Experiment: D-Glucose (C); 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS11600 and A4249_RS16630 overlap by 1 nucleotides A4249_RS16630 and A4249_RS11605 overlap by 4 nucleotides A4249_RS11605 and A4249_RS11610 are separated by 315 nucleotides A4249_RS11610 and A4249_RS11615 are separated by 179 nucleotides A4249_RS11615 and A4249_RS11625 overlap by 14 nucleotides
A4249_RS11600: A4249_RS11600 - cytochrome d ubiquinol oxidase subunit II, at 2,332,557 to 2,333,558
_RS11600
A4249_RS16630: A4249_RS16630 - DUF2474 family protein, at 2,333,558 to 2,333,686
_RS16630
A4249_RS11605: A4249_RS11605 - isoprenylcysteine carboxylmethyltransferase family protein, at 2,333,683 to 2,334,168
_RS11605
A4249_RS11610: A4249_RS11610 - alginate export family protein, at 2,334,484 to 2,335,026
_RS11610
A4249_RS11615: A4249_RS11615 - TnsA endonuclease N-terminal domain-containing protein, at 2,335,206 to 2,335,847
_RS11615
A4249_RS11625: A4249_RS11625 - Mu transposase C-terminal domain-containing protein, at 2,335,834 to 2,337,405
_RS11625
Position (kb)
2334
2335
2336 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2333.494 kb on + strand at 2333.495 kb on - strand at 2333.495 kb on - strand at 2333.495 kb on - strand at 2333.499 kb on + strand at 2333.499 kb on + strand at 2333.500 kb on - strand at 2333.500 kb on - strand at 2333.500 kb on - strand at 2333.500 kb on - strand at 2333.508 kb on + strand at 2333.509 kb on - strand at 2333.509 kb on - strand at 2333.514 kb on + strand at 2333.515 kb on - strand at 2333.648 kb on + strand, within A4249_RS16630 at 2333.649 kb on - strand, within A4249_RS16630 at 2333.953 kb on + strand, within A4249_RS11605 at 2333.954 kb on - strand, within A4249_RS11605 at 2333.954 kb on - strand, within A4249_RS11605 at 2333.954 kb on - strand, within A4249_RS11605 at 2334.112 kb on + strand, within A4249_RS11605 at 2334.112 kb on + strand, within A4249_RS11605 at 2334.166 kb on + strand at 2334.166 kb on + strand at 2334.167 kb on - strand at 2334.167 kb on - strand at 2334.177 kb on + strand at 2334.178 kb on - strand at 2334.178 kb on - strand at 2334.178 kb on - strand at 2334.178 kb on - strand at 2334.335 kb on + strand at 2334.336 kb on - strand at 2334.336 kb on - strand at 2334.336 kb on - strand at 2334.568 kb on + strand, within A4249_RS11610 at 2334.568 kb on + strand, within A4249_RS11610 at 2334.569 kb on - strand, within A4249_RS11610 at 2334.688 kb on + strand, within A4249_RS11610 at 2334.688 kb on + strand, within A4249_RS11610 at 2334.688 kb on + strand, within A4249_RS11610 at 2334.689 kb on - strand, within A4249_RS11610 at 2334.689 kb on - strand, within A4249_RS11610 at 2334.689 kb on - strand, within A4249_RS11610 at 2334.689 kb on - strand, within A4249_RS11610 at 2334.886 kb on + strand, within A4249_RS11610 at 2334.886 kb on + strand, within A4249_RS11610 at 2334.886 kb on + strand, within A4249_RS11610 at 2334.886 kb on + strand, within A4249_RS11610 at 2334.886 kb on + strand, within A4249_RS11610 at 2334.886 kb on + strand, within A4249_RS11610 at 2334.886 kb on + strand, within A4249_RS11610 at 2334.887 kb on - strand, within A4249_RS11610 at 2334.887 kb on - strand, within A4249_RS11610 at 2334.887 kb on - strand, within A4249_RS11610 at 2334.887 kb on - strand, within A4249_RS11610 at 2334.887 kb on - strand, within A4249_RS11610 at 2334.887 kb on - strand, within A4249_RS11610 at 2334.892 kb on + strand, within A4249_RS11610 at 2334.893 kb on - strand, within A4249_RS11610 at 2334.893 kb on - strand, within A4249_RS11610 at 2335.135 kb on + strand at 2335.135 kb on + strand at 2335.135 kb on + strand at 2335.135 kb on + strand at 2335.135 kb on + strand at 2335.136 kb on - strand at 2335.136 kb on - strand at 2335.148 kb on + strand at 2335.148 kb on + strand at 2335.149 kb on - strand at 2335.149 kb on - strand at 2335.160 kb on + strand at 2335.160 kb on + strand at 2335.161 kb on - strand at 2335.161 kb on - strand at 2335.240 kb on - strand at 2335.332 kb on - strand, within A4249_RS11615 at 2335.332 kb on - strand, within A4249_RS11615 at 2335.332 kb on - strand, within A4249_RS11615 at 2335.352 kb on + strand, within A4249_RS11615 at 2335.352 kb on + strand, within A4249_RS11615 at 2335.353 kb on - strand, within A4249_RS11615 at 2335.353 kb on - strand, within A4249_RS11615 at 2335.353 kb on - strand, within A4249_RS11615 at 2335.353 kb on - strand, within A4249_RS11615 at 2335.353 kb on - strand, within A4249_RS11615 at 2335.356 kb on + strand, within A4249_RS11615 at 2335.356 kb on + strand, within A4249_RS11615 at 2335.356 kb on + strand, within A4249_RS11615 at 2335.356 kb on + strand, within A4249_RS11615 at 2335.356 kb on + strand, within A4249_RS11615 at 2335.356 kb on + strand, within A4249_RS11615 at 2335.356 kb on + strand, within A4249_RS11615 at 2335.356 kb on + strand, within A4249_RS11615 at 2335.356 kb on + strand, within A4249_RS11615 at 2335.356 kb on + strand, within A4249_RS11615 at 2335.356 kb on + strand, within A4249_RS11615 at 2335.356 kb on + strand, within A4249_RS11615 at 2335.357 kb on - strand, within A4249_RS11615 at 2335.357 kb on - strand, within A4249_RS11615 at 2335.357 kb on - strand, within A4249_RS11615 at 2335.357 kb on - strand, within A4249_RS11615 at 2335.357 kb on - strand, within A4249_RS11615 at 2335.357 kb on - strand, within A4249_RS11615 at 2335.357 kb on - strand, within A4249_RS11615 at 2335.357 kb on - strand, within A4249_RS11615 at 2335.357 kb on - strand, within A4249_RS11615 at 2335.357 kb on - strand, within A4249_RS11615 at 2335.357 kb on - strand, within A4249_RS11615 at 2335.357 kb on - strand, within A4249_RS11615 at 2335.359 kb on - strand, within A4249_RS11615 at 2335.359 kb on - strand, within A4249_RS11615 at 2335.359 kb on - strand, within A4249_RS11615 at 2335.450 kb on + strand, within A4249_RS11615 at 2335.450 kb on + strand, within A4249_RS11615 at 2335.450 kb on + strand, within A4249_RS11615 at 2335.450 kb on + strand, within A4249_RS11615 at 2335.451 kb on - strand, within A4249_RS11615 at 2335.451 kb on - strand, within A4249_RS11615 at 2335.451 kb on - strand, within A4249_RS11615 at 2335.482 kb on + strand, within A4249_RS11615 at 2335.482 kb on + strand, within A4249_RS11615 at 2335.483 kb on - strand, within A4249_RS11615 at 2335.500 kb on + strand, within A4249_RS11615 at 2335.606 kb on + strand, within A4249_RS11615 at 2335.606 kb on + strand, within A4249_RS11615 at 2335.606 kb on + strand, within A4249_RS11615 at 2335.606 kb on + strand, within A4249_RS11615 at 2335.606 kb on + strand, within A4249_RS11615 at 2335.606 kb on + strand, within A4249_RS11615 at 2335.606 kb on + strand, within A4249_RS11615 at 2335.606 kb on + strand, within A4249_RS11615 at 2335.607 kb on - strand, within A4249_RS11615 at 2335.667 kb on - strand, within A4249_RS11615 at 2335.731 kb on + strand, within A4249_RS11615 at 2335.731 kb on + strand, within A4249_RS11615 at 2335.731 kb on + strand, within A4249_RS11615 at 2335.731 kb on + strand, within A4249_RS11615 at 2335.731 kb on + strand, within A4249_RS11615 at 2335.731 kb on + strand, within A4249_RS11615 at 2335.732 kb on - strand, within A4249_RS11615 at 2335.732 kb on - strand, within A4249_RS11615 at 2335.734 kb on + strand, within A4249_RS11615 at 2335.734 kb on + strand, within A4249_RS11615 at 2335.734 kb on + strand, within A4249_RS11615 at 2335.734 kb on + strand, within A4249_RS11615 at 2335.734 kb on + strand, within A4249_RS11615 at 2335.734 kb on + strand, within A4249_RS11615 at 2335.734 kb on + strand, within A4249_RS11615 at 2335.734 kb on + strand, within A4249_RS11615 at 2335.734 kb on + strand, within A4249_RS11615 at 2335.734 kb on + strand, within A4249_RS11615 at 2335.734 kb on + strand, within A4249_RS11615 at 2335.735 kb on - strand, within A4249_RS11615 at 2335.735 kb on - strand, within A4249_RS11615 at 2335.735 kb on - strand, within A4249_RS11615 at 2335.735 kb on - strand, within A4249_RS11615 at 2335.735 kb on - strand, within A4249_RS11615 at 2335.735 kb on - strand, within A4249_RS11615 at 2335.735 kb on - strand, within A4249_RS11615 at 2335.735 kb on - strand, within A4249_RS11615 at 2335.735 kb on - strand, within A4249_RS11615 at 2335.735 kb on - strand, within A4249_RS11615 at 2335.735 kb on - strand, within A4249_RS11615 at 2335.790 kb on + strand at 2335.791 kb on - strand at 2335.791 kb on - strand at 2335.791 kb on - strand at 2335.845 kb on + strand at 2335.845 kb on + strand at 2335.845 kb on + strand at 2335.845 kb on + strand at 2335.845 kb on + strand at 2335.845 kb on + strand at 2335.845 kb on + strand at 2335.845 kb on + strand at 2335.845 kb on + strand at 2335.845 kb on + strand at 2335.846 kb on - strand at 2335.846 kb on - strand at 2335.846 kb on - strand at 2335.846 kb on - strand at 2335.846 kb on - strand at 2335.846 kb on - strand at 2335.846 kb on - strand at 2335.846 kb on - strand at 2335.846 kb on - strand at 2335.846 kb on - strand at 2335.846 kb on - strand at 2335.850 kb on + strand at 2335.904 kb on + strand at 2335.921 kb on + strand at 2335.921 kb on + strand at 2335.921 kb on + strand at 2335.921 kb on + strand at 2335.921 kb on + strand at 2335.921 kb on + strand at 2335.921 kb on + strand at 2335.921 kb on + strand at 2335.922 kb on - strand at 2335.922 kb on - strand at 2335.922 kb on - strand at 2335.965 kb on + strand at 2335.966 kb on - strand at 2335.966 kb on - strand at 2335.991 kb on + strand at 2335.991 kb on + strand at 2335.991 kb on + strand at 2335.991 kb on + strand at 2335.991 kb on + strand at 2335.991 kb on + strand at 2336.020 kb on + strand, within A4249_RS11625 at 2336.020 kb on + strand, within A4249_RS11625 at 2336.020 kb on + strand, within A4249_RS11625 at 2336.021 kb on - strand, within A4249_RS11625 at 2336.021 kb on - strand, within A4249_RS11625 at 2336.022 kb on + strand, within A4249_RS11625 at 2336.022 kb on + strand, within A4249_RS11625 at 2336.022 kb on + strand, within A4249_RS11625 at 2336.022 kb on + strand, within A4249_RS11625 at 2336.022 kb on + strand, within A4249_RS11625 at 2336.023 kb on - strand, within A4249_RS11625 at 2336.023 kb on - strand, within A4249_RS11625 at 2336.023 kb on - strand, within A4249_RS11625
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 30C remove 2,333,494 + -0.7 2,333,495 - -0.2 2,333,495 - +0.9 2,333,495 - -0.3 2,333,499 + +0.6 2,333,499 + +1.1 2,333,500 - -1.0 2,333,500 - -0.8 2,333,500 - +0.1 2,333,500 - +0.2 2,333,508 + +0.0 2,333,509 - +0.1 2,333,509 - -0.5 2,333,514 + +0.4 2,333,515 - -1.6 2,333,648 + A4249_RS16630 0.70 +1.9 2,333,649 - A4249_RS16630 0.71 -1.4 2,333,953 + A4249_RS11605 0.56 +0.2 2,333,954 - A4249_RS11605 0.56 -0.8 2,333,954 - A4249_RS11605 0.56 -0.6 2,333,954 - A4249_RS11605 0.56 -0.3 2,334,112 + A4249_RS11605 0.88 +2.2 2,334,112 + A4249_RS11605 0.88 -0.0 2,334,166 + -0.6 2,334,166 + -0.2 2,334,167 - -0.6 2,334,167 - -0.6 2,334,177 + +0.5 2,334,178 - -0.0 2,334,178 - +1.1 2,334,178 - -0.2 2,334,178 - +1.2 2,334,335 + +0.8 2,334,336 - +0.1 2,334,336 - +0.4 2,334,336 - -2.8 2,334,568 + A4249_RS11610 0.15 -0.3 2,334,568 + A4249_RS11610 0.15 -0.6 2,334,569 - A4249_RS11610 0.16 -2.0 2,334,688 + A4249_RS11610 0.38 +0.8 2,334,688 + A4249_RS11610 0.38 +0.0 2,334,688 + A4249_RS11610 0.38 +0.8 2,334,689 - A4249_RS11610 0.38 +0.1 2,334,689 - A4249_RS11610 0.38 -0.1 2,334,689 - A4249_RS11610 0.38 -1.0 2,334,689 - A4249_RS11610 0.38 +2.4 2,334,886 + A4249_RS11610 0.74 -0.0 2,334,886 + A4249_RS11610 0.74 +0.1 2,334,886 + A4249_RS11610 0.74 -0.1 2,334,886 + A4249_RS11610 0.74 +0.4 2,334,886 + A4249_RS11610 0.74 -0.6 2,334,886 + A4249_RS11610 0.74 -2.0 2,334,886 + A4249_RS11610 0.74 -0.5 2,334,887 - A4249_RS11610 0.74 +0.9 2,334,887 - A4249_RS11610 0.74 -0.6 2,334,887 - A4249_RS11610 0.74 -2.2 2,334,887 - A4249_RS11610 0.74 +0.4 2,334,887 - A4249_RS11610 0.74 -0.1 2,334,887 - A4249_RS11610 0.74 -2.5 2,334,892 + A4249_RS11610 0.75 +0.4 2,334,893 - A4249_RS11610 0.75 +0.2 2,334,893 - A4249_RS11610 0.75 -0.2 2,335,135 + -0.3 2,335,135 + -0.6 2,335,135 + +1.4 2,335,135 + -1.6 2,335,135 + -0.8 2,335,136 - -0.3 2,335,136 - +0.1 2,335,148 + -0.1 2,335,148 + +0.8 2,335,149 - -0.7 2,335,149 - -1.1 2,335,160 + +0.4 2,335,160 + -0.3 2,335,161 - +0.6 2,335,161 - -1.6 2,335,240 - +0.0 2,335,332 - A4249_RS11615 0.20 -0.1 2,335,332 - A4249_RS11615 0.20 -1.1 2,335,332 - A4249_RS11615 0.20 +1.0 2,335,352 + A4249_RS11615 0.23 -0.5 2,335,352 + A4249_RS11615 0.23 -0.1 2,335,353 - A4249_RS11615 0.23 -0.3 2,335,353 - A4249_RS11615 0.23 -1.8 2,335,353 - A4249_RS11615 0.23 -1.0 2,335,353 - A4249_RS11615 0.23 +0.4 2,335,353 - A4249_RS11615 0.23 -1.0 2,335,356 + A4249_RS11615 0.23 +0.4 2,335,356 + A4249_RS11615 0.23 -0.4 2,335,356 + A4249_RS11615 0.23 +0.8 2,335,356 + A4249_RS11615 0.23 -1.0 2,335,356 + A4249_RS11615 0.23 +1.7 2,335,356 + A4249_RS11615 0.23 +1.2 2,335,356 + A4249_RS11615 0.23 -0.1 2,335,356 + A4249_RS11615 0.23 -0.5 2,335,356 + A4249_RS11615 0.23 +0.1 2,335,356 + A4249_RS11615 0.23 -0.6 2,335,356 + A4249_RS11615 0.23 +0.0 2,335,356 + A4249_RS11615 0.23 +0.9 2,335,357 - A4249_RS11615 0.24 +0.4 2,335,357 - A4249_RS11615 0.24 -0.2 2,335,357 - A4249_RS11615 0.24 +0.1 2,335,357 - A4249_RS11615 0.24 +0.4 2,335,357 - A4249_RS11615 0.24 +0.4 2,335,357 - A4249_RS11615 0.24 -0.1 2,335,357 - A4249_RS11615 0.24 +0.4 2,335,357 - A4249_RS11615 0.24 +0.4 2,335,357 - A4249_RS11615 0.24 +0.9 2,335,357 - A4249_RS11615 0.24 +0.4 2,335,357 - A4249_RS11615 0.24 -0.6 2,335,357 - A4249_RS11615 0.24 +0.4 2,335,359 - A4249_RS11615 0.24 +0.6 2,335,359 - A4249_RS11615 0.24 +0.8 2,335,359 - A4249_RS11615 0.24 +1.6 2,335,450 + A4249_RS11615 0.38 +0.4 2,335,450 + A4249_RS11615 0.38 +0.1 2,335,450 + A4249_RS11615 0.38 -0.0 2,335,450 + A4249_RS11615 0.38 -0.6 2,335,451 - A4249_RS11615 0.38 -0.2 2,335,451 - A4249_RS11615 0.38 +0.6 2,335,451 - A4249_RS11615 0.38 -0.9 2,335,482 + A4249_RS11615 0.43 -0.0 2,335,482 + A4249_RS11615 0.43 +0.4 2,335,483 - A4249_RS11615 0.43 -3.8 2,335,500 + A4249_RS11615 0.46 +0.4 2,335,606 + A4249_RS11615 0.62 -0.7 2,335,606 + A4249_RS11615 0.62 -1.1 2,335,606 + A4249_RS11615 0.62 -2.6 2,335,606 + A4249_RS11615 0.62 -0.6 2,335,606 + A4249_RS11615 0.62 +0.0 2,335,606 + A4249_RS11615 0.62 -1.2 2,335,606 + A4249_RS11615 0.62 +0.4 2,335,606 + A4249_RS11615 0.62 -1.6 2,335,607 - A4249_RS11615 0.62 +0.4 2,335,667 - A4249_RS11615 0.72 +0.4 2,335,731 + A4249_RS11615 0.82 +1.5 2,335,731 + A4249_RS11615 0.82 -0.5 2,335,731 + A4249_RS11615 0.82 +0.6 2,335,731 + A4249_RS11615 0.82 -2.0 2,335,731 + A4249_RS11615 0.82 -0.1 2,335,731 + A4249_RS11615 0.82 -0.6 2,335,732 - A4249_RS11615 0.82 +0.6 2,335,732 - A4249_RS11615 0.82 -1.8 2,335,734 + A4249_RS11615 0.82 -1.2 2,335,734 + A4249_RS11615 0.82 -1.8 2,335,734 + A4249_RS11615 0.82 +0.4 2,335,734 + A4249_RS11615 0.82 +0.7 2,335,734 + A4249_RS11615 0.82 +0.4 2,335,734 + A4249_RS11615 0.82 +1.8 2,335,734 + A4249_RS11615 0.82 -2.0 2,335,734 + A4249_RS11615 0.82 +0.4 2,335,734 + A4249_RS11615 0.82 +0.8 2,335,734 + A4249_RS11615 0.82 +1.2 2,335,734 + A4249_RS11615 0.82 -0.1 2,335,735 - A4249_RS11615 0.82 +0.7 2,335,735 - A4249_RS11615 0.82 -0.2 2,335,735 - A4249_RS11615 0.82 -0.1 2,335,735 - A4249_RS11615 0.82 +0.4 2,335,735 - A4249_RS11615 0.82 -2.0 2,335,735 - A4249_RS11615 0.82 +1.4 2,335,735 - A4249_RS11615 0.82 -0.5 2,335,735 - A4249_RS11615 0.82 +0.1 2,335,735 - A4249_RS11615 0.82 -0.5 2,335,735 - A4249_RS11615 0.82 -0.1 2,335,735 - A4249_RS11615 0.82 +1.1 2,335,790 + -0.1 2,335,791 - +0.2 2,335,791 - +0.4 2,335,791 - +0.4 2,335,845 + +0.5 2,335,845 + -0.1 2,335,845 + +1.9 2,335,845 + +1.9 2,335,845 + +0.6 2,335,845 + -0.4 2,335,845 + +0.5 2,335,845 + +0.4 2,335,845 + -1.0 2,335,845 + +0.4 2,335,846 - +0.7 2,335,846 - +0.5 2,335,846 - -0.2 2,335,846 - +0.3 2,335,846 - -0.7 2,335,846 - -1.0 2,335,846 - -1.6 2,335,846 - -2.1 2,335,846 - +0.6 2,335,846 - -0.7 2,335,846 - +0.1 2,335,850 + +1.4 2,335,904 + -0.0 2,335,921 + +0.4 2,335,921 + +0.1 2,335,921 + +0.0 2,335,921 + -0.5 2,335,921 + -0.6 2,335,921 + -0.3 2,335,921 + +0.4 2,335,921 + +2.2 2,335,922 - +2.7 2,335,922 - +0.4 2,335,922 - -1.6 2,335,965 + +1.4 2,335,966 - -0.4 2,335,966 - -2.0 2,335,991 + -0.3 2,335,991 + +0.8 2,335,991 + -0.5 2,335,991 + +0.1 2,335,991 + -0.2 2,335,991 + -2.3 2,336,020 + A4249_RS11625 0.12 -1.1 2,336,020 + A4249_RS11625 0.12 +0.7 2,336,020 + A4249_RS11625 0.12 +0.6 2,336,021 - A4249_RS11625 0.12 -3.5 2,336,021 - A4249_RS11625 0.12 -0.1 2,336,022 + A4249_RS11625 0.12 -1.8 2,336,022 + A4249_RS11625 0.12 -2.6 2,336,022 + A4249_RS11625 0.12 +0.0 2,336,022 + A4249_RS11625 0.12 -0.1 2,336,022 + A4249_RS11625 0.12 -0.1 2,336,023 - A4249_RS11625 0.12 -1.2 2,336,023 - A4249_RS11625 0.12 -0.2 2,336,023 - A4249_RS11625 0.12 -0.2
Or see this region's nucleotide sequence