Experiment: D-Glucose (C); 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10090 and A4249_RS10095 are separated by 4 nucleotides A4249_RS10095 and A4249_RS10100 are separated by 17 nucleotides A4249_RS10100 and A4249_RS10105 are separated by 3 nucleotides A4249_RS10105 and A4249_RS10110 are separated by 97 nucleotides
A4249_RS10090: A4249_RS10090 - glycoside hydrolase/phage tail family protein, at 2,026,719 to 2,030,417
_RS10090
A4249_RS10095: A4249_RS10095 - NlpC/P60 family protein, at 2,030,422 to 2,030,889
_RS10095
A4249_RS10100: A4249_RS10100 - DUF2163 domain-containing protein, at 2,030,907 to 2,031,554
_RS10100
A4249_RS10105: A4249_RS10105 - DUF2460 domain-containing protein, at 2,031,558 to 2,032,169
_RS10105
A4249_RS10110: A4249_RS10110 - DUF805 domain-containing protein, at 2,032,267 to 2,032,968
_RS10110
Position (kb)
2030
2031
2032 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2029.927 kb on + strand, within A4249_RS10090 at 2029.927 kb on + strand, within A4249_RS10090 at 2029.927 kb on + strand, within A4249_RS10090 at 2029.927 kb on + strand, within A4249_RS10090 at 2029.927 kb on + strand, within A4249_RS10090 at 2029.927 kb on + strand, within A4249_RS10090 at 2029.927 kb on + strand, within A4249_RS10090 at 2029.927 kb on + strand, within A4249_RS10090 at 2029.927 kb on + strand, within A4249_RS10090 at 2029.927 kb on + strand, within A4249_RS10090 at 2029.927 kb on + strand, within A4249_RS10090 at 2029.927 kb on + strand, within A4249_RS10090 at 2029.927 kb on + strand, within A4249_RS10090 at 2029.928 kb on - strand, within A4249_RS10090 at 2029.928 kb on - strand, within A4249_RS10090 at 2029.928 kb on - strand, within A4249_RS10090 at 2029.928 kb on - strand, within A4249_RS10090 at 2029.928 kb on - strand, within A4249_RS10090 at 2029.928 kb on - strand, within A4249_RS10090 at 2029.928 kb on - strand, within A4249_RS10090 at 2029.928 kb on - strand, within A4249_RS10090 at 2029.928 kb on - strand, within A4249_RS10090 at 2029.928 kb on - strand, within A4249_RS10090 at 2029.928 kb on - strand, within A4249_RS10090 at 2029.928 kb on - strand, within A4249_RS10090 at 2029.928 kb on - strand, within A4249_RS10090 at 2029.928 kb on - strand, within A4249_RS10090 at 2030.116 kb on + strand at 2030.122 kb on + strand at 2030.122 kb on + strand at 2030.122 kb on + strand at 2030.122 kb on + strand at 2030.123 kb on - strand at 2030.123 kb on - strand at 2030.123 kb on - strand at 2030.123 kb on - strand at 2030.123 kb on - strand at 2030.123 kb on - strand at 2030.123 kb on - strand at 2030.123 kb on - strand at 2030.123 kb on - strand at 2030.123 kb on - strand at 2030.123 kb on - strand at 2030.162 kb on + strand at 2030.163 kb on - strand at 2030.196 kb on + strand at 2030.196 kb on + strand at 2030.196 kb on + strand at 2030.196 kb on + strand at 2030.197 kb on - strand at 2030.197 kb on - strand at 2030.423 kb on + strand at 2030.423 kb on + strand at 2030.423 kb on + strand at 2030.424 kb on - strand at 2030.424 kb on - strand at 2030.558 kb on + strand, within A4249_RS10095 at 2030.559 kb on - strand, within A4249_RS10095 at 2030.858 kb on + strand at 2030.951 kb on - strand at 2031.115 kb on + strand, within A4249_RS10100 at 2031.115 kb on + strand, within A4249_RS10100 at 2031.115 kb on + strand, within A4249_RS10100 at 2031.115 kb on + strand, within A4249_RS10100 at 2031.115 kb on + strand, within A4249_RS10100 at 2031.116 kb on - strand, within A4249_RS10100 at 2031.116 kb on - strand, within A4249_RS10100 at 2031.116 kb on - strand, within A4249_RS10100 at 2031.193 kb on - strand, within A4249_RS10100 at 2031.193 kb on - strand, within A4249_RS10100 at 2031.259 kb on - strand, within A4249_RS10100 at 2031.308 kb on + strand, within A4249_RS10100 at 2031.544 kb on - strand at 2031.824 kb on - strand, within A4249_RS10105 at 2031.949 kb on + strand, within A4249_RS10105 at 2032.288 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 30C remove 2,029,927 + A4249_RS10090 0.87 -0.4 2,029,927 + A4249_RS10090 0.87 +0.6 2,029,927 + A4249_RS10090 0.87 +0.6 2,029,927 + A4249_RS10090 0.87 +0.4 2,029,927 + A4249_RS10090 0.87 +0.4 2,029,927 + A4249_RS10090 0.87 -0.1 2,029,927 + A4249_RS10090 0.87 +0.6 2,029,927 + A4249_RS10090 0.87 +1.9 2,029,927 + A4249_RS10090 0.87 -0.3 2,029,927 + A4249_RS10090 0.87 -1.5 2,029,927 + A4249_RS10090 0.87 -0.5 2,029,927 + A4249_RS10090 0.87 +0.3 2,029,927 + A4249_RS10090 0.87 -0.7 2,029,928 - A4249_RS10090 0.87 -1.7 2,029,928 - A4249_RS10090 0.87 -0.0 2,029,928 - A4249_RS10090 0.87 +0.4 2,029,928 - A4249_RS10090 0.87 -0.4 2,029,928 - A4249_RS10090 0.87 +0.5 2,029,928 - A4249_RS10090 0.87 +3.6 2,029,928 - A4249_RS10090 0.87 +0.9 2,029,928 - A4249_RS10090 0.87 -1.1 2,029,928 - A4249_RS10090 0.87 -0.5 2,029,928 - A4249_RS10090 0.87 -0.8 2,029,928 - A4249_RS10090 0.87 -0.3 2,029,928 - A4249_RS10090 0.87 -1.7 2,029,928 - A4249_RS10090 0.87 +1.5 2,029,928 - A4249_RS10090 0.87 +2.9 2,030,116 + -1.9 2,030,122 + +0.2 2,030,122 + -0.7 2,030,122 + -0.7 2,030,122 + -1.5 2,030,123 - -0.9 2,030,123 - +0.2 2,030,123 - -0.2 2,030,123 - -0.7 2,030,123 - +0.9 2,030,123 - +0.5 2,030,123 - -2.2 2,030,123 - -2.4 2,030,123 - +1.3 2,030,123 - -1.2 2,030,123 - +0.2 2,030,162 + +1.7 2,030,163 - +1.3 2,030,196 + -1.2 2,030,196 + -0.8 2,030,196 + +0.2 2,030,196 + -0.7 2,030,197 - +0.6 2,030,197 - +0.8 2,030,423 + +0.3 2,030,423 + +0.5 2,030,423 + -2.0 2,030,424 - -0.4 2,030,424 - +1.3 2,030,558 + A4249_RS10095 0.29 +0.3 2,030,559 - A4249_RS10095 0.29 -1.2 2,030,858 + -0.0 2,030,951 - -0.4 2,031,115 + A4249_RS10100 0.32 -1.3 2,031,115 + A4249_RS10100 0.32 +2.5 2,031,115 + A4249_RS10100 0.32 -2.6 2,031,115 + A4249_RS10100 0.32 -0.7 2,031,115 + A4249_RS10100 0.32 -1.0 2,031,116 - A4249_RS10100 0.32 -1.0 2,031,116 - A4249_RS10100 0.32 +0.4 2,031,116 - A4249_RS10100 0.32 -0.2 2,031,193 - A4249_RS10100 0.44 -0.2 2,031,193 - A4249_RS10100 0.44 -0.4 2,031,259 - A4249_RS10100 0.54 +0.9 2,031,308 + A4249_RS10100 0.62 -2.0 2,031,544 - -2.3 2,031,824 - A4249_RS10105 0.43 -2.7 2,031,949 + A4249_RS10105 0.64 +1.2 2,032,288 + -0.7
Or see this region's nucleotide sequence