Experiment: D-Glucose (C); 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS09725 and A4249_RS09730 are separated by 66 nucleotides A4249_RS09730 and A4249_RS09735 are separated by 85 nucleotides A4249_RS09735 and A4249_RS09740 are separated by 14 nucleotides A4249_RS09740 and A4249_RS09745 are separated by 53 nucleotides A4249_RS09745 and A4249_RS09750 are separated by 20 nucleotides
A4249_RS09725: A4249_RS09725 - hypothetical protein, at 1,938,988 to 1,939,485
_RS09725
A4249_RS09730: A4249_RS09730 - CsbD family protein, at 1,939,552 to 1,939,731
_RS09730
A4249_RS09735: A4249_RS09735 - NUDIX domain-containing protein, at 1,939,817 to 1,940,260
_RS09735
A4249_RS09740: A4249_RS09740 - histidine kinase dimerization/phosphoacceptor domain -containing protein, at 1,940,275 to 1,941,261
_RS09740
A4249_RS09745: A4249_RS09745 - response regulator, at 1,941,315 to 1,941,713
_RS09745
A4249_RS09750: A4249_RS09750 - CHASE3 domain-containing protein, at 1,941,734 to 1,943,260
_RS09750
Position (kb) 1940
1941
1942 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 1939.315 kb on + strand, within A4249_RS09725 at 1939.316 kb on - strand, within A4249_RS09725 at 1939.316 kb on - strand, within A4249_RS09725 at 1939.316 kb on - strand, within A4249_RS09725 at 1939.543 kb on + strand at 1939.543 kb on + strand at 1939.543 kb on + strand at 1939.544 kb on - strand at 1939.544 kb on - strand at 1939.544 kb on - strand at 1939.553 kb on + strand at 1939.553 kb on + strand at 1939.553 kb on + strand at 1939.554 kb on - strand at 1939.554 kb on - strand at 1939.554 kb on - strand at 1939.554 kb on - strand at 1939.554 kb on - strand at 1939.554 kb on - strand at 1939.593 kb on + strand, within A4249_RS09730 at 1939.593 kb on + strand, within A4249_RS09730 at 1939.594 kb on - strand, within A4249_RS09730 at 1939.594 kb on - strand, within A4249_RS09730 at 1939.677 kb on + strand, within A4249_RS09730 at 1939.677 kb on + strand, within A4249_RS09730 at 1939.677 kb on + strand, within A4249_RS09730 at 1939.677 kb on + strand, within A4249_RS09730 at 1939.678 kb on - strand, within A4249_RS09730 at 1939.678 kb on - strand, within A4249_RS09730 at 1939.678 kb on - strand, within A4249_RS09730 at 1939.742 kb on + strand at 1939.742 kb on + strand at 1939.742 kb on + strand at 1939.763 kb on - strand at 1939.763 kb on - strand at 1939.763 kb on - strand at 1939.784 kb on - strand at 1939.797 kb on - strand at 1939.797 kb on - strand at 1940.013 kb on + strand, within A4249_RS09735 at 1940.013 kb on + strand, within A4249_RS09735 at 1940.013 kb on + strand, within A4249_RS09735 at 1940.014 kb on - strand, within A4249_RS09735 at 1940.139 kb on + strand, within A4249_RS09735 at 1940.139 kb on + strand, within A4249_RS09735 at 1940.139 kb on + strand, within A4249_RS09735 at 1940.139 kb on + strand, within A4249_RS09735 at 1940.139 kb on + strand, within A4249_RS09735 at 1940.140 kb on - strand, within A4249_RS09735 at 1940.140 kb on - strand, within A4249_RS09735 at 1940.223 kb on + strand at 1940.223 kb on + strand at 1940.277 kb on - strand at 1940.472 kb on + strand, within A4249_RS09740 at 1940.501 kb on + strand, within A4249_RS09740 at 1940.501 kb on + strand, within A4249_RS09740 at 1940.501 kb on + strand, within A4249_RS09740 at 1940.502 kb on - strand, within A4249_RS09740 at 1940.507 kb on + strand, within A4249_RS09740 at 1940.507 kb on + strand, within A4249_RS09740 at 1940.507 kb on + strand, within A4249_RS09740 at 1940.507 kb on + strand, within A4249_RS09740 at 1940.507 kb on + strand, within A4249_RS09740 at 1940.507 kb on + strand, within A4249_RS09740 at 1940.507 kb on + strand, within A4249_RS09740 at 1940.508 kb on - strand, within A4249_RS09740 at 1940.508 kb on - strand, within A4249_RS09740 at 1940.508 kb on - strand, within A4249_RS09740 at 1940.508 kb on - strand, within A4249_RS09740 at 1940.508 kb on - strand, within A4249_RS09740 at 1940.508 kb on - strand, within A4249_RS09740 at 1940.508 kb on - strand, within A4249_RS09740 at 1940.508 kb on - strand, within A4249_RS09740 at 1940.663 kb on + strand, within A4249_RS09740 at 1940.663 kb on + strand, within A4249_RS09740 at 1940.663 kb on + strand, within A4249_RS09740 at 1940.663 kb on + strand, within A4249_RS09740 at 1940.663 kb on + strand, within A4249_RS09740 at 1940.663 kb on + strand, within A4249_RS09740 at 1940.663 kb on + strand, within A4249_RS09740 at 1940.664 kb on - strand, within A4249_RS09740 at 1940.664 kb on - strand, within A4249_RS09740 at 1940.664 kb on - strand, within A4249_RS09740 at 1940.664 kb on - strand, within A4249_RS09740 at 1940.664 kb on - strand, within A4249_RS09740 at 1940.702 kb on + strand, within A4249_RS09740 at 1940.702 kb on + strand, within A4249_RS09740 at 1940.702 kb on + strand, within A4249_RS09740 at 1940.702 kb on + strand, within A4249_RS09740 at 1940.702 kb on + strand, within A4249_RS09740 at 1940.703 kb on - strand, within A4249_RS09740 at 1940.703 kb on - strand, within A4249_RS09740 at 1940.703 kb on - strand, within A4249_RS09740 at 1940.703 kb on - strand, within A4249_RS09740 at 1940.703 kb on - strand, within A4249_RS09740 at 1941.002 kb on + strand, within A4249_RS09740 at 1941.002 kb on + strand, within A4249_RS09740 at 1941.002 kb on + strand, within A4249_RS09740 at 1941.002 kb on + strand, within A4249_RS09740 at 1941.003 kb on - strand, within A4249_RS09740 at 1941.003 kb on - strand, within A4249_RS09740 at 1941.003 kb on - strand, within A4249_RS09740 at 1941.003 kb on - strand, within A4249_RS09740 at 1941.065 kb on + strand, within A4249_RS09740 at 1941.065 kb on + strand, within A4249_RS09740 at 1941.065 kb on + strand, within A4249_RS09740 at 1941.065 kb on + strand, within A4249_RS09740 at 1941.065 kb on + strand, within A4249_RS09740 at 1941.065 kb on + strand, within A4249_RS09740 at 1941.066 kb on - strand, within A4249_RS09740 at 1941.066 kb on - strand, within A4249_RS09740 at 1941.107 kb on - strand, within A4249_RS09740 at 1941.107 kb on - strand, within A4249_RS09740 at 1941.135 kb on + strand, within A4249_RS09740 at 1941.135 kb on + strand, within A4249_RS09740 at 1941.135 kb on + strand, within A4249_RS09740 at 1941.135 kb on + strand, within A4249_RS09740 at 1941.135 kb on + strand, within A4249_RS09740 at 1941.135 kb on + strand, within A4249_RS09740 at 1941.135 kb on + strand, within A4249_RS09740 at 1941.136 kb on - strand, within A4249_RS09740 at 1941.136 kb on - strand, within A4249_RS09740 at 1941.136 kb on - strand, within A4249_RS09740 at 1941.136 kb on - strand, within A4249_RS09740 at 1941.136 kb on - strand, within A4249_RS09740 at 1941.136 kb on - strand, within A4249_RS09740 at 1941.136 kb on - strand, within A4249_RS09740 at 1941.136 kb on - strand, within A4249_RS09740 at 1941.136 kb on - strand, within A4249_RS09740 at 1941.136 kb on - strand, within A4249_RS09740 at 1941.137 kb on + strand, within A4249_RS09740 at 1941.137 kb on + strand, within A4249_RS09740 at 1941.137 kb on + strand, within A4249_RS09740 at 1941.137 kb on + strand, within A4249_RS09740 at 1941.137 kb on + strand, within A4249_RS09740 at 1941.137 kb on + strand, within A4249_RS09740 at 1941.137 kb on + strand, within A4249_RS09740 at 1941.137 kb on + strand, within A4249_RS09740 at 1941.137 kb on + strand, within A4249_RS09740 at 1941.137 kb on + strand, within A4249_RS09740 at 1941.137 kb on + strand, within A4249_RS09740 at 1941.137 kb on + strand, within A4249_RS09740 at 1941.137 kb on + strand, within A4249_RS09740 at 1941.138 kb on - strand, within A4249_RS09740 at 1941.138 kb on - strand, within A4249_RS09740 at 1941.138 kb on - strand, within A4249_RS09740 at 1941.138 kb on - strand, within A4249_RS09740 at 1941.138 kb on - strand, within A4249_RS09740 at 1941.138 kb on - strand, within A4249_RS09740 at 1941.138 kb on - strand, within A4249_RS09740 at 1941.138 kb on - strand, within A4249_RS09740 at 1941.138 kb on - strand, within A4249_RS09740 at 1941.138 kb on - strand, within A4249_RS09740 at 1941.138 kb on - strand, within A4249_RS09740 at 1941.138 kb on - strand, within A4249_RS09740 at 1941.138 kb on - strand, within A4249_RS09740 at 1941.138 kb on - strand, within A4249_RS09740 at 1941.138 kb on - strand, within A4249_RS09740 at 1941.138 kb on - strand, within A4249_RS09740 at 1941.138 kb on - strand, within A4249_RS09740 at 1941.281 kb on + strand at 1941.282 kb on - strand at 1941.282 kb on - strand at 1941.282 kb on - strand at 1941.282 kb on - strand at 1941.282 kb on - strand at 1941.294 kb on + strand at 1941.295 kb on - strand at 1941.295 kb on - strand at 1941.295 kb on - strand at 1941.385 kb on + strand, within A4249_RS09745 at 1941.385 kb on + strand, within A4249_RS09745 at 1941.386 kb on - strand, within A4249_RS09745 at 1941.386 kb on - strand, within A4249_RS09745 at 1941.386 kb on - strand, within A4249_RS09745 at 1941.406 kb on + strand, within A4249_RS09745 at 1941.406 kb on + strand, within A4249_RS09745 at 1941.406 kb on + strand, within A4249_RS09745 at 1941.406 kb on + strand, within A4249_RS09745 at 1941.406 kb on + strand, within A4249_RS09745 at 1941.406 kb on + strand, within A4249_RS09745 at 1941.407 kb on - strand, within A4249_RS09745 at 1941.428 kb on - strand, within A4249_RS09745 at 1941.428 kb on - strand, within A4249_RS09745 at 1941.536 kb on + strand, within A4249_RS09745 at 1941.536 kb on + strand, within A4249_RS09745 at 1941.537 kb on - strand, within A4249_RS09745 at 1941.537 kb on - strand, within A4249_RS09745 at 1941.604 kb on + strand, within A4249_RS09745 at 1941.604 kb on + strand, within A4249_RS09745 at 1941.604 kb on + strand, within A4249_RS09745 at 1941.604 kb on + strand, within A4249_RS09745 at 1941.604 kb on + strand, within A4249_RS09745 at 1941.605 kb on - strand, within A4249_RS09745 at 1942.044 kb on + strand, within A4249_RS09750 at 1942.044 kb on + strand, within A4249_RS09750 at 1942.045 kb on - strand, within A4249_RS09750 at 1942.045 kb on - strand, within A4249_RS09750 at 1942.168 kb on + strand, within A4249_RS09750 at 1942.168 kb on + strand, within A4249_RS09750 at 1942.168 kb on + strand, within A4249_RS09750 at 1942.168 kb on + strand, within A4249_RS09750 at 1942.169 kb on - strand, within A4249_RS09750 at 1942.171 kb on + strand, within A4249_RS09750 at 1942.171 kb on + strand, within A4249_RS09750 at 1942.171 kb on + strand, within A4249_RS09750 at 1942.177 kb on + strand, within A4249_RS09750
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 30C remove 1,939,315 + A4249_RS09725 0.66 +0.5 1,939,316 - A4249_RS09725 0.66 +1.4 1,939,316 - A4249_RS09725 0.66 -2.0 1,939,316 - A4249_RS09725 0.66 +1.3 1,939,543 + +2.1 1,939,543 + -0.5 1,939,543 + -0.4 1,939,544 - -2.3 1,939,544 - -3.6 1,939,544 - +0.6 1,939,553 + -0.4 1,939,553 + -1.7 1,939,553 + +1.7 1,939,554 - +0.4 1,939,554 - +0.6 1,939,554 - -0.3 1,939,554 - -0.0 1,939,554 - -1.9 1,939,554 - -0.6 1,939,593 + A4249_RS09730 0.23 +1.2 1,939,593 + A4249_RS09730 0.23 +0.3 1,939,594 - A4249_RS09730 0.23 +2.6 1,939,594 - A4249_RS09730 0.23 +0.6 1,939,677 + A4249_RS09730 0.69 +0.2 1,939,677 + A4249_RS09730 0.69 +0.9 1,939,677 + A4249_RS09730 0.69 +0.6 1,939,677 + A4249_RS09730 0.69 -0.1 1,939,678 - A4249_RS09730 0.70 +1.4 1,939,678 - A4249_RS09730 0.70 -0.1 1,939,678 - A4249_RS09730 0.70 -0.7 1,939,742 + -0.1 1,939,742 + +0.7 1,939,742 + -1.3 1,939,763 - -0.2 1,939,763 - +0.7 1,939,763 - -0.9 1,939,784 - +0.9 1,939,797 - -0.8 1,939,797 - +1.7 1,940,013 + A4249_RS09735 0.44 +2.2 1,940,013 + A4249_RS09735 0.44 +0.7 1,940,013 + A4249_RS09735 0.44 +1.0 1,940,014 - A4249_RS09735 0.44 +0.7 1,940,139 + A4249_RS09735 0.73 +1.7 1,940,139 + A4249_RS09735 0.73 +0.8 1,940,139 + A4249_RS09735 0.73 +2.0 1,940,139 + A4249_RS09735 0.73 -0.3 1,940,139 + A4249_RS09735 0.73 +1.3 1,940,140 - A4249_RS09735 0.73 +1.5 1,940,140 - A4249_RS09735 0.73 -0.5 1,940,223 + +0.4 1,940,223 + +1.4 1,940,277 - +0.4 1,940,472 + A4249_RS09740 0.20 +3.4 1,940,501 + A4249_RS09740 0.23 +3.5 1,940,501 + A4249_RS09740 0.23 +3.3 1,940,501 + A4249_RS09740 0.23 +3.4 1,940,502 - A4249_RS09740 0.23 +2.8 1,940,507 + A4249_RS09740 0.24 +2.7 1,940,507 + A4249_RS09740 0.24 +3.5 1,940,507 + A4249_RS09740 0.24 +3.4 1,940,507 + A4249_RS09740 0.24 +3.3 1,940,507 + A4249_RS09740 0.24 +3.7 1,940,507 + A4249_RS09740 0.24 +3.5 1,940,507 + A4249_RS09740 0.24 +2.0 1,940,508 - A4249_RS09740 0.24 +3.2 1,940,508 - A4249_RS09740 0.24 +2.9 1,940,508 - A4249_RS09740 0.24 +2.8 1,940,508 - A4249_RS09740 0.24 +0.3 1,940,508 - A4249_RS09740 0.24 +3.7 1,940,508 - A4249_RS09740 0.24 +3.7 1,940,508 - A4249_RS09740 0.24 +3.2 1,940,508 - A4249_RS09740 0.24 +2.9 1,940,663 + A4249_RS09740 0.39 +2.9 1,940,663 + A4249_RS09740 0.39 +3.6 1,940,663 + A4249_RS09740 0.39 +3.5 1,940,663 + A4249_RS09740 0.39 +3.4 1,940,663 + A4249_RS09740 0.39 +3.3 1,940,663 + A4249_RS09740 0.39 +2.9 1,940,663 + A4249_RS09740 0.39 +3.4 1,940,664 - A4249_RS09740 0.39 +3.1 1,940,664 - A4249_RS09740 0.39 +3.1 1,940,664 - A4249_RS09740 0.39 +3.1 1,940,664 - A4249_RS09740 0.39 +3.1 1,940,664 - A4249_RS09740 0.39 +2.8 1,940,702 + A4249_RS09740 0.43 +3.1 1,940,702 + A4249_RS09740 0.43 +3.4 1,940,702 + A4249_RS09740 0.43 +3.3 1,940,702 + A4249_RS09740 0.43 +3.5 1,940,702 + A4249_RS09740 0.43 +2.6 1,940,703 - A4249_RS09740 0.43 +3.2 1,940,703 - A4249_RS09740 0.43 +3.3 1,940,703 - A4249_RS09740 0.43 +3.0 1,940,703 - A4249_RS09740 0.43 +2.8 1,940,703 - A4249_RS09740 0.43 +3.1 1,941,002 + A4249_RS09740 0.74 +3.2 1,941,002 + A4249_RS09740 0.74 +3.1 1,941,002 + A4249_RS09740 0.74 +2.5 1,941,002 + A4249_RS09740 0.74 +3.9 1,941,003 - A4249_RS09740 0.74 +3.4 1,941,003 - A4249_RS09740 0.74 +3.4 1,941,003 - A4249_RS09740 0.74 +3.1 1,941,003 - A4249_RS09740 0.74 +2.9 1,941,065 + A4249_RS09740 0.80 +3.3 1,941,065 + A4249_RS09740 0.80 +3.2 1,941,065 + A4249_RS09740 0.80 +3.5 1,941,065 + A4249_RS09740 0.80 +3.5 1,941,065 + A4249_RS09740 0.80 +3.3 1,941,065 + A4249_RS09740 0.80 +3.4 1,941,066 - A4249_RS09740 0.80 +3.4 1,941,066 - A4249_RS09740 0.80 +3.1 1,941,107 - A4249_RS09740 0.84 +3.5 1,941,107 - A4249_RS09740 0.84 +3.1 1,941,135 + A4249_RS09740 0.87 +3.4 1,941,135 + A4249_RS09740 0.87 +3.2 1,941,135 + A4249_RS09740 0.87 +3.9 1,941,135 + A4249_RS09740 0.87 +3.5 1,941,135 + A4249_RS09740 0.87 +3.2 1,941,135 + A4249_RS09740 0.87 +3.4 1,941,135 + A4249_RS09740 0.87 +3.6 1,941,136 - A4249_RS09740 0.87 +3.4 1,941,136 - A4249_RS09740 0.87 +3.5 1,941,136 - A4249_RS09740 0.87 +3.2 1,941,136 - A4249_RS09740 0.87 +3.0 1,941,136 - A4249_RS09740 0.87 +3.6 1,941,136 - A4249_RS09740 0.87 +3.2 1,941,136 - A4249_RS09740 0.87 +3.5 1,941,136 - A4249_RS09740 0.87 +0.3 1,941,136 - A4249_RS09740 0.87 +3.3 1,941,136 - A4249_RS09740 0.87 +3.3 1,941,137 + A4249_RS09740 0.87 +3.2 1,941,137 + A4249_RS09740 0.87 +2.8 1,941,137 + A4249_RS09740 0.87 +3.5 1,941,137 + A4249_RS09740 0.87 +3.4 1,941,137 + A4249_RS09740 0.87 +3.1 1,941,137 + A4249_RS09740 0.87 +3.3 1,941,137 + A4249_RS09740 0.87 +3.3 1,941,137 + A4249_RS09740 0.87 +3.7 1,941,137 + A4249_RS09740 0.87 +3.6 1,941,137 + A4249_RS09740 0.87 +3.5 1,941,137 + A4249_RS09740 0.87 +3.3 1,941,137 + A4249_RS09740 0.87 +3.5 1,941,137 + A4249_RS09740 0.87 +3.4 1,941,138 - A4249_RS09740 0.87 +3.1 1,941,138 - A4249_RS09740 0.87 +2.5 1,941,138 - A4249_RS09740 0.87 +3.1 1,941,138 - A4249_RS09740 0.87 +3.4 1,941,138 - A4249_RS09740 0.87 +3.3 1,941,138 - A4249_RS09740 0.87 +3.2 1,941,138 - A4249_RS09740 0.87 +2.4 1,941,138 - A4249_RS09740 0.87 +3.1 1,941,138 - A4249_RS09740 0.87 +3.2 1,941,138 - A4249_RS09740 0.87 +3.2 1,941,138 - A4249_RS09740 0.87 +2.9 1,941,138 - A4249_RS09740 0.87 +3.4 1,941,138 - A4249_RS09740 0.87 +3.1 1,941,138 - A4249_RS09740 0.87 +3.5 1,941,138 - A4249_RS09740 0.87 +2.6 1,941,138 - A4249_RS09740 0.87 +3.7 1,941,138 - A4249_RS09740 0.87 +2.9 1,941,281 + +3.4 1,941,282 - +3.1 1,941,282 - +3.1 1,941,282 - +3.4 1,941,282 - +3.3 1,941,282 - +3.2 1,941,294 + +2.3 1,941,295 - +1.9 1,941,295 - +3.3 1,941,295 - +2.2 1,941,385 + A4249_RS09745 0.18 +3.0 1,941,385 + A4249_RS09745 0.18 +3.5 1,941,386 - A4249_RS09745 0.18 +3.1 1,941,386 - A4249_RS09745 0.18 +3.1 1,941,386 - A4249_RS09745 0.18 +4.0 1,941,406 + A4249_RS09745 0.23 +3.4 1,941,406 + A4249_RS09745 0.23 +2.9 1,941,406 + A4249_RS09745 0.23 +3.2 1,941,406 + A4249_RS09745 0.23 +2.7 1,941,406 + A4249_RS09745 0.23 +3.2 1,941,406 + A4249_RS09745 0.23 +2.0 1,941,407 - A4249_RS09745 0.23 +3.2 1,941,428 - A4249_RS09745 0.28 +2.7 1,941,428 - A4249_RS09745 0.28 +2.0 1,941,536 + A4249_RS09745 0.55 +3.3 1,941,536 + A4249_RS09745 0.55 +3.2 1,941,537 - A4249_RS09745 0.56 +2.4 1,941,537 - A4249_RS09745 0.56 +2.3 1,941,604 + A4249_RS09745 0.72 +2.5 1,941,604 + A4249_RS09745 0.72 +3.2 1,941,604 + A4249_RS09745 0.72 +3.5 1,941,604 + A4249_RS09745 0.72 +2.8 1,941,604 + A4249_RS09745 0.72 +2.8 1,941,605 - A4249_RS09745 0.73 +3.1 1,942,044 + A4249_RS09750 0.20 +2.5 1,942,044 + A4249_RS09750 0.20 +3.2 1,942,045 - A4249_RS09750 0.20 +2.9 1,942,045 - A4249_RS09750 0.20 +3.4 1,942,168 + A4249_RS09750 0.28 +3.7 1,942,168 + A4249_RS09750 0.28 +3.3 1,942,168 + A4249_RS09750 0.28 +2.9 1,942,168 + A4249_RS09750 0.28 +2.7 1,942,169 - A4249_RS09750 0.28 +2.7 1,942,171 + A4249_RS09750 0.29 +3.0 1,942,171 + A4249_RS09750 0.29 +3.1 1,942,171 + A4249_RS09750 0.29 +3.0 1,942,177 + A4249_RS09750 0.29 +3.3
Or see this region's nucleotide sequence