Experiment: D-Glucose (C); 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS08525 and A4249_RS08530 are separated by 76 nucleotides A4249_RS08530 and A4249_RS08535 are separated by 179 nucleotides A4249_RS08535 and A4249_RS08540 are separated by 183 nucleotides
A4249_RS08525: A4249_RS08525 - glutamate--tRNA ligase, at 1,708,990 to 1,710,324
_RS08525
A4249_RS08530: A4249_RS08530 - RNA polymerase-binding protein DksA, at 1,710,401 to 1,710,835
_RS08530
A4249_RS08535: A4249_RS08535 - flagellar assembly protein FliX, at 1,711,015 to 1,711,440
_RS08535
A4249_RS08540: A4249_RS08540 - flagellar basal body P-ring protein FlgI, at 1,711,624 to 1,712,745
_RS08540
Position (kb)
1711
1712 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2
3
4 at 1710.395 kb on + strand at 1710.395 kb on + strand at 1710.395 kb on + strand at 1710.396 kb on - strand at 1710.523 kb on - strand, within A4249_RS08530 at 1710.528 kb on + strand, within A4249_RS08530 at 1710.529 kb on - strand, within A4249_RS08530 at 1710.529 kb on - strand, within A4249_RS08530 at 1710.744 kb on + strand, within A4249_RS08530 at 1710.744 kb on + strand, within A4249_RS08530 at 1710.744 kb on + strand, within A4249_RS08530 at 1710.745 kb on - strand, within A4249_RS08530 at 1710.745 kb on - strand, within A4249_RS08530 at 1710.745 kb on - strand, within A4249_RS08530 at 1710.852 kb on - strand at 1710.871 kb on + strand at 1710.871 kb on + strand at 1710.872 kb on - strand at 1710.881 kb on + strand at 1710.882 kb on - strand at 1710.882 kb on - strand at 1710.882 kb on - strand at 1710.882 kb on - strand at 1710.883 kb on + strand at 1710.883 kb on + strand at 1710.884 kb on - strand at 1710.884 kb on - strand at 1710.884 kb on - strand at 1710.884 kb on - strand at 1710.884 kb on - strand at 1710.884 kb on - strand at 1710.985 kb on - strand at 1711.006 kb on + strand at 1711.014 kb on - strand at 1711.389 kb on + strand, within A4249_RS08535 at 1711.389 kb on + strand, within A4249_RS08535 at 1711.564 kb on + strand at 1711.564 kb on + strand at 1711.565 kb on - strand at 1711.600 kb on + strand at 1711.600 kb on + strand at 1711.772 kb on - strand, within A4249_RS08540 at 1711.811 kb on + strand, within A4249_RS08540 at 1711.903 kb on - strand, within A4249_RS08540 at 1712.053 kb on + strand, within A4249_RS08540 at 1712.053 kb on + strand, within A4249_RS08540 at 1712.053 kb on + strand, within A4249_RS08540 at 1712.053 kb on + strand, within A4249_RS08540 at 1712.054 kb on - strand, within A4249_RS08540 at 1712.054 kb on - strand, within A4249_RS08540 at 1712.054 kb on - strand, within A4249_RS08540 at 1712.054 kb on - strand, within A4249_RS08540 at 1712.054 kb on - strand, within A4249_RS08540 at 1712.054 kb on - strand, within A4249_RS08540 at 1712.199 kb on + strand, within A4249_RS08540 at 1712.199 kb on + strand, within A4249_RS08540 at 1712.199 kb on + strand, within A4249_RS08540 at 1712.199 kb on + strand, within A4249_RS08540 at 1712.200 kb on - strand, within A4249_RS08540 at 1712.200 kb on - strand, within A4249_RS08540 at 1712.200 kb on - strand, within A4249_RS08540 at 1712.200 kb on - strand, within A4249_RS08540 at 1712.279 kb on - strand, within A4249_RS08540 at 1712.308 kb on - strand, within A4249_RS08540 at 1712.392 kb on - strand, within A4249_RS08540
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 30C remove 1,710,395 + +0.3 1,710,395 + -2.0 1,710,395 + -1.8 1,710,396 - -0.5 1,710,523 - A4249_RS08530 0.28 +0.3 1,710,528 + A4249_RS08530 0.29 -2.0 1,710,529 - A4249_RS08530 0.29 -0.7 1,710,529 - A4249_RS08530 0.29 -5.7 1,710,744 + A4249_RS08530 0.79 -2.9 1,710,744 + A4249_RS08530 0.79 -2.0 1,710,744 + A4249_RS08530 0.79 -1.3 1,710,745 - A4249_RS08530 0.79 -3.6 1,710,745 - A4249_RS08530 0.79 -4.1 1,710,745 - A4249_RS08530 0.79 -2.8 1,710,852 - -5.0 1,710,871 + -2.7 1,710,871 + -1.3 1,710,872 - -0.7 1,710,881 + -3.3 1,710,882 - -2.0 1,710,882 - -1.3 1,710,882 - -3.3 1,710,882 - -3.0 1,710,883 + -2.7 1,710,883 + +0.3 1,710,884 - -3.2 1,710,884 - -3.5 1,710,884 - -4.5 1,710,884 - -0.7 1,710,884 - -0.7 1,710,884 - -0.7 1,710,985 - +2.4 1,711,006 + +1.7 1,711,014 - +0.5 1,711,389 + A4249_RS08535 0.88 -0.0 1,711,389 + A4249_RS08535 0.88 -0.0 1,711,564 + -1.6 1,711,564 + +0.9 1,711,565 - +0.0 1,711,600 + +0.0 1,711,600 + +1.6 1,711,772 - A4249_RS08540 0.13 -1.7 1,711,811 + A4249_RS08540 0.17 +1.1 1,711,903 - A4249_RS08540 0.25 +0.1 1,712,053 + A4249_RS08540 0.38 +1.5 1,712,053 + A4249_RS08540 0.38 +0.4 1,712,053 + A4249_RS08540 0.38 -1.9 1,712,053 + A4249_RS08540 0.38 -0.6 1,712,054 - A4249_RS08540 0.38 +0.0 1,712,054 - A4249_RS08540 0.38 +1.0 1,712,054 - A4249_RS08540 0.38 +4.2 1,712,054 - A4249_RS08540 0.38 -0.5 1,712,054 - A4249_RS08540 0.38 +0.1 1,712,054 - A4249_RS08540 0.38 -0.7 1,712,199 + A4249_RS08540 0.51 -0.9 1,712,199 + A4249_RS08540 0.51 -0.8 1,712,199 + A4249_RS08540 0.51 +0.6 1,712,199 + A4249_RS08540 0.51 +1.2 1,712,200 - A4249_RS08540 0.51 +1.0 1,712,200 - A4249_RS08540 0.51 -1.0 1,712,200 - A4249_RS08540 0.51 +2.7 1,712,200 - A4249_RS08540 0.51 +1.6 1,712,279 - A4249_RS08540 0.58 -0.3 1,712,308 - A4249_RS08540 0.61 +0.0 1,712,392 - A4249_RS08540 0.68 +1.3
Or see this region's nucleotide sequence