Experiment: D-Glucose (C); 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS08635 and A4249_RS08640 are separated by 172 nucleotides A4249_RS08640 and A4249_RS08645 are separated by 91 nucleotides
A4249_RS08635: A4249_RS08635 - flagellar hook protein FlgE, at 1,734,613 to 1,736,370
_RS08635
A4249_RS08640: A4249_RS08640 - DUF1153 domain-containing protein, at 1,736,543 to 1,736,827
_RS08640
A4249_RS08645: A4249_RS08645 - tRNA 2-thiouridine(34) synthase MnmA, at 1,736,919 to 1,738,130
_RS08645
Position (kb)
1736
1737 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1735.657 kb on + strand, within A4249_RS08635 at 1735.658 kb on - strand, within A4249_RS08635 at 1735.709 kb on - strand, within A4249_RS08635 at 1735.709 kb on - strand, within A4249_RS08635 at 1735.774 kb on - strand, within A4249_RS08635 at 1736.155 kb on + strand, within A4249_RS08635 at 1736.156 kb on - strand, within A4249_RS08635 at 1736.156 kb on - strand, within A4249_RS08635 at 1736.156 kb on - strand, within A4249_RS08635 at 1736.299 kb on + strand at 1736.299 kb on + strand at 1736.299 kb on + strand at 1736.300 kb on - strand at 1736.379 kb on + strand at 1736.379 kb on + strand at 1736.379 kb on + strand at 1736.379 kb on + strand at 1736.380 kb on - strand at 1736.380 kb on - strand at 1736.383 kb on + strand at 1736.383 kb on + strand at 1736.384 kb on - strand at 1736.384 kb on - strand at 1736.384 kb on - strand at 1736.384 kb on - strand at 1736.390 kb on + strand at 1736.390 kb on + strand at 1736.422 kb on + strand at 1736.422 kb on + strand at 1736.451 kb on + strand at 1736.514 kb on + strand at 1736.514 kb on + strand at 1736.514 kb on + strand at 1736.514 kb on + strand at 1736.515 kb on - strand at 1736.536 kb on + strand at 1736.536 kb on + strand at 1736.537 kb on - strand at 1736.537 kb on - strand at 1736.566 kb on + strand at 1736.582 kb on + strand, within A4249_RS08640 at 1736.582 kb on + strand, within A4249_RS08640 at 1736.582 kb on + strand, within A4249_RS08640 at 1736.582 kb on + strand, within A4249_RS08640 at 1736.583 kb on - strand, within A4249_RS08640 at 1736.583 kb on - strand, within A4249_RS08640 at 1736.583 kb on - strand, within A4249_RS08640 at 1736.726 kb on + strand, within A4249_RS08640 at 1736.816 kb on + strand at 1736.846 kb on + strand at 1736.916 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 30C remove 1,735,657 + A4249_RS08635 0.59 -0.5 1,735,658 - A4249_RS08635 0.59 +1.2 1,735,709 - A4249_RS08635 0.62 -0.7 1,735,709 - A4249_RS08635 0.62 -1.3 1,735,774 - A4249_RS08635 0.66 +1.0 1,736,155 + A4249_RS08635 0.88 +1.4 1,736,156 - A4249_RS08635 0.88 +0.3 1,736,156 - A4249_RS08635 0.88 -1.3 1,736,156 - A4249_RS08635 0.88 -0.1 1,736,299 + +1.1 1,736,299 + -0.4 1,736,299 + +1.8 1,736,300 - +0.0 1,736,379 + +2.6 1,736,379 + -1.5 1,736,379 + +0.7 1,736,379 + +1.6 1,736,380 - -0.9 1,736,380 - +0.3 1,736,383 + -0.6 1,736,383 + -2.0 1,736,384 - +0.4 1,736,384 - -0.6 1,736,384 - +1.9 1,736,384 - -0.1 1,736,390 + -0.1 1,736,390 + +0.3 1,736,422 + +1.3 1,736,422 + +1.4 1,736,451 + -2.0 1,736,514 + +0.3 1,736,514 + -1.7 1,736,514 + -2.5 1,736,514 + +0.3 1,736,515 - +0.2 1,736,536 + +1.5 1,736,536 + -1.7 1,736,537 - +0.5 1,736,537 - +0.3 1,736,566 + -1.0 1,736,582 + A4249_RS08640 0.14 -1.3 1,736,582 + A4249_RS08640 0.14 -0.3 1,736,582 + A4249_RS08640 0.14 -1.0 1,736,582 + A4249_RS08640 0.14 -1.6 1,736,583 - A4249_RS08640 0.14 -2.9 1,736,583 - A4249_RS08640 0.14 -0.7 1,736,583 - A4249_RS08640 0.14 -2.0 1,736,726 + A4249_RS08640 0.64 -2.0 1,736,816 + +0.3 1,736,846 + +0.3 1,736,916 + +0.5
Or see this region's nucleotide sequence