Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS07970

Experiment: D-Glucose (C); 30C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS07965 and A4249_RS07970 are separated by 158 nucleotidesA4249_RS07970 and A4249_RS07975 are separated by 125 nucleotides A4249_RS07965: A4249_RS07965 - long-chain-fatty-acid--CoA ligase, at 1,595,651 to 1,597,279 _RS07965 A4249_RS07970: A4249_RS07970 - uridine kinase, at 1,597,438 to 1,598,085 _RS07970 A4249_RS07975: A4249_RS07975 - thiazole synthase, at 1,598,211 to 1,598,993 _RS07975 Position (kb) 1597 1598 1599Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 1596.498 kb on + strand, within A4249_RS07965at 1596.498 kb on + strand, within A4249_RS07965at 1596.498 kb on + strand, within A4249_RS07965at 1596.498 kb on + strand, within A4249_RS07965at 1596.498 kb on + strand, within A4249_RS07965at 1596.498 kb on + strand, within A4249_RS07965at 1596.498 kb on + strand, within A4249_RS07965at 1596.499 kb on - strand, within A4249_RS07965at 1596.499 kb on - strand, within A4249_RS07965at 1596.499 kb on - strand, within A4249_RS07965at 1596.499 kb on - strand, within A4249_RS07965at 1596.499 kb on - strand, within A4249_RS07965at 1596.499 kb on - strand, within A4249_RS07965at 1596.499 kb on - strand, within A4249_RS07965at 1596.499 kb on - strand, within A4249_RS07965at 1596.499 kb on - strand, within A4249_RS07965at 1596.499 kb on - strand, within A4249_RS07965at 1596.690 kb on + strand, within A4249_RS07965at 1596.690 kb on + strand, within A4249_RS07965at 1596.691 kb on - strand, within A4249_RS07965at 1596.691 kb on - strand, within A4249_RS07965at 1596.691 kb on - strand, within A4249_RS07965at 1596.729 kb on + strand, within A4249_RS07965at 1596.729 kb on + strand, within A4249_RS07965at 1596.729 kb on + strand, within A4249_RS07965at 1596.729 kb on + strand, within A4249_RS07965at 1596.729 kb on + strand, within A4249_RS07965at 1596.729 kb on + strand, within A4249_RS07965at 1596.730 kb on - strand, within A4249_RS07965at 1596.730 kb on - strand, within A4249_RS07965at 1596.730 kb on - strand, within A4249_RS07965at 1596.730 kb on - strand, within A4249_RS07965at 1596.807 kb on + strand, within A4249_RS07965at 1596.807 kb on + strand, within A4249_RS07965at 1596.807 kb on + strand, within A4249_RS07965at 1596.808 kb on - strand, within A4249_RS07965at 1596.808 kb on - strand, within A4249_RS07965at 1596.808 kb on - strand, within A4249_RS07965at 1596.808 kb on - strand, within A4249_RS07965at 1596.841 kb on + strand, within A4249_RS07965at 1596.842 kb on - strand, within A4249_RS07965at 1596.842 kb on - strand, within A4249_RS07965at 1596.859 kb on + strand, within A4249_RS07965at 1596.859 kb on + strand, within A4249_RS07965at 1596.859 kb on + strand, within A4249_RS07965at 1596.886 kb on + strand, within A4249_RS07965at 1596.886 kb on + strand, within A4249_RS07965at 1596.886 kb on + strand, within A4249_RS07965at 1596.887 kb on - strand, within A4249_RS07965at 1596.887 kb on - strand, within A4249_RS07965at 1596.966 kb on + strand, within A4249_RS07965at 1596.966 kb on + strand, within A4249_RS07965at 1596.967 kb on - strand, within A4249_RS07965at 1596.967 kb on - strand, within A4249_RS07965at 1596.967 kb on - strand, within A4249_RS07965at 1596.967 kb on - strand, within A4249_RS07965at 1596.967 kb on - strand, within A4249_RS07965at 1597.035 kb on + strand, within A4249_RS07965at 1597.036 kb on - strand, within A4249_RS07965at 1597.048 kb on + strand, within A4249_RS07965at 1597.049 kb on - strand, within A4249_RS07965at 1597.049 kb on - strand, within A4249_RS07965at 1597.049 kb on - strand, within A4249_RS07965at 1597.060 kb on + strand, within A4249_RS07965at 1597.155 kb on + strandat 1597.155 kb on + strandat 1597.155 kb on + strandat 1597.155 kb on + strandat 1597.156 kb on - strandat 1597.156 kb on - strandat 1597.284 kb on + strandat 1597.284 kb on + strandat 1597.284 kb on + strandat 1597.285 kb on - strandat 1597.335 kb on + strandat 1597.335 kb on + strandat 1597.336 kb on - strandat 1597.425 kb on + strandat 1597.425 kb on + strandat 1597.425 kb on + strandat 1597.426 kb on - strandat 1597.445 kb on + strandat 1597.445 kb on + strandat 1597.445 kb on + strandat 1597.446 kb on - strandat 1597.446 kb on - strandat 1597.446 kb on - strandat 1597.446 kb on - strandat 1597.446 kb on - strandat 1597.446 kb on - strandat 1597.446 kb on - strandat 1597.552 kb on + strand, within A4249_RS07970at 1597.552 kb on + strand, within A4249_RS07970at 1597.552 kb on + strand, within A4249_RS07970at 1597.552 kb on + strand, within A4249_RS07970at 1597.552 kb on + strand, within A4249_RS07970at 1597.552 kb on + strand, within A4249_RS07970at 1597.552 kb on + strand, within A4249_RS07970at 1597.552 kb on + strand, within A4249_RS07970at 1597.552 kb on + strand, within A4249_RS07970at 1597.552 kb on + strand, within A4249_RS07970at 1597.552 kb on + strand, within A4249_RS07970at 1597.552 kb on + strand, within A4249_RS07970at 1597.552 kb on + strand, within A4249_RS07970at 1597.552 kb on + strand, within A4249_RS07970at 1597.552 kb on + strand, within A4249_RS07970at 1597.552 kb on + strand, within A4249_RS07970at 1597.553 kb on - strand, within A4249_RS07970at 1597.553 kb on - strand, within A4249_RS07970at 1597.553 kb on - strand, within A4249_RS07970at 1597.553 kb on - strand, within A4249_RS07970at 1597.553 kb on - strand, within A4249_RS07970at 1597.553 kb on - strand, within A4249_RS07970at 1597.553 kb on - strand, within A4249_RS07970at 1597.555 kb on + strand, within A4249_RS07970at 1597.555 kb on + strand, within A4249_RS07970at 1597.555 kb on + strand, within A4249_RS07970at 1597.555 kb on + strand, within A4249_RS07970at 1597.556 kb on - strand, within A4249_RS07970at 1597.556 kb on - strand, within A4249_RS07970at 1597.556 kb on - strand, within A4249_RS07970at 1597.556 kb on - strand, within A4249_RS07970at 1597.556 kb on - strand, within A4249_RS07970at 1597.556 kb on - strand, within A4249_RS07970at 1597.556 kb on - strand, within A4249_RS07970at 1597.556 kb on - strand, within A4249_RS07970at 1597.556 kb on - strand, within A4249_RS07970at 1597.557 kb on + strand, within A4249_RS07970at 1597.557 kb on + strand, within A4249_RS07970at 1597.557 kb on + strand, within A4249_RS07970at 1597.557 kb on + strand, within A4249_RS07970at 1597.557 kb on + strand, within A4249_RS07970at 1597.557 kb on + strand, within A4249_RS07970at 1597.557 kb on + strand, within A4249_RS07970at 1597.557 kb on + strand, within A4249_RS07970at 1597.557 kb on + strand, within A4249_RS07970at 1597.557 kb on + strand, within A4249_RS07970at 1597.557 kb on + strand, within A4249_RS07970at 1597.558 kb on - strand, within A4249_RS07970at 1597.558 kb on - strand, within A4249_RS07970at 1597.558 kb on - strand, within A4249_RS07970at 1597.558 kb on - strand, within A4249_RS07970at 1597.558 kb on - strand, within A4249_RS07970at 1597.558 kb on - strand, within A4249_RS07970at 1597.558 kb on - strand, within A4249_RS07970at 1597.558 kb on - strand, within A4249_RS07970at 1597.690 kb on + strand, within A4249_RS07970at 1597.690 kb on + strand, within A4249_RS07970at 1597.690 kb on + strand, within A4249_RS07970at 1597.690 kb on + strand, within A4249_RS07970at 1597.690 kb on + strand, within A4249_RS07970at 1597.690 kb on + strand, within A4249_RS07970at 1597.690 kb on + strand, within A4249_RS07970at 1597.691 kb on - strand, within A4249_RS07970at 1597.691 kb on - strand, within A4249_RS07970at 1597.691 kb on - strand, within A4249_RS07970at 1597.691 kb on - strand, within A4249_RS07970at 1597.691 kb on - strand, within A4249_RS07970at 1597.909 kb on + strand, within A4249_RS07970at 1597.910 kb on - strand, within A4249_RS07970at 1597.910 kb on - strand, within A4249_RS07970at 1598.083 kb on + strandat 1598.084 kb on - strandat 1598.095 kb on + strandat 1598.095 kb on + strandat 1598.095 kb on + strandat 1598.095 kb on + strandat 1598.095 kb on + strandat 1598.095 kb on + strandat 1598.095 kb on + strandat 1598.095 kb on + strandat 1598.095 kb on + strandat 1598.095 kb on + strandat 1598.095 kb on + strandat 1598.095 kb on + strandat 1598.095 kb on + strandat 1598.095 kb on + strandat 1598.095 kb on + strandat 1598.095 kb on + strandat 1598.096 kb on - strandat 1598.096 kb on - strandat 1598.096 kb on - strandat 1598.096 kb on - strandat 1598.096 kb on - strandat 1598.096 kb on - strandat 1598.096 kb on - strandat 1598.096 kb on - strandat 1598.096 kb on - strandat 1598.096 kb on - strandat 1598.096 kb on - strandat 1598.096 kb on - strandat 1598.096 kb on - strandat 1598.096 kb on - strandat 1598.096 kb on - strandat 1598.114 kb on + strandat 1598.114 kb on + strandat 1598.114 kb on + strandat 1598.114 kb on + strandat 1598.114 kb on + strandat 1598.114 kb on + strandat 1598.114 kb on + strandat 1598.115 kb on - strandat 1598.115 kb on - strandat 1598.115 kb on - strandat 1598.115 kb on - strandat 1598.115 kb on - strandat 1598.115 kb on - strandat 1598.115 kb on - strandat 1598.115 kb on - strandat 1598.115 kb on - strandat 1598.115 kb on - strandat 1598.115 kb on - strandat 1598.115 kb on - strandat 1598.115 kb on - strandat 1598.115 kb on - strandat 1598.118 kb on + strandat 1598.119 kb on - strandat 1598.119 kb on - strandat 1598.119 kb on - strandat 1598.119 kb on - strandat 1598.119 kb on - strandat 1598.183 kb on + strandat 1598.183 kb on + strandat 1598.183 kb on + strandat 1598.183 kb on + strandat 1598.184 kb on - strandat 1598.184 kb on - strandat 1598.184 kb on - strandat 1598.212 kb on + strandat 1598.212 kb on + strandat 1598.212 kb on + strandat 1598.212 kb on + strandat 1598.213 kb on - strandat 1598.213 kb on - strandat 1598.213 kb on - strandat 1598.213 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C); 30C
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1,596,498 + A4249_RS07965 0.52 +0.3
1,596,498 + A4249_RS07965 0.52 -0.4
1,596,498 + A4249_RS07965 0.52 -0.5
1,596,498 + A4249_RS07965 0.52 -1.3
1,596,498 + A4249_RS07965 0.52 +2.1
1,596,498 + A4249_RS07965 0.52 -0.2
1,596,498 + A4249_RS07965 0.52 +0.8
1,596,499 - A4249_RS07965 0.52 +0.3
1,596,499 - A4249_RS07965 0.52 -1.5
1,596,499 - A4249_RS07965 0.52 +1.9
1,596,499 - A4249_RS07965 0.52 -0.5
1,596,499 - A4249_RS07965 0.52 +0.2
1,596,499 - A4249_RS07965 0.52 +0.6
1,596,499 - A4249_RS07965 0.52 -1.1
1,596,499 - A4249_RS07965 0.52 +0.5
1,596,499 - A4249_RS07965 0.52 -1.3
1,596,499 - A4249_RS07965 0.52 -0.3
1,596,690 + A4249_RS07965 0.64 -0.3
1,596,690 + A4249_RS07965 0.64 -0.0
1,596,691 - A4249_RS07965 0.64 +0.1
1,596,691 - A4249_RS07965 0.64 +0.4
1,596,691 - A4249_RS07965 0.64 -0.1
1,596,729 + A4249_RS07965 0.66 -0.3
1,596,729 + A4249_RS07965 0.66 +0.7
1,596,729 + A4249_RS07965 0.66 +0.1
1,596,729 + A4249_RS07965 0.66 +0.1
1,596,729 + A4249_RS07965 0.66 -0.7
1,596,729 + A4249_RS07965 0.66 -0.3
1,596,730 - A4249_RS07965 0.66 -0.6
1,596,730 - A4249_RS07965 0.66 +0.3
1,596,730 - A4249_RS07965 0.66 +1.1
1,596,730 - A4249_RS07965 0.66 +1.0
1,596,807 + A4249_RS07965 0.71 +0.0
1,596,807 + A4249_RS07965 0.71 -1.3
1,596,807 + A4249_RS07965 0.71 -0.0
1,596,808 - A4249_RS07965 0.71 +0.3
1,596,808 - A4249_RS07965 0.71 -0.0
1,596,808 - A4249_RS07965 0.71 -0.9
1,596,808 - A4249_RS07965 0.71 +0.5
1,596,841 + A4249_RS07965 0.73 +1.6
1,596,842 - A4249_RS07965 0.73 +0.8
1,596,842 - A4249_RS07965 0.73 -0.5
1,596,859 + A4249_RS07965 0.74 +0.9
1,596,859 + A4249_RS07965 0.74 +0.4
1,596,859 + A4249_RS07965 0.74 -0.9
1,596,886 + A4249_RS07965 0.76 -0.2
1,596,886 + A4249_RS07965 0.76 -0.5
1,596,886 + A4249_RS07965 0.76 -1.2
1,596,887 - A4249_RS07965 0.76 -0.0
1,596,887 - A4249_RS07965 0.76 -0.0
1,596,966 + A4249_RS07965 0.81 +0.7
1,596,966 + A4249_RS07965 0.81 -0.1
1,596,967 - A4249_RS07965 0.81 +0.6
1,596,967 - A4249_RS07965 0.81 -1.5
1,596,967 - A4249_RS07965 0.81 -0.5
1,596,967 - A4249_RS07965 0.81 +0.1
1,596,967 - A4249_RS07965 0.81 -0.7
1,597,035 + A4249_RS07965 0.85 -1.2
1,597,036 - A4249_RS07965 0.85 +1.0
1,597,048 + A4249_RS07965 0.86 -0.4
1,597,049 - A4249_RS07965 0.86 -0.5
1,597,049 - A4249_RS07965 0.86 +1.3
1,597,049 - A4249_RS07965 0.86 +0.9
1,597,060 + A4249_RS07965 0.86 -0.5
1,597,155 + -1.2
1,597,155 + -1.3
1,597,155 + +0.9
1,597,155 + +0.2
1,597,156 - -0.3
1,597,156 - -2.5
1,597,284 + +0.0
1,597,284 + +1.3
1,597,284 + -0.3
1,597,285 - +1.2
1,597,335 + +1.1
1,597,335 + -0.7
1,597,336 - +1.1
1,597,425 + -1.4
1,597,425 + +0.6
1,597,425 + +0.3
1,597,426 - -0.2
1,597,445 + +1.9
1,597,445 + +1.1
1,597,445 + +2.3
1,597,446 - -1.3
1,597,446 - +1.3
1,597,446 - +0.3
1,597,446 - +0.1
1,597,446 - +0.5
1,597,446 - -2.2
1,597,446 - +0.9
1,597,552 + A4249_RS07970 0.18 +0.1
1,597,552 + A4249_RS07970 0.18 +0.6
1,597,552 + A4249_RS07970 0.18 +1.1
1,597,552 + A4249_RS07970 0.18 -0.2
1,597,552 + A4249_RS07970 0.18 -3.3
1,597,552 + A4249_RS07970 0.18 -1.0
1,597,552 + A4249_RS07970 0.18 -0.9
1,597,552 + A4249_RS07970 0.18 -2.3
1,597,552 + A4249_RS07970 0.18 +0.0
1,597,552 + A4249_RS07970 0.18 +0.3
1,597,552 + A4249_RS07970 0.18 +0.3
1,597,552 + A4249_RS07970 0.18 -0.2
1,597,552 + A4249_RS07970 0.18 +2.3
1,597,552 + A4249_RS07970 0.18 -0.7
1,597,552 + A4249_RS07970 0.18 +1.5
1,597,552 + A4249_RS07970 0.18 -1.5
1,597,553 - A4249_RS07970 0.18 +0.3
1,597,553 - A4249_RS07970 0.18 +0.3
1,597,553 - A4249_RS07970 0.18 +1.7
1,597,553 - A4249_RS07970 0.18 -0.7
1,597,553 - A4249_RS07970 0.18 -0.7
1,597,553 - A4249_RS07970 0.18 +1.3
1,597,553 - A4249_RS07970 0.18 -0.7
1,597,555 + A4249_RS07970 0.18 -0.4
1,597,555 + A4249_RS07970 0.18 -0.3
1,597,555 + A4249_RS07970 0.18 +0.1
1,597,555 + A4249_RS07970 0.18 -0.3
1,597,556 - A4249_RS07970 0.18 -1.6
1,597,556 - A4249_RS07970 0.18 +1.2
1,597,556 - A4249_RS07970 0.18 -3.3
1,597,556 - A4249_RS07970 0.18 -0.4
1,597,556 - A4249_RS07970 0.18 +1.2
1,597,556 - A4249_RS07970 0.18 +0.0
1,597,556 - A4249_RS07970 0.18 +1.7
1,597,556 - A4249_RS07970 0.18 +0.3
1,597,556 - A4249_RS07970 0.18 -1.3
1,597,557 + A4249_RS07970 0.18 -0.8
1,597,557 + A4249_RS07970 0.18 +1.3
1,597,557 + A4249_RS07970 0.18 -0.9
1,597,557 + A4249_RS07970 0.18 -1.0
1,597,557 + A4249_RS07970 0.18 -0.1
1,597,557 + A4249_RS07970 0.18 +0.5
1,597,557 + A4249_RS07970 0.18 +1.6
1,597,557 + A4249_RS07970 0.18 -0.7
1,597,557 + A4249_RS07970 0.18 -0.9
1,597,557 + A4249_RS07970 0.18 -0.4
1,597,557 + A4249_RS07970 0.18 +1.1
1,597,558 - A4249_RS07970 0.19 +0.3
1,597,558 - A4249_RS07970 0.19 -0.3
1,597,558 - A4249_RS07970 0.19 +1.5
1,597,558 - A4249_RS07970 0.19 -1.3
1,597,558 - A4249_RS07970 0.19 +0.3
1,597,558 - A4249_RS07970 0.19 -2.5
1,597,558 - A4249_RS07970 0.19 +0.3
1,597,558 - A4249_RS07970 0.19 +2.0
1,597,690 + A4249_RS07970 0.39 +0.4
1,597,690 + A4249_RS07970 0.39 -0.7
1,597,690 + A4249_RS07970 0.39 +0.9
1,597,690 + A4249_RS07970 0.39 -1.0
1,597,690 + A4249_RS07970 0.39 -0.7
1,597,690 + A4249_RS07970 0.39 +0.5
1,597,690 + A4249_RS07970 0.39 +0.1
1,597,691 - A4249_RS07970 0.39 -1.8
1,597,691 - A4249_RS07970 0.39 -1.0
1,597,691 - A4249_RS07970 0.39 +1.9
1,597,691 - A4249_RS07970 0.39 -0.8
1,597,691 - A4249_RS07970 0.39 +0.7
1,597,909 + A4249_RS07970 0.73 -0.7
1,597,910 - A4249_RS07970 0.73 +0.2
1,597,910 - A4249_RS07970 0.73 -0.7
1,598,083 + -1.8
1,598,084 - +0.7
1,598,095 + +1.9
1,598,095 + -4.0
1,598,095 + -0.4
1,598,095 + -0.7
1,598,095 + -1.3
1,598,095 + +0.7
1,598,095 + -0.7
1,598,095 + +0.1
1,598,095 + +1.3
1,598,095 + -0.4
1,598,095 + -2.3
1,598,095 + +0.3
1,598,095 + -0.9
1,598,095 + -1.3
1,598,095 + +0.1
1,598,095 + +0.6
1,598,096 - +2.6
1,598,096 - +0.1
1,598,096 - -2.9
1,598,096 - +0.9
1,598,096 - -0.8
1,598,096 - +0.4
1,598,096 - +0.3
1,598,096 - +0.2
1,598,096 - +0.9
1,598,096 - -0.5
1,598,096 - -0.7
1,598,096 - -2.2
1,598,096 - -0.3
1,598,096 - +1.0
1,598,096 - -0.8
1,598,114 + -1.7
1,598,114 + +0.1
1,598,114 + +0.3
1,598,114 + +0.2
1,598,114 + -2.0
1,598,114 + -1.3
1,598,114 + -1.2
1,598,115 - +1.7
1,598,115 - -1.4
1,598,115 - +0.3
1,598,115 - -1.0
1,598,115 - -2.0
1,598,115 - +0.3
1,598,115 - +0.3
1,598,115 - -1.7
1,598,115 - +0.1
1,598,115 - -0.5
1,598,115 - -0.3
1,598,115 - -0.9
1,598,115 - +0.3
1,598,115 - +0.3
1,598,118 + -1.4
1,598,119 - +0.4
1,598,119 - -1.8
1,598,119 - +0.8
1,598,119 - -0.4
1,598,119 - +0.0
1,598,183 + -1.8
1,598,183 + +0.9
1,598,183 + -1.9
1,598,183 + +0.2
1,598,184 - -2.3
1,598,184 - +0.3
1,598,184 - -1.7
1,598,212 + -0.2
1,598,212 + -0.4
1,598,212 + -0.9
1,598,212 + -0.2
1,598,213 - -0.7
1,598,213 - -1.7
1,598,213 - -0.4
1,598,213 - +0.0

Or see this region's nucleotide sequence