Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS08200

Experiment: D-Glucose (C); 30C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS08195 and A4249_RS08200 overlap by 1 nucleotidesA4249_RS08200 and A4249_RS08205 are separated by 167 nucleotides A4249_RS08195: A4249_RS08195 - RNA degradosome polyphosphate kinase, at 1,645,994 to 1,648,210 _RS08195 A4249_RS08200: A4249_RS08200 - Ppx/GppA phosphatase family protein, at 1,648,210 to 1,649,697 _RS08200 A4249_RS08205: A4249_RS08205 - ribonuclease D, at 1,649,865 to 1,651,013 _RS08205 Position (kb) 1648 1649 1650Strain fitness (log2 ratio) -2 -1 0 1at 1648.285 kb on + strandat 1648.318 kb on + strandat 1648.318 kb on + strandat 1648.318 kb on + strandat 1648.318 kb on + strandat 1648.318 kb on + strandat 1648.318 kb on + strandat 1648.318 kb on + strandat 1648.318 kb on + strandat 1648.319 kb on - strandat 1648.319 kb on - strandat 1648.319 kb on - strandat 1648.319 kb on - strandat 1648.319 kb on - strandat 1648.319 kb on - strandat 1648.319 kb on - strandat 1648.319 kb on - strandat 1648.319 kb on - strandat 1648.320 kb on + strandat 1648.321 kb on - strandat 1648.321 kb on - strandat 1648.321 kb on - strandat 1648.573 kb on + strand, within A4249_RS08200at 1648.573 kb on + strand, within A4249_RS08200at 1648.573 kb on + strand, within A4249_RS08200at 1648.574 kb on - strand, within A4249_RS08200at 1648.589 kb on + strand, within A4249_RS08200at 1648.589 kb on + strand, within A4249_RS08200at 1648.589 kb on + strand, within A4249_RS08200at 1648.590 kb on - strand, within A4249_RS08200at 1648.773 kb on + strand, within A4249_RS08200at 1648.774 kb on - strand, within A4249_RS08200at 1648.774 kb on - strand, within A4249_RS08200at 1648.774 kb on - strand, within A4249_RS08200at 1648.774 kb on - strand, within A4249_RS08200at 1648.811 kb on - strand, within A4249_RS08200at 1648.811 kb on - strand, within A4249_RS08200at 1648.892 kb on - strand, within A4249_RS08200at 1649.006 kb on - strand, within A4249_RS08200at 1649.006 kb on - strand, within A4249_RS08200at 1649.507 kb on + strand, within A4249_RS08200at 1649.507 kb on + strand, within A4249_RS08200at 1649.507 kb on + strand, within A4249_RS08200at 1649.507 kb on + strand, within A4249_RS08200at 1649.507 kb on + strand, within A4249_RS08200at 1649.507 kb on + strand, within A4249_RS08200at 1649.507 kb on + strand, within A4249_RS08200at 1649.507 kb on + strand, within A4249_RS08200at 1649.507 kb on + strand, within A4249_RS08200at 1649.507 kb on + strand, within A4249_RS08200at 1649.508 kb on - strand, within A4249_RS08200at 1649.508 kb on - strand, within A4249_RS08200at 1649.508 kb on - strand, within A4249_RS08200at 1649.508 kb on - strand, within A4249_RS08200at 1649.508 kb on - strand, within A4249_RS08200at 1649.508 kb on - strand, within A4249_RS08200at 1649.508 kb on - strand, within A4249_RS08200at 1649.511 kb on + strand, within A4249_RS08200at 1649.511 kb on + strand, within A4249_RS08200at 1649.511 kb on + strand, within A4249_RS08200at 1649.512 kb on - strand, within A4249_RS08200at 1649.614 kb on + strandat 1649.693 kb on + strandat 1649.693 kb on + strandat 1649.693 kb on + strandat 1649.693 kb on + strandat 1649.693 kb on + strandat 1649.693 kb on + strandat 1649.693 kb on + strandat 1649.693 kb on + strandat 1649.693 kb on + strandat 1649.693 kb on + strandat 1649.693 kb on + strandat 1649.693 kb on + strandat 1649.694 kb on - strandat 1649.694 kb on - strandat 1649.694 kb on - strandat 1649.694 kb on - strandat 1649.694 kb on - strandat 1649.694 kb on - strandat 1649.694 kb on - strandat 1649.694 kb on - strandat 1649.694 kb on - strandat 1649.694 kb on - strandat 1649.694 kb on - strandat 1649.694 kb on - strandat 1649.694 kb on - strandat 1649.694 kb on - strandat 1649.694 kb on - strandat 1649.694 kb on - strandat 1649.694 kb on - strandat 1649.695 kb on + strandat 1649.695 kb on + strandat 1649.695 kb on + strandat 1649.695 kb on + strandat 1649.695 kb on + strandat 1649.695 kb on + strandat 1649.695 kb on + strandat 1649.696 kb on - strandat 1649.696 kb on - strandat 1649.696 kb on - strandat 1649.696 kb on - strandat 1649.696 kb on - strandat 1649.696 kb on - strandat 1649.696 kb on - strandat 1649.696 kb on - strandat 1649.725 kb on + strandat 1649.725 kb on + strandat 1649.725 kb on + strandat 1649.725 kb on + strandat 1649.726 kb on - strandat 1649.726 kb on - strandat 1649.726 kb on - strandat 1649.726 kb on - strandat 1649.785 kb on + strandat 1649.785 kb on + strandat 1649.785 kb on + strandat 1649.785 kb on + strandat 1649.785 kb on + strandat 1649.785 kb on + strandat 1649.786 kb on - strandat 1649.786 kb on - strandat 1649.786 kb on - strandat 1649.786 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C); 30C
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1,648,285 + -1.1
1,648,318 + -1.3
1,648,318 + -1.0
1,648,318 + -1.3
1,648,318 + -0.9
1,648,318 + -1.3
1,648,318 + -1.3
1,648,318 + -0.9
1,648,318 + -1.3
1,648,319 - -1.3
1,648,319 - -1.6
1,648,319 - -0.9
1,648,319 - -0.9
1,648,319 - -1.4
1,648,319 - -1.2
1,648,319 - -0.9
1,648,319 - -1.0
1,648,319 - -1.2
1,648,320 + -0.9
1,648,321 - -1.1
1,648,321 - -1.2
1,648,321 - -0.7
1,648,573 + A4249_RS08200 0.24 -1.3
1,648,573 + A4249_RS08200 0.24 -0.9
1,648,573 + A4249_RS08200 0.24 -1.0
1,648,574 - A4249_RS08200 0.24 -0.8
1,648,589 + A4249_RS08200 0.25 -0.9
1,648,589 + A4249_RS08200 0.25 -0.8
1,648,589 + A4249_RS08200 0.25 -0.7
1,648,590 - A4249_RS08200 0.26 -1.1
1,648,773 + A4249_RS08200 0.38 -1.3
1,648,774 - A4249_RS08200 0.38 -0.6
1,648,774 - A4249_RS08200 0.38 -1.5
1,648,774 - A4249_RS08200 0.38 -1.1
1,648,774 - A4249_RS08200 0.38 -0.6
1,648,811 - A4249_RS08200 0.40 -1.1
1,648,811 - A4249_RS08200 0.40 -0.1
1,648,892 - A4249_RS08200 0.46 -1.5
1,649,006 - A4249_RS08200 0.53 +1.2
1,649,006 - A4249_RS08200 0.53 -0.2
1,649,507 + A4249_RS08200 0.87 -1.0
1,649,507 + A4249_RS08200 0.87 -0.6
1,649,507 + A4249_RS08200 0.87 -0.4
1,649,507 + A4249_RS08200 0.87 -1.1
1,649,507 + A4249_RS08200 0.87 -1.3
1,649,507 + A4249_RS08200 0.87 -0.9
1,649,507 + A4249_RS08200 0.87 -0.7
1,649,507 + A4249_RS08200 0.87 -0.5
1,649,507 + A4249_RS08200 0.87 -0.9
1,649,507 + A4249_RS08200 0.87 -0.7
1,649,508 - A4249_RS08200 0.87 -0.9
1,649,508 - A4249_RS08200 0.87 -0.9
1,649,508 - A4249_RS08200 0.87 -0.9
1,649,508 - A4249_RS08200 0.87 -1.3
1,649,508 - A4249_RS08200 0.87 -0.9
1,649,508 - A4249_RS08200 0.87 -1.1
1,649,508 - A4249_RS08200 0.87 -0.3
1,649,511 + A4249_RS08200 0.87 -0.9
1,649,511 + A4249_RS08200 0.87 -1.1
1,649,511 + A4249_RS08200 0.87 -0.7
1,649,512 - A4249_RS08200 0.88 -0.7
1,649,614 + -0.7
1,649,693 + -0.7
1,649,693 + +0.3
1,649,693 + +0.6
1,649,693 + -0.1
1,649,693 + +1.7
1,649,693 + +0.3
1,649,693 + +0.5
1,649,693 + +1.0
1,649,693 + -2.4
1,649,693 + -0.1
1,649,693 + +0.4
1,649,693 + +1.2
1,649,694 - -0.4
1,649,694 - -0.6
1,649,694 - +1.7
1,649,694 - -1.0
1,649,694 - -1.2
1,649,694 - -0.8
1,649,694 - -0.5
1,649,694 - -0.6
1,649,694 - -0.9
1,649,694 - -0.7
1,649,694 - -0.8
1,649,694 - -2.0
1,649,694 - -1.1
1,649,694 - -0.2
1,649,694 - -1.3
1,649,694 - -2.2
1,649,694 - -0.2
1,649,695 + -1.1
1,649,695 + -0.8
1,649,695 + +1.0
1,649,695 + +1.3
1,649,695 + +0.1
1,649,695 + +0.3
1,649,695 + +0.8
1,649,696 - +1.3
1,649,696 - +0.9
1,649,696 - -0.6
1,649,696 - +1.0
1,649,696 - -0.1
1,649,696 - +0.4
1,649,696 - +0.3
1,649,696 - +0.2
1,649,725 + -0.0
1,649,725 + -0.1
1,649,725 + -0.6
1,649,725 + -2.3
1,649,726 - +0.2
1,649,726 - +1.0
1,649,726 - +1.6
1,649,726 - +0.2
1,649,785 + -0.7
1,649,785 + -0.7
1,649,785 + +1.0
1,649,785 + +0.0
1,649,785 + +0.8
1,649,785 + +0.4
1,649,786 - +0.4
1,649,786 - +0.7
1,649,786 - +0.5
1,649,786 - +0.1

Or see this region's nucleotide sequence