Experiment: D-Glucose (C); 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS08455 and A4249_RS08460 are separated by 140 nucleotides A4249_RS08460 and A4249_RS08465 are separated by 134 nucleotides A4249_RS08465 and A4249_RS08470 are separated by 48 nucleotides A4249_RS08470 and A4249_RS08475 are separated by 44 nucleotides
A4249_RS08455: A4249_RS08455 - TolC family outer membrane protein, at 1,697,334 to 1,698,869
_RS08455
A4249_RS08460: A4249_RS08460 - protein-L-isoaspartate O-methyltransferase, at 1,699,010 to 1,699,639
_RS08460
A4249_RS08465: A4249_RS08465 - tRNA-Cys, at 1,699,774 to 1,699,847
_RS08465
A4249_RS08470: A4249_RS08470 - RNA methyltransferase, at 1,699,896 to 1,700,729
_RS08470
A4249_RS08475: A4249_RS08475 - tRNA-Asn, at 1,700,774 to 1,700,848
_RS08475
Position (kb)
1699
1700 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1698.921 kb on + strand at 1698.921 kb on + strand at 1698.921 kb on + strand at 1698.921 kb on + strand at 1698.922 kb on - strand at 1698.922 kb on - strand at 1698.922 kb on - strand at 1698.922 kb on - strand at 1698.952 kb on + strand at 1698.952 kb on + strand at 1698.953 kb on - strand at 1698.953 kb on - strand at 1698.953 kb on - strand at 1698.953 kb on - strand at 1699.011 kb on + strand at 1699.011 kb on + strand at 1699.012 kb on - strand at 1699.012 kb on - strand at 1699.012 kb on - strand at 1699.012 kb on - strand at 1699.012 kb on - strand at 1699.012 kb on - strand at 1699.012 kb on - strand at 1699.012 kb on - strand at 1699.643 kb on + strand at 1699.643 kb on + strand at 1699.644 kb on - strand at 1699.644 kb on - strand at 1699.644 kb on - strand at 1699.644 kb on - strand at 1699.687 kb on - strand at 1699.688 kb on + strand at 1699.688 kb on + strand at 1699.688 kb on + strand at 1699.688 kb on + strand at 1699.688 kb on + strand at 1699.688 kb on + strand at 1699.688 kb on + strand at 1699.689 kb on - strand at 1699.689 kb on - strand at 1699.689 kb on - strand at 1699.689 kb on - strand at 1699.689 kb on - strand at 1699.689 kb on - strand at 1699.689 kb on - strand at 1699.689 kb on - strand at 1699.689 kb on - strand at 1699.689 kb on - strand at 1699.689 kb on - strand at 1699.689 kb on - strand at 1699.986 kb on - strand, within A4249_RS08470 at 1699.986 kb on - strand, within A4249_RS08470 at 1700.081 kb on - strand, within A4249_RS08470 at 1700.081 kb on - strand, within A4249_RS08470 at 1700.228 kb on - strand, within A4249_RS08470 at 1700.228 kb on - strand, within A4249_RS08470 at 1700.228 kb on - strand, within A4249_RS08470 at 1700.473 kb on + strand, within A4249_RS08470 at 1700.473 kb on + strand, within A4249_RS08470 at 1700.473 kb on + strand, within A4249_RS08470 at 1700.473 kb on + strand, within A4249_RS08470 at 1700.473 kb on + strand, within A4249_RS08470 at 1700.474 kb on - strand, within A4249_RS08470 at 1700.474 kb on - strand, within A4249_RS08470 at 1700.474 kb on - strand, within A4249_RS08470 at 1700.474 kb on - strand, within A4249_RS08470 at 1700.474 kb on - strand, within A4249_RS08470 at 1700.474 kb on - strand, within A4249_RS08470 at 1700.474 kb on - strand, within A4249_RS08470 at 1700.474 kb on - strand, within A4249_RS08470 at 1700.474 kb on - strand, within A4249_RS08470 at 1700.659 kb on + strand at 1700.659 kb on + strand at 1700.693 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 30C remove 1,698,921 + +0.2 1,698,921 + -0.2 1,698,921 + +1.0 1,698,921 + -0.2 1,698,922 - +0.5 1,698,922 - +0.3 1,698,922 - +0.4 1,698,922 - -1.7 1,698,952 + +0.1 1,698,952 + -0.0 1,698,953 - +0.2 1,698,953 - -0.8 1,698,953 - +0.1 1,698,953 - +0.5 1,699,011 + +0.3 1,699,011 + -0.0 1,699,012 - +1.0 1,699,012 - -0.0 1,699,012 - +3.5 1,699,012 - -0.9 1,699,012 - -0.7 1,699,012 - +0.0 1,699,012 - +0.5 1,699,012 - +0.7 1,699,643 + -1.1 1,699,643 + -0.7 1,699,644 - +0.5 1,699,644 - +0.2 1,699,644 - +0.5 1,699,644 - -0.1 1,699,687 - +0.5 1,699,688 + +0.8 1,699,688 + +0.2 1,699,688 + +0.1 1,699,688 + -1.0 1,699,688 + +0.1 1,699,688 + +0.4 1,699,688 + -0.8 1,699,689 - +1.1 1,699,689 - +1.6 1,699,689 - +1.3 1,699,689 - +0.6 1,699,689 - +1.0 1,699,689 - +0.2 1,699,689 - +0.8 1,699,689 - +0.4 1,699,689 - -0.4 1,699,689 - +0.6 1,699,689 - +0.4 1,699,689 - -0.2 1,699,986 - A4249_RS08470 0.11 -0.4 1,699,986 - A4249_RS08470 0.11 +0.3 1,700,081 - A4249_RS08470 0.22 +0.9 1,700,081 - A4249_RS08470 0.22 +1.5 1,700,228 - A4249_RS08470 0.40 +1.2 1,700,228 - A4249_RS08470 0.40 +0.6 1,700,228 - A4249_RS08470 0.40 -1.1 1,700,473 + A4249_RS08470 0.69 -0.7 1,700,473 + A4249_RS08470 0.69 +0.3 1,700,473 + A4249_RS08470 0.69 +0.1 1,700,473 + A4249_RS08470 0.69 -2.2 1,700,473 + A4249_RS08470 0.69 +1.9 1,700,474 - A4249_RS08470 0.69 -1.0 1,700,474 - A4249_RS08470 0.69 +0.5 1,700,474 - A4249_RS08470 0.69 +1.7 1,700,474 - A4249_RS08470 0.69 -0.3 1,700,474 - A4249_RS08470 0.69 +1.7 1,700,474 - A4249_RS08470 0.69 +0.1 1,700,474 - A4249_RS08470 0.69 +1.6 1,700,474 - A4249_RS08470 0.69 -0.0 1,700,474 - A4249_RS08470 0.69 +0.1 1,700,659 + -0.6 1,700,659 + +1.3 1,700,693 + +0.1
Or see this region's nucleotide sequence