Experiment: D-Glucose (C); 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10225 and A4249_RS10230 are separated by 44 nucleotides A4249_RS10230 and A4249_RS10235 are separated by 95 nucleotides A4249_RS10235 and A4249_RS10240 overlap by 4 nucleotides
A4249_RS10225: A4249_RS10225 - energy transducer TonB, at 2,052,675 to 2,053,841
_RS10225
A4249_RS10230: A4249_RS10230 - ABC transporter substrate-binding protein, at 2,053,886 to 2,054,926
_RS10230
A4249_RS10235: A4249_RS10235 - hypothetical protein, at 2,055,022 to 2,055,924
_RS10235
A4249_RS10240: A4249_RS10240 - DUF2336 domain-containing protein, at 2,055,921 to 2,057,036
_RS10240
Position (kb)
2053
2054
2055 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2052.971 kb on + strand, within A4249_RS10225 at 2052.971 kb on + strand, within A4249_RS10225 at 2052.971 kb on + strand, within A4249_RS10225 at 2052.972 kb on - strand, within A4249_RS10225 at 2052.972 kb on - strand, within A4249_RS10225 at 2053.128 kb on + strand, within A4249_RS10225 at 2053.128 kb on + strand, within A4249_RS10225 at 2053.129 kb on - strand, within A4249_RS10225 at 2053.129 kb on - strand, within A4249_RS10225 at 2053.249 kb on - strand, within A4249_RS10225 at 2053.257 kb on + strand, within A4249_RS10225 at 2053.258 kb on - strand, within A4249_RS10225 at 2053.258 kb on - strand, within A4249_RS10225 at 2053.370 kb on + strand, within A4249_RS10225 at 2053.370 kb on + strand, within A4249_RS10225 at 2053.371 kb on - strand, within A4249_RS10225 at 2053.371 kb on - strand, within A4249_RS10225 at 2053.371 kb on - strand, within A4249_RS10225 at 2053.458 kb on + strand, within A4249_RS10225 at 2053.458 kb on + strand, within A4249_RS10225 at 2053.458 kb on + strand, within A4249_RS10225 at 2053.459 kb on - strand, within A4249_RS10225 at 2053.459 kb on - strand, within A4249_RS10225 at 2053.576 kb on - strand, within A4249_RS10225 at 2053.660 kb on + strand, within A4249_RS10225 at 2053.660 kb on + strand, within A4249_RS10225 at 2053.660 kb on + strand, within A4249_RS10225 at 2053.660 kb on + strand, within A4249_RS10225 at 2053.661 kb on - strand, within A4249_RS10225 at 2053.661 kb on - strand, within A4249_RS10225 at 2053.661 kb on - strand, within A4249_RS10225 at 2053.661 kb on - strand, within A4249_RS10225 at 2053.661 kb on - strand, within A4249_RS10225 at 2053.661 kb on - strand, within A4249_RS10225 at 2053.661 kb on - strand, within A4249_RS10225 at 2053.765 kb on + strand at 2053.765 kb on + strand at 2053.765 kb on + strand at 2053.766 kb on - strand at 2053.766 kb on - strand at 2053.766 kb on - strand at 2053.779 kb on + strand at 2053.779 kb on + strand at 2053.779 kb on + strand at 2053.779 kb on + strand at 2053.780 kb on - strand at 2053.780 kb on - strand at 2053.780 kb on - strand at 2053.780 kb on - strand at 2053.780 kb on - strand at 2054.971 kb on - strand at 2054.986 kb on - strand at 2054.986 kb on - strand at 2054.986 kb on - strand at 2055.124 kb on + strand, within A4249_RS10235 at 2055.124 kb on + strand, within A4249_RS10235 at 2055.124 kb on + strand, within A4249_RS10235 at 2055.124 kb on + strand, within A4249_RS10235 at 2055.124 kb on + strand, within A4249_RS10235 at 2055.125 kb on - strand, within A4249_RS10235 at 2055.125 kb on - strand, within A4249_RS10235 at 2055.125 kb on - strand, within A4249_RS10235 at 2055.372 kb on + strand, within A4249_RS10235 at 2055.372 kb on + strand, within A4249_RS10235 at 2055.372 kb on + strand, within A4249_RS10235 at 2055.372 kb on + strand, within A4249_RS10235 at 2055.372 kb on + strand, within A4249_RS10235 at 2055.372 kb on + strand, within A4249_RS10235 at 2055.373 kb on - strand, within A4249_RS10235 at 2055.373 kb on - strand, within A4249_RS10235 at 2055.373 kb on - strand, within A4249_RS10235 at 2055.384 kb on - strand, within A4249_RS10235 at 2055.384 kb on - strand, within A4249_RS10235 at 2055.399 kb on - strand, within A4249_RS10235 at 2055.442 kb on + strand, within A4249_RS10235 at 2055.443 kb on - strand, within A4249_RS10235 at 2055.443 kb on - strand, within A4249_RS10235 at 2055.613 kb on + strand, within A4249_RS10235 at 2055.613 kb on + strand, within A4249_RS10235 at 2055.613 kb on + strand, within A4249_RS10235 at 2055.613 kb on + strand, within A4249_RS10235 at 2055.614 kb on - strand, within A4249_RS10235 at 2055.614 kb on - strand, within A4249_RS10235 at 2055.614 kb on - strand, within A4249_RS10235 at 2055.614 kb on - strand, within A4249_RS10235 at 2055.614 kb on - strand, within A4249_RS10235 at 2055.718 kb on + strand, within A4249_RS10235 at 2055.718 kb on + strand, within A4249_RS10235 at 2055.721 kb on + strand, within A4249_RS10235 at 2055.721 kb on + strand, within A4249_RS10235 at 2055.721 kb on + strand, within A4249_RS10235 at 2055.721 kb on + strand, within A4249_RS10235 at 2055.722 kb on - strand, within A4249_RS10235 at 2055.722 kb on - strand, within A4249_RS10235 at 2055.781 kb on + strand, within A4249_RS10235 at 2055.781 kb on + strand, within A4249_RS10235 at 2055.782 kb on - strand, within A4249_RS10235 at 2055.782 kb on - strand, within A4249_RS10235 at 2055.782 kb on - strand, within A4249_RS10235 at 2055.782 kb on - strand, within A4249_RS10235
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 30C remove 2,052,971 + A4249_RS10225 0.25 -1.9 2,052,971 + A4249_RS10225 0.25 -0.0 2,052,971 + A4249_RS10225 0.25 +1.0 2,052,972 - A4249_RS10225 0.25 +0.5 2,052,972 - A4249_RS10225 0.25 +0.5 2,053,128 + A4249_RS10225 0.39 -0.0 2,053,128 + A4249_RS10225 0.39 -0.1 2,053,129 - A4249_RS10225 0.39 -0.3 2,053,129 - A4249_RS10225 0.39 +0.1 2,053,249 - A4249_RS10225 0.49 +1.9 2,053,257 + A4249_RS10225 0.50 -0.5 2,053,258 - A4249_RS10225 0.50 -0.9 2,053,258 - A4249_RS10225 0.50 +0.3 2,053,370 + A4249_RS10225 0.60 +0.3 2,053,370 + A4249_RS10225 0.60 +0.2 2,053,371 - A4249_RS10225 0.60 +0.6 2,053,371 - A4249_RS10225 0.60 -0.8 2,053,371 - A4249_RS10225 0.60 -0.7 2,053,458 + A4249_RS10225 0.67 +0.7 2,053,458 + A4249_RS10225 0.67 +0.5 2,053,458 + A4249_RS10225 0.67 -0.5 2,053,459 - A4249_RS10225 0.67 +0.2 2,053,459 - A4249_RS10225 0.67 +0.3 2,053,576 - A4249_RS10225 0.77 -0.7 2,053,660 + A4249_RS10225 0.84 -1.0 2,053,660 + A4249_RS10225 0.84 -0.7 2,053,660 + A4249_RS10225 0.84 -0.7 2,053,660 + A4249_RS10225 0.84 +0.3 2,053,661 - A4249_RS10225 0.84 -0.4 2,053,661 - A4249_RS10225 0.84 -0.2 2,053,661 - A4249_RS10225 0.84 -0.1 2,053,661 - A4249_RS10225 0.84 +0.9 2,053,661 - A4249_RS10225 0.84 +0.3 2,053,661 - A4249_RS10225 0.84 +0.6 2,053,661 - A4249_RS10225 0.84 -0.2 2,053,765 + -0.7 2,053,765 + +0.2 2,053,765 + -0.3 2,053,766 - -2.2 2,053,766 - -0.9 2,053,766 - +0.1 2,053,779 + -0.1 2,053,779 + +2.5 2,053,779 + +1.9 2,053,779 + +0.4 2,053,780 - -1.0 2,053,780 - -1.7 2,053,780 - -0.4 2,053,780 - -0.4 2,053,780 - -1.7 2,054,971 - +0.7 2,054,986 - -4.3 2,054,986 - +0.5 2,054,986 - -0.1 2,055,124 + A4249_RS10235 0.11 +3.1 2,055,124 + A4249_RS10235 0.11 -0.1 2,055,124 + A4249_RS10235 0.11 -0.1 2,055,124 + A4249_RS10235 0.11 +0.8 2,055,124 + A4249_RS10235 0.11 +1.4 2,055,125 - A4249_RS10235 0.11 +0.6 2,055,125 - A4249_RS10235 0.11 +1.8 2,055,125 - A4249_RS10235 0.11 +0.7 2,055,372 + A4249_RS10235 0.39 +1.1 2,055,372 + A4249_RS10235 0.39 -0.2 2,055,372 + A4249_RS10235 0.39 +0.8 2,055,372 + A4249_RS10235 0.39 -1.7 2,055,372 + A4249_RS10235 0.39 -0.7 2,055,372 + A4249_RS10235 0.39 -0.0 2,055,373 - A4249_RS10235 0.39 +0.1 2,055,373 - A4249_RS10235 0.39 +0.3 2,055,373 - A4249_RS10235 0.39 +1.9 2,055,384 - A4249_RS10235 0.40 -0.2 2,055,384 - A4249_RS10235 0.40 -0.5 2,055,399 - A4249_RS10235 0.42 +1.1 2,055,442 + A4249_RS10235 0.47 -0.9 2,055,443 - A4249_RS10235 0.47 -0.7 2,055,443 - A4249_RS10235 0.47 +0.2 2,055,613 + A4249_RS10235 0.65 +0.2 2,055,613 + A4249_RS10235 0.65 +1.8 2,055,613 + A4249_RS10235 0.65 +0.3 2,055,613 + A4249_RS10235 0.65 +0.1 2,055,614 - A4249_RS10235 0.66 -1.0 2,055,614 - A4249_RS10235 0.66 -1.5 2,055,614 - A4249_RS10235 0.66 +0.4 2,055,614 - A4249_RS10235 0.66 +0.4 2,055,614 - A4249_RS10235 0.66 +0.8 2,055,718 + A4249_RS10235 0.77 -0.0 2,055,718 + A4249_RS10235 0.77 +0.3 2,055,721 + A4249_RS10235 0.77 +1.6 2,055,721 + A4249_RS10235 0.77 +0.6 2,055,721 + A4249_RS10235 0.77 +1.0 2,055,721 + A4249_RS10235 0.77 -0.6 2,055,722 - A4249_RS10235 0.78 +1.2 2,055,722 - A4249_RS10235 0.78 +1.0 2,055,781 + A4249_RS10235 0.84 -0.7 2,055,781 + A4249_RS10235 0.84 +0.7 2,055,782 - A4249_RS10235 0.84 -0.4 2,055,782 - A4249_RS10235 0.84 -0.9 2,055,782 - A4249_RS10235 0.84 +0.1 2,055,782 - A4249_RS10235 0.84 +0.0
Or see this region's nucleotide sequence