Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS11055

Experiment: D-Glucose (C); 30C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS11050 and A4249_RS11055 are separated by 353 nucleotidesA4249_RS11055 and A4249_RS11060 are separated by 8 nucleotidesA4249_RS11060 and A4249_RS11065 are separated by 52 nucleotides A4249_RS11050: A4249_RS11050 - DUF4167 domain-containing protein, at 2,223,199 to 2,224,218 _RS11050 A4249_RS11055: A4249_RS11055 - NAD-dependent epimerase/dehydratase family protein, at 2,224,572 to 2,225,804 _RS11055 A4249_RS11060: A4249_RS11060 - NAD(P)-dependent oxidoreductase, at 2,225,813 to 2,226,703 _RS11060 A4249_RS11065: A4249_RS11065 - DUF1134 domain-containing protein, at 2,226,756 to 2,227,367 _RS11065 Position (kb) 2224 2225 2226Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2223.764 kb on + strand, within A4249_RS11050at 2224.411 kb on - strandat 2224.474 kb on - strandat 2224.536 kb on + strandat 2224.536 kb on + strandat 2224.855 kb on + strand, within A4249_RS11055at 2224.855 kb on + strand, within A4249_RS11055at 2224.856 kb on - strand, within A4249_RS11055at 2224.856 kb on - strand, within A4249_RS11055at 2224.885 kb on - strand, within A4249_RS11055at 2224.914 kb on + strand, within A4249_RS11055at 2224.914 kb on + strand, within A4249_RS11055at 2224.914 kb on + strand, within A4249_RS11055at 2224.914 kb on + strand, within A4249_RS11055at 2224.914 kb on + strand, within A4249_RS11055at 2224.914 kb on + strand, within A4249_RS11055at 2224.915 kb on - strand, within A4249_RS11055at 2224.915 kb on - strand, within A4249_RS11055at 2224.915 kb on - strand, within A4249_RS11055at 2224.915 kb on - strand, within A4249_RS11055at 2224.915 kb on - strand, within A4249_RS11055at 2224.915 kb on - strand, within A4249_RS11055at 2225.016 kb on + strand, within A4249_RS11055at 2225.016 kb on + strand, within A4249_RS11055at 2225.016 kb on + strand, within A4249_RS11055at 2225.016 kb on + strand, within A4249_RS11055at 2225.016 kb on + strand, within A4249_RS11055at 2225.016 kb on + strand, within A4249_RS11055at 2225.016 kb on + strand, within A4249_RS11055at 2225.017 kb on - strand, within A4249_RS11055at 2225.017 kb on - strand, within A4249_RS11055at 2225.017 kb on - strand, within A4249_RS11055at 2225.017 kb on - strand, within A4249_RS11055at 2225.017 kb on - strand, within A4249_RS11055at 2225.017 kb on - strand, within A4249_RS11055at 2225.017 kb on - strand, within A4249_RS11055at 2225.017 kb on - strand, within A4249_RS11055at 2225.017 kb on - strand, within A4249_RS11055at 2225.023 kb on - strand, within A4249_RS11055at 2225.055 kb on + strand, within A4249_RS11055at 2225.056 kb on - strand, within A4249_RS11055at 2225.133 kb on + strand, within A4249_RS11055at 2225.133 kb on + strand, within A4249_RS11055at 2225.133 kb on + strand, within A4249_RS11055at 2225.133 kb on + strand, within A4249_RS11055at 2225.133 kb on + strand, within A4249_RS11055at 2225.133 kb on + strand, within A4249_RS11055at 2225.133 kb on + strand, within A4249_RS11055at 2225.133 kb on + strand, within A4249_RS11055at 2225.133 kb on + strand, within A4249_RS11055at 2225.133 kb on + strand, within A4249_RS11055at 2225.133 kb on + strand, within A4249_RS11055at 2225.133 kb on + strand, within A4249_RS11055at 2225.133 kb on + strand, within A4249_RS11055at 2225.134 kb on - strand, within A4249_RS11055at 2225.134 kb on - strand, within A4249_RS11055at 2225.134 kb on - strand, within A4249_RS11055at 2225.134 kb on - strand, within A4249_RS11055at 2225.134 kb on - strand, within A4249_RS11055at 2225.134 kb on - strand, within A4249_RS11055at 2225.134 kb on - strand, within A4249_RS11055at 2225.134 kb on - strand, within A4249_RS11055at 2225.175 kb on + strand, within A4249_RS11055at 2225.175 kb on + strand, within A4249_RS11055at 2225.176 kb on - strand, within A4249_RS11055at 2225.176 kb on - strand, within A4249_RS11055at 2225.176 kb on - strand, within A4249_RS11055at 2225.176 kb on - strand, within A4249_RS11055at 2225.283 kb on + strand, within A4249_RS11055at 2225.283 kb on + strand, within A4249_RS11055at 2225.283 kb on + strand, within A4249_RS11055at 2225.283 kb on + strand, within A4249_RS11055at 2225.283 kb on + strand, within A4249_RS11055at 2225.283 kb on + strand, within A4249_RS11055at 2225.283 kb on + strand, within A4249_RS11055at 2225.283 kb on + strand, within A4249_RS11055at 2225.283 kb on + strand, within A4249_RS11055at 2225.283 kb on + strand, within A4249_RS11055at 2225.283 kb on + strand, within A4249_RS11055at 2225.283 kb on + strand, within A4249_RS11055at 2225.284 kb on - strand, within A4249_RS11055at 2225.284 kb on - strand, within A4249_RS11055at 2225.284 kb on - strand, within A4249_RS11055at 2225.284 kb on - strand, within A4249_RS11055at 2225.284 kb on - strand, within A4249_RS11055at 2225.284 kb on - strand, within A4249_RS11055at 2225.296 kb on - strand, within A4249_RS11055at 2225.390 kb on + strand, within A4249_RS11055at 2225.390 kb on + strand, within A4249_RS11055at 2225.391 kb on - strand, within A4249_RS11055at 2225.391 kb on - strand, within A4249_RS11055at 2225.541 kb on - strand, within A4249_RS11055at 2225.541 kb on - strand, within A4249_RS11055at 2225.611 kb on + strand, within A4249_RS11055at 2225.611 kb on + strand, within A4249_RS11055at 2225.611 kb on + strand, within A4249_RS11055at 2225.611 kb on + strand, within A4249_RS11055at 2225.612 kb on - strand, within A4249_RS11055at 2225.612 kb on - strand, within A4249_RS11055at 2225.612 kb on - strand, within A4249_RS11055at 2225.612 kb on - strand, within A4249_RS11055at 2225.612 kb on - strand, within A4249_RS11055at 2225.612 kb on - strand, within A4249_RS11055at 2225.812 kb on - strandat 2225.818 kb on + strandat 2225.862 kb on - strandat 2225.892 kb on + strandat 2225.892 kb on + strandat 2225.893 kb on - strandat 2225.893 kb on - strandat 2226.119 kb on + strand, within A4249_RS11060at 2226.119 kb on + strand, within A4249_RS11060at 2226.119 kb on + strand, within A4249_RS11060at 2226.119 kb on + strand, within A4249_RS11060at 2226.119 kb on + strand, within A4249_RS11060at 2226.119 kb on + strand, within A4249_RS11060at 2226.120 kb on - strand, within A4249_RS11060at 2226.120 kb on - strand, within A4249_RS11060at 2226.120 kb on - strand, within A4249_RS11060at 2226.141 kb on - strand, within A4249_RS11060at 2226.294 kb on - strand, within A4249_RS11060at 2226.294 kb on - strand, within A4249_RS11060at 2226.384 kb on + strand, within A4249_RS11060at 2226.384 kb on + strand, within A4249_RS11060at 2226.384 kb on + strand, within A4249_RS11060at 2226.384 kb on + strand, within A4249_RS11060at 2226.384 kb on + strand, within A4249_RS11060at 2226.384 kb on + strand, within A4249_RS11060at 2226.384 kb on + strand, within A4249_RS11060at 2226.384 kb on + strand, within A4249_RS11060at 2226.384 kb on + strand, within A4249_RS11060at 2226.384 kb on + strand, within A4249_RS11060at 2226.384 kb on + strand, within A4249_RS11060at 2226.385 kb on - strand, within A4249_RS11060at 2226.385 kb on - strand, within A4249_RS11060at 2226.385 kb on - strand, within A4249_RS11060at 2226.385 kb on - strand, within A4249_RS11060at 2226.385 kb on - strand, within A4249_RS11060at 2226.385 kb on - strand, within A4249_RS11060at 2226.385 kb on - strand, within A4249_RS11060at 2226.385 kb on - strand, within A4249_RS11060at 2226.385 kb on - strand, within A4249_RS11060at 2226.444 kb on - strand, within A4249_RS11060at 2226.575 kb on + strand, within A4249_RS11060at 2226.575 kb on + strand, within A4249_RS11060at 2226.575 kb on + strand, within A4249_RS11060at 2226.576 kb on - strand, within A4249_RS11060at 2226.576 kb on - strand, within A4249_RS11060at 2226.576 kb on - strand, within A4249_RS11060at 2226.757 kb on + strandat 2226.758 kb on - strandat 2226.758 kb on - strandat 2226.785 kb on + strandat 2226.785 kb on + strandat 2226.786 kb on - strandat 2226.787 kb on + strandat 2226.787 kb on + strandat 2226.787 kb on + strandat 2226.787 kb on + strandat 2226.787 kb on + strandat 2226.787 kb on + strandat 2226.787 kb on + strandat 2226.787 kb on + strandat 2226.787 kb on + strandat 2226.788 kb on - strandat 2226.788 kb on - strandat 2226.788 kb on - strandat 2226.788 kb on - strandat 2226.788 kb on - strandat 2226.788 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C); 30C
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2,223,764 + A4249_RS11050 0.55 -2.8
2,224,411 - -0.6
2,224,474 - -1.1
2,224,536 + -0.7
2,224,536 + -1.0
2,224,855 + A4249_RS11055 0.23 +0.8
2,224,855 + A4249_RS11055 0.23 +0.5
2,224,856 - A4249_RS11055 0.23 +1.4
2,224,856 - A4249_RS11055 0.23 +1.0
2,224,885 - A4249_RS11055 0.25 +1.5
2,224,914 + A4249_RS11055 0.28 +1.1
2,224,914 + A4249_RS11055 0.28 +0.1
2,224,914 + A4249_RS11055 0.28 +1.3
2,224,914 + A4249_RS11055 0.28 +1.0
2,224,914 + A4249_RS11055 0.28 +1.1
2,224,914 + A4249_RS11055 0.28 +0.3
2,224,915 - A4249_RS11055 0.28 +1.4
2,224,915 - A4249_RS11055 0.28 +0.6
2,224,915 - A4249_RS11055 0.28 +1.6
2,224,915 - A4249_RS11055 0.28 +1.2
2,224,915 - A4249_RS11055 0.28 +1.5
2,224,915 - A4249_RS11055 0.28 +1.0
2,225,016 + A4249_RS11055 0.36 +1.5
2,225,016 + A4249_RS11055 0.36 +1.3
2,225,016 + A4249_RS11055 0.36 +1.1
2,225,016 + A4249_RS11055 0.36 +0.9
2,225,016 + A4249_RS11055 0.36 +0.6
2,225,016 + A4249_RS11055 0.36 +2.1
2,225,016 + A4249_RS11055 0.36 +1.5
2,225,017 - A4249_RS11055 0.36 +1.1
2,225,017 - A4249_RS11055 0.36 +1.3
2,225,017 - A4249_RS11055 0.36 +1.4
2,225,017 - A4249_RS11055 0.36 +1.3
2,225,017 - A4249_RS11055 0.36 +1.3
2,225,017 - A4249_RS11055 0.36 +1.2
2,225,017 - A4249_RS11055 0.36 +1.0
2,225,017 - A4249_RS11055 0.36 +0.9
2,225,017 - A4249_RS11055 0.36 +1.4
2,225,023 - A4249_RS11055 0.37 +0.8
2,225,055 + A4249_RS11055 0.39 +1.3
2,225,056 - A4249_RS11055 0.39 +1.2
2,225,133 + A4249_RS11055 0.45 +0.7
2,225,133 + A4249_RS11055 0.45 +0.9
2,225,133 + A4249_RS11055 0.45 +0.8
2,225,133 + A4249_RS11055 0.45 +1.3
2,225,133 + A4249_RS11055 0.45 +0.9
2,225,133 + A4249_RS11055 0.45 +0.2
2,225,133 + A4249_RS11055 0.45 +1.5
2,225,133 + A4249_RS11055 0.45 +0.1
2,225,133 + A4249_RS11055 0.45 -0.4
2,225,133 + A4249_RS11055 0.45 +1.3
2,225,133 + A4249_RS11055 0.45 +1.4
2,225,133 + A4249_RS11055 0.45 +1.4
2,225,133 + A4249_RS11055 0.45 +0.6
2,225,134 - A4249_RS11055 0.46 +0.4
2,225,134 - A4249_RS11055 0.46 +1.2
2,225,134 - A4249_RS11055 0.46 +0.7
2,225,134 - A4249_RS11055 0.46 +1.3
2,225,134 - A4249_RS11055 0.46 +0.4
2,225,134 - A4249_RS11055 0.46 +0.8
2,225,134 - A4249_RS11055 0.46 +1.0
2,225,134 - A4249_RS11055 0.46 +0.2
2,225,175 + A4249_RS11055 0.49 +0.1
2,225,175 + A4249_RS11055 0.49 +1.7
2,225,176 - A4249_RS11055 0.49 +0.8
2,225,176 - A4249_RS11055 0.49 +2.0
2,225,176 - A4249_RS11055 0.49 +1.0
2,225,176 - A4249_RS11055 0.49 -0.3
2,225,283 + A4249_RS11055 0.58 +1.0
2,225,283 + A4249_RS11055 0.58 +1.3
2,225,283 + A4249_RS11055 0.58 +0.3
2,225,283 + A4249_RS11055 0.58 +1.1
2,225,283 + A4249_RS11055 0.58 +0.6
2,225,283 + A4249_RS11055 0.58 +0.7
2,225,283 + A4249_RS11055 0.58 +0.3
2,225,283 + A4249_RS11055 0.58 +0.3
2,225,283 + A4249_RS11055 0.58 +1.2
2,225,283 + A4249_RS11055 0.58 -0.5
2,225,283 + A4249_RS11055 0.58 -0.5
2,225,283 + A4249_RS11055 0.58 +0.6
2,225,284 - A4249_RS11055 0.58 +1.1
2,225,284 - A4249_RS11055 0.58 +1.6
2,225,284 - A4249_RS11055 0.58 +0.8
2,225,284 - A4249_RS11055 0.58 +0.3
2,225,284 - A4249_RS11055 0.58 +0.9
2,225,284 - A4249_RS11055 0.58 +1.6
2,225,296 - A4249_RS11055 0.59 +0.6
2,225,390 + A4249_RS11055 0.66 +0.6
2,225,390 + A4249_RS11055 0.66 +1.9
2,225,391 - A4249_RS11055 0.66 +0.9
2,225,391 - A4249_RS11055 0.66 +1.0
2,225,541 - A4249_RS11055 0.79 +1.8
2,225,541 - A4249_RS11055 0.79 +2.2
2,225,611 + A4249_RS11055 0.84 +0.3
2,225,611 + A4249_RS11055 0.84 +1.2
2,225,611 + A4249_RS11055 0.84 +1.7
2,225,611 + A4249_RS11055 0.84 +0.9
2,225,612 - A4249_RS11055 0.84 +1.0
2,225,612 - A4249_RS11055 0.84 +1.6
2,225,612 - A4249_RS11055 0.84 +1.1
2,225,612 - A4249_RS11055 0.84 +1.3
2,225,612 - A4249_RS11055 0.84 +1.6
2,225,612 - A4249_RS11055 0.84 +1.0
2,225,812 - +1.2
2,225,818 + +0.5
2,225,862 - +0.6
2,225,892 + -0.3
2,225,892 + -1.5
2,225,893 - +2.3
2,225,893 - -0.4
2,226,119 + A4249_RS11060 0.34 +0.8
2,226,119 + A4249_RS11060 0.34 +0.4
2,226,119 + A4249_RS11060 0.34 +1.2
2,226,119 + A4249_RS11060 0.34 -0.2
2,226,119 + A4249_RS11060 0.34 +1.7
2,226,119 + A4249_RS11060 0.34 +0.1
2,226,120 - A4249_RS11060 0.34 -2.2
2,226,120 - A4249_RS11060 0.34 -1.9
2,226,120 - A4249_RS11060 0.34 +1.1
2,226,141 - A4249_RS11060 0.37 -1.5
2,226,294 - A4249_RS11060 0.54 -0.0
2,226,294 - A4249_RS11060 0.54 +0.3
2,226,384 + A4249_RS11060 0.64 -0.2
2,226,384 + A4249_RS11060 0.64 +0.4
2,226,384 + A4249_RS11060 0.64 +0.8
2,226,384 + A4249_RS11060 0.64 +0.9
2,226,384 + A4249_RS11060 0.64 -0.4
2,226,384 + A4249_RS11060 0.64 -0.6
2,226,384 + A4249_RS11060 0.64 +0.5
2,226,384 + A4249_RS11060 0.64 +0.3
2,226,384 + A4249_RS11060 0.64 +0.3
2,226,384 + A4249_RS11060 0.64 +2.3
2,226,384 + A4249_RS11060 0.64 -0.3
2,226,385 - A4249_RS11060 0.64 -1.8
2,226,385 - A4249_RS11060 0.64 +0.3
2,226,385 - A4249_RS11060 0.64 +0.7
2,226,385 - A4249_RS11060 0.64 -1.7
2,226,385 - A4249_RS11060 0.64 -0.1
2,226,385 - A4249_RS11060 0.64 +0.8
2,226,385 - A4249_RS11060 0.64 -0.2
2,226,385 - A4249_RS11060 0.64 +0.1
2,226,385 - A4249_RS11060 0.64 +0.1
2,226,444 - A4249_RS11060 0.71 +0.1
2,226,575 + A4249_RS11060 0.86 -0.5
2,226,575 + A4249_RS11060 0.86 +0.3
2,226,575 + A4249_RS11060 0.86 -1.0
2,226,576 - A4249_RS11060 0.86 -0.1
2,226,576 - A4249_RS11060 0.86 +0.7
2,226,576 - A4249_RS11060 0.86 +0.8
2,226,757 + -1.3
2,226,758 - +0.7
2,226,758 - -0.7
2,226,785 + -0.4
2,226,785 + +0.1
2,226,786 - +0.3
2,226,787 + -0.7
2,226,787 + +0.3
2,226,787 + -1.0
2,226,787 + +1.7
2,226,787 + +0.3
2,226,787 + -1.7
2,226,787 + +0.0
2,226,787 + +0.3
2,226,787 + -0.3
2,226,788 - +0.6
2,226,788 - -0.7
2,226,788 - +0.4
2,226,788 - -0.2
2,226,788 - -1.1
2,226,788 - -2.0

Or see this region's nucleotide sequence