Experiment: D-Glucose (C); 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS08195 and A4249_RS08200 overlap by 1 nucleotides A4249_RS08200 and A4249_RS08205 are separated by 167 nucleotides
A4249_RS08195: A4249_RS08195 - RNA degradosome polyphosphate kinase, at 1,645,994 to 1,648,210
_RS08195
A4249_RS08200: A4249_RS08200 - Ppx/GppA phosphatase family protein, at 1,648,210 to 1,649,697
_RS08200
A4249_RS08205: A4249_RS08205 - ribonuclease D, at 1,649,865 to 1,651,013
_RS08205
Position (kb)
1648
1649
1650 Strain fitness (log2 ratio)
-2
-1
0
1 at 1648.285 kb on + strand at 1648.318 kb on + strand at 1648.318 kb on + strand at 1648.318 kb on + strand at 1648.318 kb on + strand at 1648.318 kb on + strand at 1648.318 kb on + strand at 1648.318 kb on + strand at 1648.318 kb on + strand at 1648.319 kb on - strand at 1648.319 kb on - strand at 1648.319 kb on - strand at 1648.319 kb on - strand at 1648.319 kb on - strand at 1648.319 kb on - strand at 1648.319 kb on - strand at 1648.319 kb on - strand at 1648.319 kb on - strand at 1648.320 kb on + strand at 1648.321 kb on - strand at 1648.321 kb on - strand at 1648.321 kb on - strand at 1648.573 kb on + strand, within A4249_RS08200 at 1648.573 kb on + strand, within A4249_RS08200 at 1648.573 kb on + strand, within A4249_RS08200 at 1648.574 kb on - strand, within A4249_RS08200 at 1648.589 kb on + strand, within A4249_RS08200 at 1648.589 kb on + strand, within A4249_RS08200 at 1648.589 kb on + strand, within A4249_RS08200 at 1648.590 kb on - strand, within A4249_RS08200 at 1648.773 kb on + strand, within A4249_RS08200 at 1648.774 kb on - strand, within A4249_RS08200 at 1648.774 kb on - strand, within A4249_RS08200 at 1648.774 kb on - strand, within A4249_RS08200 at 1648.774 kb on - strand, within A4249_RS08200 at 1648.811 kb on - strand, within A4249_RS08200 at 1648.811 kb on - strand, within A4249_RS08200 at 1648.892 kb on - strand, within A4249_RS08200 at 1649.006 kb on - strand, within A4249_RS08200 at 1649.006 kb on - strand, within A4249_RS08200 at 1649.507 kb on + strand, within A4249_RS08200 at 1649.507 kb on + strand, within A4249_RS08200 at 1649.507 kb on + strand, within A4249_RS08200 at 1649.507 kb on + strand, within A4249_RS08200 at 1649.507 kb on + strand, within A4249_RS08200 at 1649.507 kb on + strand, within A4249_RS08200 at 1649.507 kb on + strand, within A4249_RS08200 at 1649.507 kb on + strand, within A4249_RS08200 at 1649.507 kb on + strand, within A4249_RS08200 at 1649.507 kb on + strand, within A4249_RS08200 at 1649.508 kb on - strand, within A4249_RS08200 at 1649.508 kb on - strand, within A4249_RS08200 at 1649.508 kb on - strand, within A4249_RS08200 at 1649.508 kb on - strand, within A4249_RS08200 at 1649.508 kb on - strand, within A4249_RS08200 at 1649.508 kb on - strand, within A4249_RS08200 at 1649.508 kb on - strand, within A4249_RS08200 at 1649.511 kb on + strand, within A4249_RS08200 at 1649.511 kb on + strand, within A4249_RS08200 at 1649.511 kb on + strand, within A4249_RS08200 at 1649.512 kb on - strand, within A4249_RS08200 at 1649.614 kb on + strand at 1649.693 kb on + strand at 1649.693 kb on + strand at 1649.693 kb on + strand at 1649.693 kb on + strand at 1649.693 kb on + strand at 1649.693 kb on + strand at 1649.693 kb on + strand at 1649.693 kb on + strand at 1649.693 kb on + strand at 1649.693 kb on + strand at 1649.693 kb on + strand at 1649.693 kb on + strand at 1649.694 kb on - strand at 1649.694 kb on - strand at 1649.694 kb on - strand at 1649.694 kb on - strand at 1649.694 kb on - strand at 1649.694 kb on - strand at 1649.694 kb on - strand at 1649.694 kb on - strand at 1649.694 kb on - strand at 1649.694 kb on - strand at 1649.694 kb on - strand at 1649.694 kb on - strand at 1649.694 kb on - strand at 1649.694 kb on - strand at 1649.694 kb on - strand at 1649.694 kb on - strand at 1649.694 kb on - strand at 1649.695 kb on + strand at 1649.695 kb on + strand at 1649.695 kb on + strand at 1649.695 kb on + strand at 1649.695 kb on + strand at 1649.695 kb on + strand at 1649.695 kb on + strand at 1649.696 kb on - strand at 1649.696 kb on - strand at 1649.696 kb on - strand at 1649.696 kb on - strand at 1649.696 kb on - strand at 1649.696 kb on - strand at 1649.696 kb on - strand at 1649.696 kb on - strand at 1649.725 kb on + strand at 1649.725 kb on + strand at 1649.725 kb on + strand at 1649.725 kb on + strand at 1649.726 kb on - strand at 1649.726 kb on - strand at 1649.726 kb on - strand at 1649.726 kb on - strand at 1649.785 kb on + strand at 1649.785 kb on + strand at 1649.785 kb on + strand at 1649.785 kb on + strand at 1649.785 kb on + strand at 1649.785 kb on + strand at 1649.786 kb on - strand at 1649.786 kb on - strand at 1649.786 kb on - strand at 1649.786 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 30C remove 1,648,285 + -1.1 1,648,318 + -1.3 1,648,318 + -1.0 1,648,318 + -1.3 1,648,318 + -0.9 1,648,318 + -1.3 1,648,318 + -1.3 1,648,318 + -0.9 1,648,318 + -1.3 1,648,319 - -1.3 1,648,319 - -1.6 1,648,319 - -0.9 1,648,319 - -0.9 1,648,319 - -1.4 1,648,319 - -1.2 1,648,319 - -0.9 1,648,319 - -1.0 1,648,319 - -1.2 1,648,320 + -0.9 1,648,321 - -1.1 1,648,321 - -1.2 1,648,321 - -0.7 1,648,573 + A4249_RS08200 0.24 -1.3 1,648,573 + A4249_RS08200 0.24 -0.9 1,648,573 + A4249_RS08200 0.24 -1.0 1,648,574 - A4249_RS08200 0.24 -0.8 1,648,589 + A4249_RS08200 0.25 -0.9 1,648,589 + A4249_RS08200 0.25 -0.8 1,648,589 + A4249_RS08200 0.25 -0.7 1,648,590 - A4249_RS08200 0.26 -1.1 1,648,773 + A4249_RS08200 0.38 -1.3 1,648,774 - A4249_RS08200 0.38 -0.6 1,648,774 - A4249_RS08200 0.38 -1.5 1,648,774 - A4249_RS08200 0.38 -1.1 1,648,774 - A4249_RS08200 0.38 -0.6 1,648,811 - A4249_RS08200 0.40 -1.1 1,648,811 - A4249_RS08200 0.40 -0.1 1,648,892 - A4249_RS08200 0.46 -1.5 1,649,006 - A4249_RS08200 0.53 +1.2 1,649,006 - A4249_RS08200 0.53 -0.2 1,649,507 + A4249_RS08200 0.87 -1.0 1,649,507 + A4249_RS08200 0.87 -0.6 1,649,507 + A4249_RS08200 0.87 -0.4 1,649,507 + A4249_RS08200 0.87 -1.1 1,649,507 + A4249_RS08200 0.87 -1.3 1,649,507 + A4249_RS08200 0.87 -0.9 1,649,507 + A4249_RS08200 0.87 -0.7 1,649,507 + A4249_RS08200 0.87 -0.5 1,649,507 + A4249_RS08200 0.87 -0.9 1,649,507 + A4249_RS08200 0.87 -0.7 1,649,508 - A4249_RS08200 0.87 -0.9 1,649,508 - A4249_RS08200 0.87 -0.9 1,649,508 - A4249_RS08200 0.87 -0.9 1,649,508 - A4249_RS08200 0.87 -1.3 1,649,508 - A4249_RS08200 0.87 -0.9 1,649,508 - A4249_RS08200 0.87 -1.1 1,649,508 - A4249_RS08200 0.87 -0.3 1,649,511 + A4249_RS08200 0.87 -0.9 1,649,511 + A4249_RS08200 0.87 -1.1 1,649,511 + A4249_RS08200 0.87 -0.7 1,649,512 - A4249_RS08200 0.88 -0.7 1,649,614 + -0.7 1,649,693 + -0.7 1,649,693 + +0.3 1,649,693 + +0.6 1,649,693 + -0.1 1,649,693 + +1.7 1,649,693 + +0.3 1,649,693 + +0.5 1,649,693 + +1.0 1,649,693 + -2.4 1,649,693 + -0.1 1,649,693 + +0.4 1,649,693 + +1.2 1,649,694 - -0.4 1,649,694 - -0.6 1,649,694 - +1.7 1,649,694 - -1.0 1,649,694 - -1.2 1,649,694 - -0.8 1,649,694 - -0.5 1,649,694 - -0.6 1,649,694 - -0.9 1,649,694 - -0.7 1,649,694 - -0.8 1,649,694 - -2.0 1,649,694 - -1.1 1,649,694 - -0.2 1,649,694 - -1.3 1,649,694 - -2.2 1,649,694 - -0.2 1,649,695 + -1.1 1,649,695 + -0.8 1,649,695 + +1.0 1,649,695 + +1.3 1,649,695 + +0.1 1,649,695 + +0.3 1,649,695 + +0.8 1,649,696 - +1.3 1,649,696 - +0.9 1,649,696 - -0.6 1,649,696 - +1.0 1,649,696 - -0.1 1,649,696 - +0.4 1,649,696 - +0.3 1,649,696 - +0.2 1,649,725 + -0.0 1,649,725 + -0.1 1,649,725 + -0.6 1,649,725 + -2.3 1,649,726 - +0.2 1,649,726 - +1.0 1,649,726 - +1.6 1,649,726 - +0.2 1,649,785 + -0.7 1,649,785 + -0.7 1,649,785 + +1.0 1,649,785 + +0.0 1,649,785 + +0.8 1,649,785 + +0.4 1,649,786 - +0.4 1,649,786 - +0.7 1,649,786 - +0.5 1,649,786 - +0.1
Or see this region's nucleotide sequence