Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10695

Experiment: D-Glucose (C); 30C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS10685 and A4249_RS10690 are separated by 10 nucleotidesA4249_RS10690 and A4249_RS10695 overlap by 1 nucleotidesA4249_RS10695 and A4249_RS10700 overlap by 4 nucleotides A4249_RS10685: A4249_RS10685 - YerC/YecD family TrpR-related protein, at 2,148,598 to 2,148,888 _RS10685 A4249_RS10690: A4249_RS10690 - ATP phosphoribosyltransferase, at 2,148,899 to 2,149,780 _RS10690 A4249_RS10695: A4249_RS10695 - histidinol dehydrogenase, at 2,149,780 to 2,151,087 _RS10695 A4249_RS10700: A4249_RS10700 - imidazoleglycerol-phosphate dehydratase HisB, at 2,151,084 to 2,152,520 _RS10700 Position (kb) 2149 2150 2151 2152Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 2148.899 kb on - strandat 2148.899 kb on - strandat 2149.022 kb on + strand, within A4249_RS10690at 2149.022 kb on + strand, within A4249_RS10690at 2149.022 kb on + strand, within A4249_RS10690at 2149.229 kb on + strand, within A4249_RS10690at 2149.229 kb on + strand, within A4249_RS10690at 2149.229 kb on + strand, within A4249_RS10690at 2149.230 kb on - strand, within A4249_RS10690at 2149.230 kb on - strand, within A4249_RS10690at 2149.441 kb on + strand, within A4249_RS10690at 2149.441 kb on + strand, within A4249_RS10690at 2149.442 kb on - strand, within A4249_RS10690at 2149.442 kb on - strand, within A4249_RS10690at 2149.565 kb on + strand, within A4249_RS10690at 2149.565 kb on + strand, within A4249_RS10690at 2149.565 kb on + strand, within A4249_RS10690at 2149.565 kb on + strand, within A4249_RS10690at 2149.565 kb on + strand, within A4249_RS10690at 2149.565 kb on + strand, within A4249_RS10690at 2149.565 kb on + strand, within A4249_RS10690at 2149.565 kb on + strand, within A4249_RS10690at 2149.565 kb on + strand, within A4249_RS10690at 2149.565 kb on + strand, within A4249_RS10690at 2149.565 kb on + strand, within A4249_RS10690at 2149.565 kb on + strand, within A4249_RS10690at 2149.565 kb on + strand, within A4249_RS10690at 2149.566 kb on - strand, within A4249_RS10690at 2149.566 kb on - strand, within A4249_RS10690at 2149.566 kb on - strand, within A4249_RS10690at 2149.566 kb on - strand, within A4249_RS10690at 2149.566 kb on - strand, within A4249_RS10690at 2149.566 kb on - strand, within A4249_RS10690at 2149.566 kb on - strand, within A4249_RS10690at 2150.161 kb on + strand, within A4249_RS10695at 2150.161 kb on + strand, within A4249_RS10695at 2150.161 kb on + strand, within A4249_RS10695at 2150.161 kb on + strand, within A4249_RS10695at 2150.161 kb on + strand, within A4249_RS10695at 2150.161 kb on + strand, within A4249_RS10695at 2150.161 kb on + strand, within A4249_RS10695at 2150.161 kb on + strand, within A4249_RS10695at 2150.161 kb on + strand, within A4249_RS10695at 2150.162 kb on - strand, within A4249_RS10695at 2150.162 kb on - strand, within A4249_RS10695at 2150.162 kb on - strand, within A4249_RS10695at 2150.162 kb on - strand, within A4249_RS10695at 2150.162 kb on - strand, within A4249_RS10695at 2150.162 kb on - strand, within A4249_RS10695at 2150.163 kb on + strand, within A4249_RS10695at 2150.163 kb on + strand, within A4249_RS10695at 2150.434 kb on + strand, within A4249_RS10695at 2150.435 kb on - strand, within A4249_RS10695at 2150.635 kb on + strand, within A4249_RS10695at 2150.635 kb on + strand, within A4249_RS10695at 2150.635 kb on + strand, within A4249_RS10695at 2150.636 kb on - strand, within A4249_RS10695at 2150.636 kb on - strand, within A4249_RS10695at 2150.636 kb on - strand, within A4249_RS10695at 2150.636 kb on - strand, within A4249_RS10695at 2150.636 kb on - strand, within A4249_RS10695at 2150.636 kb on - strand, within A4249_RS10695at 2150.636 kb on - strand, within A4249_RS10695at 2150.764 kb on + strand, within A4249_RS10695at 2150.764 kb on + strand, within A4249_RS10695at 2150.764 kb on + strand, within A4249_RS10695at 2150.765 kb on - strand, within A4249_RS10695at 2150.765 kb on - strand, within A4249_RS10695at 2150.765 kb on - strand, within A4249_RS10695at 2150.765 kb on - strand, within A4249_RS10695at 2150.765 kb on - strand, within A4249_RS10695at 2150.878 kb on + strand, within A4249_RS10695at 2150.878 kb on + strand, within A4249_RS10695at 2150.878 kb on + strand, within A4249_RS10695at 2150.879 kb on - strand, within A4249_RS10695at 2151.186 kb on + strandat 2151.186 kb on + strandat 2151.186 kb on + strandat 2151.186 kb on + strandat 2151.187 kb on - strandat 2151.193 kb on + strandat 2151.193 kb on + strandat 2151.193 kb on + strandat 2151.193 kb on + strandat 2151.193 kb on + strandat 2151.194 kb on - strandat 2151.194 kb on - strandat 2151.226 kb on + strandat 2151.226 kb on + strandat 2151.303 kb on + strand, within A4249_RS10700at 2151.303 kb on + strand, within A4249_RS10700at 2151.303 kb on + strand, within A4249_RS10700at 2151.303 kb on + strand, within A4249_RS10700at 2151.304 kb on - strand, within A4249_RS10700at 2151.304 kb on - strand, within A4249_RS10700at 2151.304 kb on - strand, within A4249_RS10700at 2151.324 kb on + strand, within A4249_RS10700at 2151.324 kb on + strand, within A4249_RS10700at 2151.325 kb on - strand, within A4249_RS10700at 2151.359 kb on + strand, within A4249_RS10700at 2151.359 kb on + strand, within A4249_RS10700at 2151.360 kb on - strand, within A4249_RS10700at 2151.538 kb on - strand, within A4249_RS10700at 2151.619 kb on - strand, within A4249_RS10700at 2151.619 kb on - strand, within A4249_RS10700at 2151.619 kb on - strand, within A4249_RS10700at 2151.619 kb on - strand, within A4249_RS10700at 2151.831 kb on + strand, within A4249_RS10700at 2151.831 kb on + strand, within A4249_RS10700at 2151.832 kb on - strand, within A4249_RS10700at 2151.832 kb on - strand, within A4249_RS10700

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C); 30C
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2,148,899 - -2.6
2,148,899 - -4.7
2,149,022 + A4249_RS10690 0.14 -2.0
2,149,022 + A4249_RS10690 0.14 -3.6
2,149,022 + A4249_RS10690 0.14 -2.4
2,149,229 + A4249_RS10690 0.37 -3.3
2,149,229 + A4249_RS10690 0.37 -4.0
2,149,229 + A4249_RS10690 0.37 -1.5
2,149,230 - A4249_RS10690 0.38 -5.3
2,149,230 - A4249_RS10690 0.38 -1.6
2,149,441 + A4249_RS10690 0.61 -2.9
2,149,441 + A4249_RS10690 0.61 -3.0
2,149,442 - A4249_RS10690 0.62 -0.2
2,149,442 - A4249_RS10690 0.62 -4.3
2,149,565 + A4249_RS10690 0.76 -3.5
2,149,565 + A4249_RS10690 0.76 -3.2
2,149,565 + A4249_RS10690 0.76 -3.3
2,149,565 + A4249_RS10690 0.76 -5.5
2,149,565 + A4249_RS10690 0.76 -0.6
2,149,565 + A4249_RS10690 0.76 -3.6
2,149,565 + A4249_RS10690 0.76 -2.4
2,149,565 + A4249_RS10690 0.76 -2.6
2,149,565 + A4249_RS10690 0.76 -0.2
2,149,565 + A4249_RS10690 0.76 -3.7
2,149,565 + A4249_RS10690 0.76 -2.0
2,149,565 + A4249_RS10690 0.76 -0.2
2,149,565 + A4249_RS10690 0.76 -0.6
2,149,566 - A4249_RS10690 0.76 -4.1
2,149,566 - A4249_RS10690 0.76 -3.2
2,149,566 - A4249_RS10690 0.76 -3.0
2,149,566 - A4249_RS10690 0.76 -2.8
2,149,566 - A4249_RS10690 0.76 -1.2
2,149,566 - A4249_RS10690 0.76 -4.1
2,149,566 - A4249_RS10690 0.76 -1.2
2,150,161 + A4249_RS10695 0.29 -5.2
2,150,161 + A4249_RS10695 0.29 -3.6
2,150,161 + A4249_RS10695 0.29 -2.4
2,150,161 + A4249_RS10695 0.29 -2.6
2,150,161 + A4249_RS10695 0.29 -2.6
2,150,161 + A4249_RS10695 0.29 -2.0
2,150,161 + A4249_RS10695 0.29 -4.8
2,150,161 + A4249_RS10695 0.29 -4.2
2,150,161 + A4249_RS10695 0.29 -2.4
2,150,162 - A4249_RS10695 0.29 -2.2
2,150,162 - A4249_RS10695 0.29 -4.1
2,150,162 - A4249_RS10695 0.29 -4.5
2,150,162 - A4249_RS10695 0.29 -3.7
2,150,162 - A4249_RS10695 0.29 -2.2
2,150,162 - A4249_RS10695 0.29 -2.4
2,150,163 + A4249_RS10695 0.29 +0.4
2,150,163 + A4249_RS10695 0.29 -4.0
2,150,434 + A4249_RS10695 0.50 -4.8
2,150,435 - A4249_RS10695 0.50 -2.2
2,150,635 + A4249_RS10695 0.65 -2.4
2,150,635 + A4249_RS10695 0.65 -2.2
2,150,635 + A4249_RS10695 0.65 -4.6
2,150,636 - A4249_RS10695 0.65 -4.2
2,150,636 - A4249_RS10695 0.65 -4.4
2,150,636 - A4249_RS10695 0.65 +1.4
2,150,636 - A4249_RS10695 0.65 -2.4
2,150,636 - A4249_RS10695 0.65 -3.3
2,150,636 - A4249_RS10695 0.65 -1.8
2,150,636 - A4249_RS10695 0.65 -3.4
2,150,764 + A4249_RS10695 0.75 -3.8
2,150,764 + A4249_RS10695 0.75 -5.0
2,150,764 + A4249_RS10695 0.75 -4.0
2,150,765 - A4249_RS10695 0.75 -1.2
2,150,765 - A4249_RS10695 0.75 -3.2
2,150,765 - A4249_RS10695 0.75 -1.4
2,150,765 - A4249_RS10695 0.75 -4.3
2,150,765 - A4249_RS10695 0.75 -3.4
2,150,878 + A4249_RS10695 0.84 -2.0
2,150,878 + A4249_RS10695 0.84 +0.4
2,150,878 + A4249_RS10695 0.84 -0.6
2,150,879 - A4249_RS10695 0.84 -4.5
2,151,186 + -3.3
2,151,186 + +0.4
2,151,186 + -3.6
2,151,186 + -0.6
2,151,187 - -3.7
2,151,193 + -2.3
2,151,193 + -2.0
2,151,193 + -2.0
2,151,193 + -4.7
2,151,193 + -2.6
2,151,194 - -2.8
2,151,194 - -2.4
2,151,226 + -2.4
2,151,226 + -5.3
2,151,303 + A4249_RS10700 0.15 -3.4
2,151,303 + A4249_RS10700 0.15 -0.6
2,151,303 + A4249_RS10700 0.15 -3.6
2,151,303 + A4249_RS10700 0.15 -2.2
2,151,304 - A4249_RS10700 0.15 -4.3
2,151,304 - A4249_RS10700 0.15 -3.8
2,151,304 - A4249_RS10700 0.15 -5.3
2,151,324 + A4249_RS10700 0.17 -2.2
2,151,324 + A4249_RS10700 0.17 -1.2
2,151,325 - A4249_RS10700 0.17 -2.0
2,151,359 + A4249_RS10700 0.19 -5.2
2,151,359 + A4249_RS10700 0.19 -3.6
2,151,360 - A4249_RS10700 0.19 -1.6
2,151,538 - A4249_RS10700 0.32 -3.2
2,151,619 - A4249_RS10700 0.37 -2.2
2,151,619 - A4249_RS10700 0.37 -1.6
2,151,619 - A4249_RS10700 0.37 -3.3
2,151,619 - A4249_RS10700 0.37 +0.4
2,151,831 + A4249_RS10700 0.52 +0.4
2,151,831 + A4249_RS10700 0.52 -5.1
2,151,832 - A4249_RS10700 0.52 -3.5
2,151,832 - A4249_RS10700 0.52 -5.4

Or see this region's nucleotide sequence