Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS09065

Experiment: D-Glucose (C); 30C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS09060 and A4249_RS09065 are separated by 150 nucleotidesA4249_RS09065 and A4249_RS09070 are separated by 3 nucleotides A4249_RS09060: A4249_RS09060 - acyltransferase, at 1,815,703 to 1,816,710 _RS09060 A4249_RS09065: A4249_RS09065 - DUF1801 domain-containing protein, at 1,816,861 to 1,817,265 _RS09065 A4249_RS09070: A4249_RS09070 - NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta, at 1,817,269 to 1,818,693 _RS09070 Position (kb) 1816 1817 1818Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1815.901 kb on + strand, within A4249_RS09060at 1815.902 kb on - strand, within A4249_RS09060at 1815.923 kb on + strand, within A4249_RS09060at 1815.923 kb on + strand, within A4249_RS09060at 1815.923 kb on + strand, within A4249_RS09060at 1815.923 kb on + strand, within A4249_RS09060at 1815.923 kb on + strand, within A4249_RS09060at 1815.923 kb on + strand, within A4249_RS09060at 1815.923 kb on + strand, within A4249_RS09060at 1815.923 kb on + strand, within A4249_RS09060at 1815.923 kb on + strand, within A4249_RS09060at 1815.924 kb on - strand, within A4249_RS09060at 1815.924 kb on - strand, within A4249_RS09060at 1815.924 kb on - strand, within A4249_RS09060at 1815.924 kb on - strand, within A4249_RS09060at 1815.924 kb on - strand, within A4249_RS09060at 1815.924 kb on - strand, within A4249_RS09060at 1815.924 kb on - strand, within A4249_RS09060at 1815.924 kb on - strand, within A4249_RS09060at 1815.924 kb on - strand, within A4249_RS09060at 1815.924 kb on - strand, within A4249_RS09060at 1816.184 kb on + strand, within A4249_RS09060at 1816.185 kb on - strand, within A4249_RS09060at 1816.185 kb on - strand, within A4249_RS09060at 1816.185 kb on - strand, within A4249_RS09060at 1816.185 kb on - strand, within A4249_RS09060at 1816.211 kb on + strand, within A4249_RS09060at 1816.211 kb on + strand, within A4249_RS09060at 1816.211 kb on + strand, within A4249_RS09060at 1816.211 kb on + strand, within A4249_RS09060at 1816.211 kb on + strand, within A4249_RS09060at 1816.212 kb on - strand, within A4249_RS09060at 1816.212 kb on - strand, within A4249_RS09060at 1816.212 kb on - strand, within A4249_RS09060at 1816.212 kb on - strand, within A4249_RS09060at 1816.218 kb on + strand, within A4249_RS09060at 1816.218 kb on + strand, within A4249_RS09060at 1816.219 kb on - strand, within A4249_RS09060at 1816.219 kb on - strand, within A4249_RS09060at 1816.219 kb on - strand, within A4249_RS09060at 1816.238 kb on + strand, within A4249_RS09060at 1816.385 kb on + strand, within A4249_RS09060at 1816.385 kb on + strand, within A4249_RS09060at 1816.385 kb on + strand, within A4249_RS09060at 1816.385 kb on + strand, within A4249_RS09060at 1816.385 kb on + strand, within A4249_RS09060at 1816.386 kb on - strand, within A4249_RS09060at 1816.386 kb on - strand, within A4249_RS09060at 1816.433 kb on - strand, within A4249_RS09060at 1816.522 kb on + strand, within A4249_RS09060at 1816.522 kb on + strand, within A4249_RS09060at 1816.607 kb on + strand, within A4249_RS09060at 1816.608 kb on - strand, within A4249_RS09060at 1816.608 kb on - strand, within A4249_RS09060at 1816.608 kb on - strand, within A4249_RS09060at 1816.647 kb on - strandat 1816.947 kb on + strand, within A4249_RS09065at 1816.947 kb on + strand, within A4249_RS09065at 1816.947 kb on + strand, within A4249_RS09065at 1816.947 kb on + strand, within A4249_RS09065at 1816.947 kb on + strand, within A4249_RS09065at 1816.947 kb on + strand, within A4249_RS09065at 1816.948 kb on - strand, within A4249_RS09065at 1816.948 kb on - strand, within A4249_RS09065at 1816.948 kb on - strand, within A4249_RS09065at 1816.948 kb on - strand, within A4249_RS09065at 1816.948 kb on - strand, within A4249_RS09065at 1816.949 kb on + strand, within A4249_RS09065at 1816.950 kb on - strand, within A4249_RS09065at 1816.950 kb on - strand, within A4249_RS09065at 1816.950 kb on - strand, within A4249_RS09065at 1816.950 kb on - strand, within A4249_RS09065at 1816.992 kb on + strand, within A4249_RS09065at 1816.992 kb on + strand, within A4249_RS09065at 1816.993 kb on - strand, within A4249_RS09065at 1816.993 kb on - strand, within A4249_RS09065at 1816.993 kb on - strand, within A4249_RS09065at 1817.027 kb on + strand, within A4249_RS09065at 1817.027 kb on + strand, within A4249_RS09065at 1817.027 kb on + strand, within A4249_RS09065at 1817.027 kb on + strand, within A4249_RS09065at 1817.028 kb on - strand, within A4249_RS09065at 1817.028 kb on - strand, within A4249_RS09065at 1817.028 kb on - strand, within A4249_RS09065at 1817.438 kb on + strand, within A4249_RS09070at 1817.438 kb on + strand, within A4249_RS09070at 1817.438 kb on + strand, within A4249_RS09070at 1817.438 kb on + strand, within A4249_RS09070at 1817.438 kb on + strand, within A4249_RS09070at 1817.438 kb on + strand, within A4249_RS09070at 1817.439 kb on - strand, within A4249_RS09070at 1817.439 kb on - strand, within A4249_RS09070at 1817.561 kb on + strand, within A4249_RS09070at 1817.562 kb on - strand, within A4249_RS09070at 1817.562 kb on - strand, within A4249_RS09070at 1817.562 kb on - strand, within A4249_RS09070at 1817.595 kb on + strand, within A4249_RS09070at 1817.595 kb on + strand, within A4249_RS09070at 1817.595 kb on + strand, within A4249_RS09070at 1817.595 kb on + strand, within A4249_RS09070at 1817.595 kb on + strand, within A4249_RS09070at 1817.596 kb on - strand, within A4249_RS09070at 1817.596 kb on - strand, within A4249_RS09070at 1817.596 kb on - strand, within A4249_RS09070at 1817.633 kb on + strand, within A4249_RS09070at 1817.633 kb on + strand, within A4249_RS09070at 1817.634 kb on - strand, within A4249_RS09070at 1817.667 kb on - strand, within A4249_RS09070at 1817.667 kb on - strand, within A4249_RS09070at 1817.667 kb on - strand, within A4249_RS09070at 1817.667 kb on - strand, within A4249_RS09070at 1817.714 kb on + strand, within A4249_RS09070at 1817.785 kb on - strand, within A4249_RS09070at 1817.897 kb on + strand, within A4249_RS09070at 1817.897 kb on + strand, within A4249_RS09070at 1817.897 kb on + strand, within A4249_RS09070at 1817.897 kb on + strand, within A4249_RS09070at 1817.897 kb on + strand, within A4249_RS09070at 1817.897 kb on + strand, within A4249_RS09070at 1817.897 kb on + strand, within A4249_RS09070at 1817.897 kb on + strand, within A4249_RS09070at 1817.897 kb on + strand, within A4249_RS09070at 1817.897 kb on + strand, within A4249_RS09070at 1817.898 kb on - strand, within A4249_RS09070at 1817.898 kb on - strand, within A4249_RS09070at 1817.898 kb on - strand, within A4249_RS09070at 1817.898 kb on - strand, within A4249_RS09070at 1817.898 kb on - strand, within A4249_RS09070at 1817.898 kb on - strand, within A4249_RS09070at 1817.898 kb on - strand, within A4249_RS09070at 1817.898 kb on - strand, within A4249_RS09070at 1817.898 kb on - strand, within A4249_RS09070at 1817.898 kb on - strand, within A4249_RS09070at 1817.898 kb on - strand, within A4249_RS09070at 1817.898 kb on - strand, within A4249_RS09070at 1817.898 kb on - strand, within A4249_RS09070at 1817.898 kb on - strand, within A4249_RS09070at 1817.898 kb on - strand, within A4249_RS09070at 1817.953 kb on - strand, within A4249_RS09070at 1817.996 kb on + strand, within A4249_RS09070at 1817.996 kb on + strand, within A4249_RS09070at 1817.997 kb on - strand, within A4249_RS09070at 1817.997 kb on - strand, within A4249_RS09070at 1817.997 kb on - strand, within A4249_RS09070at 1817.997 kb on - strand, within A4249_RS09070

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C); 30C
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1,815,901 + A4249_RS09060 0.20 -2.3
1,815,902 - A4249_RS09060 0.20 -0.8
1,815,923 + A4249_RS09060 0.22 +1.5
1,815,923 + A4249_RS09060 0.22 +0.2
1,815,923 + A4249_RS09060 0.22 -0.8
1,815,923 + A4249_RS09060 0.22 -2.9
1,815,923 + A4249_RS09060 0.22 -1.8
1,815,923 + A4249_RS09060 0.22 -1.1
1,815,923 + A4249_RS09060 0.22 +0.8
1,815,923 + A4249_RS09060 0.22 -0.6
1,815,923 + A4249_RS09060 0.22 +0.2
1,815,924 - A4249_RS09060 0.22 +0.0
1,815,924 - A4249_RS09060 0.22 +0.2
1,815,924 - A4249_RS09060 0.22 +1.8
1,815,924 - A4249_RS09060 0.22 +0.2
1,815,924 - A4249_RS09060 0.22 -1.0
1,815,924 - A4249_RS09060 0.22 +0.8
1,815,924 - A4249_RS09060 0.22 -0.6
1,815,924 - A4249_RS09060 0.22 -0.4
1,815,924 - A4249_RS09060 0.22 +0.4
1,815,924 - A4249_RS09060 0.22 -0.9
1,816,184 + A4249_RS09060 0.48 -0.3
1,816,185 - A4249_RS09060 0.48 +0.2
1,816,185 - A4249_RS09060 0.48 +0.2
1,816,185 - A4249_RS09060 0.48 -0.7
1,816,185 - A4249_RS09060 0.48 +0.2
1,816,211 + A4249_RS09060 0.50 +1.2
1,816,211 + A4249_RS09060 0.50 +0.6
1,816,211 + A4249_RS09060 0.50 +0.1
1,816,211 + A4249_RS09060 0.50 +1.2
1,816,211 + A4249_RS09060 0.50 +2.2
1,816,212 - A4249_RS09060 0.50 -0.1
1,816,212 - A4249_RS09060 0.50 -0.3
1,816,212 - A4249_RS09060 0.50 +2.2
1,816,212 - A4249_RS09060 0.50 +0.2
1,816,218 + A4249_RS09060 0.51 +0.0
1,816,218 + A4249_RS09060 0.51 -0.3
1,816,219 - A4249_RS09060 0.51 +0.4
1,816,219 - A4249_RS09060 0.51 -0.1
1,816,219 - A4249_RS09060 0.51 -0.5
1,816,238 + A4249_RS09060 0.53 +1.5
1,816,385 + A4249_RS09060 0.68 +2.2
1,816,385 + A4249_RS09060 0.68 +0.9
1,816,385 + A4249_RS09060 0.68 -2.1
1,816,385 + A4249_RS09060 0.68 -0.6
1,816,385 + A4249_RS09060 0.68 +1.7
1,816,386 - A4249_RS09060 0.68 +0.2
1,816,386 - A4249_RS09060 0.68 -0.5
1,816,433 - A4249_RS09060 0.72 -0.0
1,816,522 + A4249_RS09060 0.81 -0.8
1,816,522 + A4249_RS09060 0.81 +0.6
1,816,607 + A4249_RS09060 0.90 +0.2
1,816,608 - A4249_RS09060 0.90 -0.7
1,816,608 - A4249_RS09060 0.90 -0.5
1,816,608 - A4249_RS09060 0.90 -0.3
1,816,647 - +1.0
1,816,947 + A4249_RS09065 0.21 +0.4
1,816,947 + A4249_RS09065 0.21 +0.2
1,816,947 + A4249_RS09065 0.21 +2.4
1,816,947 + A4249_RS09065 0.21 +0.1
1,816,947 + A4249_RS09065 0.21 +0.1
1,816,947 + A4249_RS09065 0.21 -0.6
1,816,948 - A4249_RS09065 0.21 -0.6
1,816,948 - A4249_RS09065 0.21 +0.9
1,816,948 - A4249_RS09065 0.21 -2.8
1,816,948 - A4249_RS09065 0.21 -0.1
1,816,948 - A4249_RS09065 0.21 -0.3
1,816,949 + A4249_RS09065 0.22 +0.3
1,816,950 - A4249_RS09065 0.22 -0.2
1,816,950 - A4249_RS09065 0.22 +1.1
1,816,950 - A4249_RS09065 0.22 -1.3
1,816,950 - A4249_RS09065 0.22 -0.3
1,816,992 + A4249_RS09065 0.32 -2.9
1,816,992 + A4249_RS09065 0.32 -0.2
1,816,993 - A4249_RS09065 0.33 +2.7
1,816,993 - A4249_RS09065 0.33 +0.0
1,816,993 - A4249_RS09065 0.33 -1.3
1,817,027 + A4249_RS09065 0.41 -0.3
1,817,027 + A4249_RS09065 0.41 +0.1
1,817,027 + A4249_RS09065 0.41 -1.3
1,817,027 + A4249_RS09065 0.41 +0.3
1,817,028 - A4249_RS09065 0.41 -0.2
1,817,028 - A4249_RS09065 0.41 +0.3
1,817,028 - A4249_RS09065 0.41 -0.2
1,817,438 + A4249_RS09070 0.12 -1.6
1,817,438 + A4249_RS09070 0.12 -0.3
1,817,438 + A4249_RS09070 0.12 +0.3
1,817,438 + A4249_RS09070 0.12 -0.3
1,817,438 + A4249_RS09070 0.12 -1.8
1,817,438 + A4249_RS09070 0.12 -0.7
1,817,439 - A4249_RS09070 0.12 +2.6
1,817,439 - A4249_RS09070 0.12 -1.0
1,817,561 + A4249_RS09070 0.20 +0.6
1,817,562 - A4249_RS09070 0.21 -0.4
1,817,562 - A4249_RS09070 0.21 -0.4
1,817,562 - A4249_RS09070 0.21 -1.2
1,817,595 + A4249_RS09070 0.23 -0.0
1,817,595 + A4249_RS09070 0.23 +0.1
1,817,595 + A4249_RS09070 0.23 -0.1
1,817,595 + A4249_RS09070 0.23 -1.4
1,817,595 + A4249_RS09070 0.23 -1.2
1,817,596 - A4249_RS09070 0.23 -0.3
1,817,596 - A4249_RS09070 0.23 +0.2
1,817,596 - A4249_RS09070 0.23 -0.2
1,817,633 + A4249_RS09070 0.26 +1.8
1,817,633 + A4249_RS09070 0.26 -1.1
1,817,634 - A4249_RS09070 0.26 +1.3
1,817,667 - A4249_RS09070 0.28 -0.2
1,817,667 - A4249_RS09070 0.28 -2.6
1,817,667 - A4249_RS09070 0.28 -1.9
1,817,667 - A4249_RS09070 0.28 +1.2
1,817,714 + A4249_RS09070 0.31 -0.5
1,817,785 - A4249_RS09070 0.36 +0.6
1,817,897 + A4249_RS09070 0.44 +0.2
1,817,897 + A4249_RS09070 0.44 -2.1
1,817,897 + A4249_RS09070 0.44 -0.8
1,817,897 + A4249_RS09070 0.44 +0.0
1,817,897 + A4249_RS09070 0.44 +1.8
1,817,897 + A4249_RS09070 0.44 -0.1
1,817,897 + A4249_RS09070 0.44 -1.5
1,817,897 + A4249_RS09070 0.44 -0.0
1,817,897 + A4249_RS09070 0.44 -1.3
1,817,897 + A4249_RS09070 0.44 -0.3
1,817,898 - A4249_RS09070 0.44 +0.1
1,817,898 - A4249_RS09070 0.44 +1.6
1,817,898 - A4249_RS09070 0.44 -1.6
1,817,898 - A4249_RS09070 0.44 -0.8
1,817,898 - A4249_RS09070 0.44 -0.5
1,817,898 - A4249_RS09070 0.44 -0.2
1,817,898 - A4249_RS09070 0.44 +2.8
1,817,898 - A4249_RS09070 0.44 +0.2
1,817,898 - A4249_RS09070 0.44 -0.7
1,817,898 - A4249_RS09070 0.44 +0.6
1,817,898 - A4249_RS09070 0.44 -1.2
1,817,898 - A4249_RS09070 0.44 +2.4
1,817,898 - A4249_RS09070 0.44 -0.9
1,817,898 - A4249_RS09070 0.44 +0.3
1,817,898 - A4249_RS09070 0.44 +1.6
1,817,953 - A4249_RS09070 0.48 +0.9
1,817,996 + A4249_RS09070 0.51 -2.3
1,817,996 + A4249_RS09070 0.51 +0.2
1,817,997 - A4249_RS09070 0.51 -0.3
1,817,997 - A4249_RS09070 0.51 +2.6
1,817,997 - A4249_RS09070 0.51 +2.2
1,817,997 - A4249_RS09070 0.51 -2.5

Or see this region's nucleotide sequence