Experiment: D-Glucose (C); 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10310 and A4249_RS10315 are separated by 195 nucleotides A4249_RS10315 and A4249_RS10320 overlap by 13 nucleotides A4249_RS10320 and A4249_RS10325 are separated by 86 nucleotides
A4249_RS10310: A4249_RS10310 - hypothetical protein, at 2,070,018 to 2,070,212
_RS10310
A4249_RS10315: A4249_RS10315 - response regulator transcription factor, at 2,070,408 to 2,071,124
_RS10315
A4249_RS10320: A4249_RS10320 - HAMP domain-containing sensor histidine kinase, at 2,071,112 to 2,072,425
_RS10320
A4249_RS10325: A4249_RS10325 - serine hydrolase, at 2,072,512 to 2,073,891
_RS10325
Position (kb)
2071
2072
2073 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2070.343 kb on - strand at 2070.717 kb on + strand, within A4249_RS10315 at 2070.717 kb on + strand, within A4249_RS10315 at 2070.717 kb on + strand, within A4249_RS10315 at 2070.717 kb on + strand, within A4249_RS10315 at 2070.717 kb on + strand, within A4249_RS10315 at 2070.717 kb on + strand, within A4249_RS10315 at 2070.717 kb on + strand, within A4249_RS10315 at 2070.717 kb on + strand, within A4249_RS10315 at 2070.717 kb on + strand, within A4249_RS10315 at 2070.717 kb on + strand, within A4249_RS10315 at 2070.718 kb on - strand, within A4249_RS10315 at 2070.718 kb on - strand, within A4249_RS10315 at 2070.718 kb on - strand, within A4249_RS10315 at 2070.718 kb on - strand, within A4249_RS10315 at 2070.718 kb on - strand, within A4249_RS10315 at 2070.718 kb on - strand, within A4249_RS10315 at 2070.718 kb on - strand, within A4249_RS10315 at 2070.718 kb on - strand, within A4249_RS10315 at 2070.718 kb on - strand, within A4249_RS10315 at 2070.719 kb on + strand, within A4249_RS10315 at 2070.719 kb on + strand, within A4249_RS10315 at 2070.719 kb on + strand, within A4249_RS10315 at 2070.719 kb on + strand, within A4249_RS10315 at 2070.720 kb on - strand, within A4249_RS10315 at 2070.720 kb on - strand, within A4249_RS10315 at 2070.720 kb on - strand, within A4249_RS10315 at 2070.720 kb on - strand, within A4249_RS10315 at 2070.720 kb on - strand, within A4249_RS10315 at 2070.720 kb on - strand, within A4249_RS10315 at 2071.089 kb on + strand at 2071.089 kb on + strand at 2071.089 kb on + strand at 2071.089 kb on + strand at 2071.089 kb on + strand at 2071.089 kb on + strand at 2071.090 kb on - strand at 2071.090 kb on - strand at 2071.090 kb on - strand at 2071.090 kb on - strand at 2071.090 kb on - strand at 2071.091 kb on + strand at 2071.091 kb on + strand at 2071.091 kb on + strand at 2071.091 kb on + strand at 2071.091 kb on + strand at 2071.091 kb on + strand at 2071.092 kb on - strand at 2071.092 kb on - strand at 2071.092 kb on - strand at 2071.092 kb on - strand at 2071.092 kb on - strand at 2071.092 kb on - strand at 2071.092 kb on - strand at 2071.092 kb on - strand at 2071.092 kb on - strand at 2071.092 kb on - strand at 2071.111 kb on + strand at 2071.111 kb on + strand at 2071.111 kb on + strand at 2071.111 kb on + strand at 2071.111 kb on + strand at 2071.112 kb on - strand at 2071.122 kb on + strand at 2071.122 kb on + strand at 2071.122 kb on + strand at 2071.123 kb on - strand at 2071.123 kb on - strand at 2071.123 kb on - strand at 2072.270 kb on + strand, within A4249_RS10320 at 2072.270 kb on + strand, within A4249_RS10320 at 2072.271 kb on - strand, within A4249_RS10320 at 2072.271 kb on - strand, within A4249_RS10320 at 2072.271 kb on - strand, within A4249_RS10320 at 2073.079 kb on + strand, within A4249_RS10325 at 2073.079 kb on + strand, within A4249_RS10325 at 2073.079 kb on + strand, within A4249_RS10325 at 2073.079 kb on + strand, within A4249_RS10325 at 2073.079 kb on + strand, within A4249_RS10325 at 2073.079 kb on + strand, within A4249_RS10325 at 2073.080 kb on - strand, within A4249_RS10325 at 2073.080 kb on - strand, within A4249_RS10325 at 2073.080 kb on - strand, within A4249_RS10325 at 2073.080 kb on - strand, within A4249_RS10325 at 2073.124 kb on + strand, within A4249_RS10325 at 2073.125 kb on - strand, within A4249_RS10325 at 2073.125 kb on - strand, within A4249_RS10325 at 2073.125 kb on - strand, within A4249_RS10325 at 2073.182 kb on - strand, within A4249_RS10325 at 2073.182 kb on - strand, within A4249_RS10325 at 2073.224 kb on - strand, within A4249_RS10325 at 2073.224 kb on - strand, within A4249_RS10325 at 2073.259 kb on + strand, within A4249_RS10325 at 2073.259 kb on + strand, within A4249_RS10325 at 2073.259 kb on + strand, within A4249_RS10325 at 2073.259 kb on + strand, within A4249_RS10325 at 2073.260 kb on - strand, within A4249_RS10325 at 2073.260 kb on - strand, within A4249_RS10325 at 2073.260 kb on - strand, within A4249_RS10325 at 2073.298 kb on + strand, within A4249_RS10325 at 2073.298 kb on + strand, within A4249_RS10325 at 2073.298 kb on + strand, within A4249_RS10325 at 2073.298 kb on + strand, within A4249_RS10325 at 2073.298 kb on + strand, within A4249_RS10325 at 2073.299 kb on - strand, within A4249_RS10325 at 2073.299 kb on - strand, within A4249_RS10325 at 2073.299 kb on - strand, within A4249_RS10325 at 2073.299 kb on - strand, within A4249_RS10325 at 2073.404 kb on - strand, within A4249_RS10325
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 30C remove 2,070,343 - +0.5 2,070,717 + A4249_RS10315 0.43 -0.5 2,070,717 + A4249_RS10315 0.43 +0.6 2,070,717 + A4249_RS10315 0.43 -1.3 2,070,717 + A4249_RS10315 0.43 -2.9 2,070,717 + A4249_RS10315 0.43 -0.0 2,070,717 + A4249_RS10315 0.43 -1.0 2,070,717 + A4249_RS10315 0.43 +1.6 2,070,717 + A4249_RS10315 0.43 -0.1 2,070,717 + A4249_RS10315 0.43 -2.9 2,070,717 + A4249_RS10315 0.43 +0.3 2,070,718 - A4249_RS10315 0.43 -0.9 2,070,718 - A4249_RS10315 0.43 -0.4 2,070,718 - A4249_RS10315 0.43 +0.1 2,070,718 - A4249_RS10315 0.43 +1.5 2,070,718 - A4249_RS10315 0.43 -0.0 2,070,718 - A4249_RS10315 0.43 +1.7 2,070,718 - A4249_RS10315 0.43 -0.2 2,070,718 - A4249_RS10315 0.43 -0.2 2,070,718 - A4249_RS10315 0.43 -1.1 2,070,719 + A4249_RS10315 0.43 -0.7 2,070,719 + A4249_RS10315 0.43 -0.0 2,070,719 + A4249_RS10315 0.43 -2.7 2,070,719 + A4249_RS10315 0.43 -0.7 2,070,720 - A4249_RS10315 0.44 +0.4 2,070,720 - A4249_RS10315 0.44 -0.0 2,070,720 - A4249_RS10315 0.44 +1.5 2,070,720 - A4249_RS10315 0.44 +1.9 2,070,720 - A4249_RS10315 0.44 +0.9 2,070,720 - A4249_RS10315 0.44 +1.4 2,071,089 + -1.0 2,071,089 + -0.1 2,071,089 + -0.0 2,071,089 + -2.9 2,071,089 + -0.5 2,071,089 + +0.5 2,071,090 - -0.0 2,071,090 - -0.9 2,071,090 - -0.3 2,071,090 - +1.9 2,071,090 - +0.5 2,071,091 + -0.0 2,071,091 + -0.9 2,071,091 + +0.3 2,071,091 + +2.6 2,071,091 + -1.3 2,071,091 + -0.9 2,071,092 - +2.9 2,071,092 - +0.3 2,071,092 - +0.7 2,071,092 - +0.4 2,071,092 - +0.3 2,071,092 - -0.7 2,071,092 - +1.3 2,071,092 - +0.8 2,071,092 - -1.7 2,071,092 - +0.1 2,071,111 + +1.2 2,071,111 + +2.3 2,071,111 + -1.3 2,071,111 + -0.5 2,071,111 + +0.4 2,071,112 - +0.3 2,071,122 + -0.2 2,071,122 + -2.0 2,071,122 + +0.6 2,071,123 - -0.2 2,071,123 - -0.9 2,071,123 - +0.1 2,072,270 + A4249_RS10320 0.88 -0.9 2,072,270 + A4249_RS10320 0.88 +1.5 2,072,271 - A4249_RS10320 0.88 -0.3 2,072,271 - A4249_RS10320 0.88 +0.5 2,072,271 - A4249_RS10320 0.88 +1.4 2,073,079 + A4249_RS10325 0.41 -0.1 2,073,079 + A4249_RS10325 0.41 +0.9 2,073,079 + A4249_RS10325 0.41 -0.4 2,073,079 + A4249_RS10325 0.41 +0.2 2,073,079 + A4249_RS10325 0.41 +0.5 2,073,079 + A4249_RS10325 0.41 -1.1 2,073,080 - A4249_RS10325 0.41 -2.9 2,073,080 - A4249_RS10325 0.41 -1.4 2,073,080 - A4249_RS10325 0.41 -0.1 2,073,080 - A4249_RS10325 0.41 -0.5 2,073,124 + A4249_RS10325 0.44 +1.9 2,073,125 - A4249_RS10325 0.44 -0.7 2,073,125 - A4249_RS10325 0.44 +0.6 2,073,125 - A4249_RS10325 0.44 -1.6 2,073,182 - A4249_RS10325 0.49 -2.0 2,073,182 - A4249_RS10325 0.49 +1.3 2,073,224 - A4249_RS10325 0.52 +1.9 2,073,224 - A4249_RS10325 0.52 -0.2 2,073,259 + A4249_RS10325 0.54 +0.5 2,073,259 + A4249_RS10325 0.54 +1.3 2,073,259 + A4249_RS10325 0.54 +1.6 2,073,259 + A4249_RS10325 0.54 -1.1 2,073,260 - A4249_RS10325 0.54 -0.3 2,073,260 - A4249_RS10325 0.54 -0.1 2,073,260 - A4249_RS10325 0.54 -0.7 2,073,298 + A4249_RS10325 0.57 +0.1 2,073,298 + A4249_RS10325 0.57 -0.2 2,073,298 + A4249_RS10325 0.57 -0.6 2,073,298 + A4249_RS10325 0.57 -0.3 2,073,298 + A4249_RS10325 0.57 -0.5 2,073,299 - A4249_RS10325 0.57 -1.5 2,073,299 - A4249_RS10325 0.57 +1.3 2,073,299 - A4249_RS10325 0.57 -1.3 2,073,299 - A4249_RS10325 0.57 -1.2 2,073,404 - A4249_RS10325 0.65 -0.2
Or see this region's nucleotide sequence