Experiment: D-Glucose (C); 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10250 and A4249_RS10255 are separated by 43 nucleotides A4249_RS10255 and A4249_RS10260 are separated by 106 nucleotides
A4249_RS10250: A4249_RS10250 - DUF2336 domain-containing protein, at 2,057,875 to 2,059,092
_RS10250
A4249_RS10255: A4249_RS10255 - cysteine synthase A, at 2,059,136 to 2,060,116
_RS10255
A4249_RS10260: A4249_RS10260 - LytTR family DNA-binding domain-containing protein, at 2,060,223 to 2,060,987
_RS10260
Position (kb)
2059
2060
2061 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1
2 at 2058.370 kb on - strand, within A4249_RS10250 at 2058.384 kb on + strand, within A4249_RS10250 at 2058.385 kb on - strand, within A4249_RS10250 at 2058.385 kb on - strand, within A4249_RS10250 at 2058.527 kb on + strand, within A4249_RS10250 at 2058.527 kb on + strand, within A4249_RS10250 at 2058.527 kb on + strand, within A4249_RS10250 at 2058.527 kb on + strand, within A4249_RS10250 at 2058.527 kb on + strand, within A4249_RS10250 at 2058.527 kb on + strand, within A4249_RS10250 at 2058.527 kb on + strand, within A4249_RS10250 at 2058.527 kb on + strand, within A4249_RS10250 at 2058.528 kb on - strand, within A4249_RS10250 at 2058.528 kb on - strand, within A4249_RS10250 at 2058.528 kb on - strand, within A4249_RS10250 at 2058.528 kb on - strand, within A4249_RS10250 at 2058.528 kb on - strand, within A4249_RS10250 at 2058.528 kb on - strand, within A4249_RS10250 at 2059.103 kb on + strand at 2059.103 kb on + strand at 2059.103 kb on + strand at 2059.103 kb on + strand at 2059.103 kb on + strand at 2059.103 kb on + strand at 2059.104 kb on - strand at 2059.104 kb on - strand at 2059.104 kb on - strand at 2059.104 kb on - strand at 2059.104 kb on - strand at 2059.368 kb on + strand, within A4249_RS10255 at 2059.368 kb on + strand, within A4249_RS10255 at 2059.368 kb on + strand, within A4249_RS10255 at 2059.368 kb on + strand, within A4249_RS10255 at 2059.368 kb on + strand, within A4249_RS10255 at 2059.369 kb on - strand, within A4249_RS10255 at 2059.369 kb on - strand, within A4249_RS10255 at 2059.369 kb on - strand, within A4249_RS10255 at 2059.369 kb on - strand, within A4249_RS10255 at 2059.369 kb on - strand, within A4249_RS10255 at 2059.369 kb on - strand, within A4249_RS10255 at 2059.369 kb on - strand, within A4249_RS10255 at 2059.369 kb on - strand, within A4249_RS10255 at 2059.369 kb on - strand, within A4249_RS10255 at 2059.369 kb on - strand, within A4249_RS10255 at 2059.987 kb on + strand, within A4249_RS10255 at 2059.988 kb on - strand, within A4249_RS10255 at 2059.992 kb on + strand, within A4249_RS10255 at 2059.992 kb on + strand, within A4249_RS10255 at 2059.993 kb on - strand, within A4249_RS10255 at 2059.993 kb on - strand, within A4249_RS10255 at 2060.058 kb on + strand at 2060.058 kb on + strand at 2060.058 kb on + strand at 2060.058 kb on + strand at 2060.058 kb on + strand at 2060.058 kb on + strand at 2060.058 kb on + strand at 2060.058 kb on + strand at 2060.059 kb on - strand at 2060.059 kb on - strand at 2060.059 kb on - strand at 2060.059 kb on - strand at 2060.059 kb on - strand at 2060.059 kb on - strand at 2060.059 kb on - strand at 2060.059 kb on - strand at 2060.100 kb on + strand at 2060.100 kb on + strand at 2060.100 kb on + strand at 2060.100 kb on + strand at 2060.100 kb on + strand at 2060.101 kb on - strand at 2060.101 kb on - strand at 2060.101 kb on - strand at 2060.101 kb on - strand at 2060.101 kb on - strand at 2060.153 kb on + strand at 2060.153 kb on + strand at 2060.153 kb on + strand at 2060.153 kb on + strand at 2060.153 kb on + strand at 2060.153 kb on + strand at 2060.153 kb on + strand at 2060.153 kb on + strand at 2060.154 kb on - strand at 2060.154 kb on - strand at 2060.154 kb on - strand at 2060.154 kb on - strand at 2060.224 kb on + strand at 2060.447 kb on + strand, within A4249_RS10260 at 2060.448 kb on - strand, within A4249_RS10260 at 2060.448 kb on - strand, within A4249_RS10260 at 2060.448 kb on - strand, within A4249_RS10260 at 2060.448 kb on - strand, within A4249_RS10260 at 2060.461 kb on + strand, within A4249_RS10260 at 2060.461 kb on + strand, within A4249_RS10260 at 2060.461 kb on + strand, within A4249_RS10260 at 2060.461 kb on + strand, within A4249_RS10260 at 2060.461 kb on + strand, within A4249_RS10260 at 2060.461 kb on + strand, within A4249_RS10260 at 2060.461 kb on + strand, within A4249_RS10260 at 2060.461 kb on + strand, within A4249_RS10260 at 2060.461 kb on + strand, within A4249_RS10260 at 2060.461 kb on + strand, within A4249_RS10260 at 2060.461 kb on + strand, within A4249_RS10260 at 2060.461 kb on + strand, within A4249_RS10260 at 2060.461 kb on + strand, within A4249_RS10260 at 2060.461 kb on + strand, within A4249_RS10260 at 2060.461 kb on + strand, within A4249_RS10260 at 2060.462 kb on - strand, within A4249_RS10260 at 2060.462 kb on - strand, within A4249_RS10260 at 2060.462 kb on - strand, within A4249_RS10260 at 2060.462 kb on - strand, within A4249_RS10260 at 2060.462 kb on - strand, within A4249_RS10260 at 2060.462 kb on - strand, within A4249_RS10260 at 2060.462 kb on - strand, within A4249_RS10260 at 2060.462 kb on - strand, within A4249_RS10260 at 2060.587 kb on + strand, within A4249_RS10260 at 2060.587 kb on + strand, within A4249_RS10260 at 2060.588 kb on - strand, within A4249_RS10260 at 2060.588 kb on - strand, within A4249_RS10260 at 2060.588 kb on - strand, within A4249_RS10260 at 2060.588 kb on - strand, within A4249_RS10260 at 2060.599 kb on + strand, within A4249_RS10260 at 2060.599 kb on + strand, within A4249_RS10260 at 2060.599 kb on + strand, within A4249_RS10260 at 2060.599 kb on + strand, within A4249_RS10260 at 2060.600 kb on - strand, within A4249_RS10260 at 2060.600 kb on - strand, within A4249_RS10260 at 2060.600 kb on - strand, within A4249_RS10260 at 2060.600 kb on - strand, within A4249_RS10260 at 2060.629 kb on + strand, within A4249_RS10260 at 2060.706 kb on - strand, within A4249_RS10260 at 2060.839 kb on + strand, within A4249_RS10260 at 2060.954 kb on + strand at 2060.954 kb on + strand at 2060.954 kb on + strand at 2060.955 kb on - strand at 2060.955 kb on - strand at 2060.955 kb on - strand at 2061.008 kb on + strand at 2061.008 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 30C remove 2,058,370 - A4249_RS10250 0.41 -1.3 2,058,384 + A4249_RS10250 0.42 +1.3 2,058,385 - A4249_RS10250 0.42 +0.4 2,058,385 - A4249_RS10250 0.42 -2.3 2,058,527 + A4249_RS10250 0.54 -0.0 2,058,527 + A4249_RS10250 0.54 +0.1 2,058,527 + A4249_RS10250 0.54 +0.2 2,058,527 + A4249_RS10250 0.54 +0.7 2,058,527 + A4249_RS10250 0.54 -1.7 2,058,527 + A4249_RS10250 0.54 -1.6 2,058,527 + A4249_RS10250 0.54 -0.5 2,058,527 + A4249_RS10250 0.54 -1.9 2,058,528 - A4249_RS10250 0.54 -0.3 2,058,528 - A4249_RS10250 0.54 -0.0 2,058,528 - A4249_RS10250 0.54 +1.1 2,058,528 - A4249_RS10250 0.54 +0.6 2,058,528 - A4249_RS10250 0.54 +0.5 2,058,528 - A4249_RS10250 0.54 +0.8 2,059,103 + -1.3 2,059,103 + -0.1 2,059,103 + +0.5 2,059,103 + -3.2 2,059,103 + +1.9 2,059,103 + +1.1 2,059,104 - +0.3 2,059,104 - -0.9 2,059,104 - -0.7 2,059,104 - -0.4 2,059,104 - -2.0 2,059,368 + A4249_RS10255 0.24 -4.4 2,059,368 + A4249_RS10255 0.24 -3.5 2,059,368 + A4249_RS10255 0.24 -0.7 2,059,368 + A4249_RS10255 0.24 -2.4 2,059,368 + A4249_RS10255 0.24 -4.2 2,059,369 - A4249_RS10255 0.24 -1.8 2,059,369 - A4249_RS10255 0.24 -5.3 2,059,369 - A4249_RS10255 0.24 -4.1 2,059,369 - A4249_RS10255 0.24 -5.2 2,059,369 - A4249_RS10255 0.24 -3.0 2,059,369 - A4249_RS10255 0.24 -3.3 2,059,369 - A4249_RS10255 0.24 -2.8 2,059,369 - A4249_RS10255 0.24 -3.8 2,059,369 - A4249_RS10255 0.24 -3.3 2,059,369 - A4249_RS10255 0.24 -2.9 2,059,987 + A4249_RS10255 0.87 -4.4 2,059,988 - A4249_RS10255 0.87 -5.1 2,059,992 + A4249_RS10255 0.87 -1.7 2,059,992 + A4249_RS10255 0.87 -3.5 2,059,993 - A4249_RS10255 0.87 -4.1 2,059,993 - A4249_RS10255 0.87 -2.2 2,060,058 + -3.2 2,060,058 + -4.0 2,060,058 + -1.5 2,060,058 + -1.8 2,060,058 + -3.1 2,060,058 + -6.4 2,060,058 + -3.5 2,060,058 + -3.2 2,060,059 - -3.3 2,060,059 - -3.8 2,060,059 - -5.2 2,060,059 - -4.8 2,060,059 - -3.9 2,060,059 - -5.1 2,060,059 - -4.3 2,060,059 - -3.2 2,060,100 + -2.3 2,060,100 + -4.0 2,060,100 + -2.3 2,060,100 + -4.2 2,060,100 + -2.0 2,060,101 - -4.1 2,060,101 - -3.3 2,060,101 - -3.3 2,060,101 - -0.7 2,060,101 - -1.9 2,060,153 + -2.9 2,060,153 + -0.7 2,060,153 + -1.2 2,060,153 + -0.8 2,060,153 + +0.3 2,060,153 + -1.0 2,060,153 + -2.3 2,060,153 + +0.0 2,060,154 - -0.7 2,060,154 - -0.0 2,060,154 - +0.8 2,060,154 - +0.8 2,060,224 + +1.1 2,060,447 + A4249_RS10260 0.29 +1.1 2,060,448 - A4249_RS10260 0.29 +1.3 2,060,448 - A4249_RS10260 0.29 -0.7 2,060,448 - A4249_RS10260 0.29 -2.0 2,060,448 - A4249_RS10260 0.29 +0.3 2,060,461 + A4249_RS10260 0.31 -2.2 2,060,461 + A4249_RS10260 0.31 -1.1 2,060,461 + A4249_RS10260 0.31 +0.7 2,060,461 + A4249_RS10260 0.31 -0.4 2,060,461 + A4249_RS10260 0.31 +2.3 2,060,461 + A4249_RS10260 0.31 +0.0 2,060,461 + A4249_RS10260 0.31 +1.1 2,060,461 + A4249_RS10260 0.31 +2.5 2,060,461 + A4249_RS10260 0.31 -0.4 2,060,461 + A4249_RS10260 0.31 -1.4 2,060,461 + A4249_RS10260 0.31 +1.6 2,060,461 + A4249_RS10260 0.31 +1.2 2,060,461 + A4249_RS10260 0.31 -0.8 2,060,461 + A4249_RS10260 0.31 -0.7 2,060,461 + A4249_RS10260 0.31 +1.0 2,060,462 - A4249_RS10260 0.31 -1.8 2,060,462 - A4249_RS10260 0.31 +0.8 2,060,462 - A4249_RS10260 0.31 -0.2 2,060,462 - A4249_RS10260 0.31 +0.5 2,060,462 - A4249_RS10260 0.31 +0.3 2,060,462 - A4249_RS10260 0.31 -2.0 2,060,462 - A4249_RS10260 0.31 -0.1 2,060,462 - A4249_RS10260 0.31 +0.6 2,060,587 + A4249_RS10260 0.48 +1.9 2,060,587 + A4249_RS10260 0.48 +0.8 2,060,588 - A4249_RS10260 0.48 +1.3 2,060,588 - A4249_RS10260 0.48 +0.4 2,060,588 - A4249_RS10260 0.48 +1.6 2,060,588 - A4249_RS10260 0.48 -1.0 2,060,599 + A4249_RS10260 0.49 +0.3 2,060,599 + A4249_RS10260 0.49 +1.9 2,060,599 + A4249_RS10260 0.49 +2.3 2,060,599 + A4249_RS10260 0.49 -0.3 2,060,600 - A4249_RS10260 0.49 -2.9 2,060,600 - A4249_RS10260 0.49 +0.1 2,060,600 - A4249_RS10260 0.49 -0.0 2,060,600 - A4249_RS10260 0.49 -0.7 2,060,629 + A4249_RS10260 0.53 -0.5 2,060,706 - A4249_RS10260 0.63 +0.0 2,060,839 + A4249_RS10260 0.81 -1.4 2,060,954 + -0.5 2,060,954 + -1.0 2,060,954 + +0.5 2,060,955 - +0.1 2,060,955 - +1.2 2,060,955 - +1.2 2,061,008 + +1.0 2,061,008 + -0.3
Or see this region's nucleotide sequence