, within A4249_RS12320 at 2474.410 kb on - strand, within A4249_RS12320 at 2474.410 kb on - strand, within A4249_RS12320 at 2474.410 kb on - strand, within A4249_RS12320 at 2474.410 kb on - strand, within A4249_RS12320
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 30C remove 2,471,367 + A4249_RS12305 0.32 -1.8 2,471,367 + A4249_RS12305 0.32 +0.7 2,471,368 - A4249_RS12305 0.32 -0.7 2,471,571 + A4249_RS12305 0.48 -0.0 2,471,572 - A4249_RS12305 0.48 -1.2 2,471,572 - A4249_RS12305 0.48 +0.2 2,471,697 + A4249_RS12305 0.57 +0.4 2,471,698 - A4249_RS12305 0.58 +1.0 2,471,698 - A4249_RS12305 0.58 -2.6 2,471,698 - A4249_RS12305 0.58 -1.3 2,471,755 + A4249_RS12305 0.62 +0.4 2,471,756 - A4249_RS12305 0.62 -1.9 2,471,945 - A4249_RS12305 0.77 +0.4 2,472,144 + -1.2 2,472,240 + -1.4 2,472,240 + -0.9 2,472,240 + +0.4 2,472,240 + -0.0 2,472,240 + -1.1 2,472,240 + +2.0 2,472,240 + -0.2 2,473,407 + -0.2 2,473,407 + -0.6 2,473,407 + -2.4 2,473,408 - -0.6 2,473,408 - -0.6 2,473,551 + A4249_RS12315 0.17 -1.1 2,473,552 - A4249_RS12315 0.18 +0.4 2,473,552 - A4249_RS12315 0.18 +0.4 2,473,619 - A4249_RS12315 0.29 -0.9 2,473,655 - A4249_RS12315 0.35 +0.4 2,473,691 + A4249_RS12315 0.42 -0.3 2,473,998 + +0.5 2,474,027 - +2.2 2,474,292 + A4249_RS12320 0.57 -1.0 2,474,292 + A4249_RS12320 0.57 +0.8 2,474,292 + A4249_RS12320 0.57 -0.3 2,474,292 + A4249_RS12320 0.57 -0.8 2,474,293 - A4249_RS12320 0.58 -1.0 2,474,293 - A4249_RS12320 0.58 -0.9 2,474,409 + A4249_RS12320 0.87 +1.0 2,474,409 + A4249_RS12320 0.87 +0.7 2,474,409 + A4249_RS12320 0.87 -2.1 2,474,409 + A4249_RS12320 0.87 +0.0 2,474,409 + A4249_RS12320 0.87 +0.4 2,474,409 + A4249_RS12320 0.87 -0.8 2,474,410 - A4249_RS12320 0.87 -1.7 2,474,410 - A4249_RS12320 0.87 -0.6 2,474,410 - A4249_RS12320 0.87 -0.3 2,474,410 - A4249_RS12320 0.87 -0.4 2,474,410 - A4249_RS12320 0.87 -0.6 2,474,410 - A4249_RS12320 0.87 +1.7
Or see this region's nucleotide sequence