Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS07940

Experiment: D-Glucose (C); 30C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS07935 and A4249_RS07940 are separated by 45 nucleotidesA4249_RS07940 and A4249_RS07945 are separated by 142 nucleotides A4249_RS07935: A4249_RS07935 - methionine synthase, at 1,586,688 to 1,589,354 _RS07935 A4249_RS07940: A4249_RS07940 - hypothetical protein, at 1,589,400 to 1,589,954 _RS07940 A4249_RS07945: A4249_RS07945 - TonB-dependent receptor, at 1,590,097 to 1,592,988 _RS07945 Position (kb) 1589 1590Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1 2 3at 1588.815 kb on + strand, within A4249_RS07935at 1588.815 kb on + strand, within A4249_RS07935at 1588.815 kb on + strand, within A4249_RS07935at 1588.815 kb on + strand, within A4249_RS07935at 1588.815 kb on + strand, within A4249_RS07935at 1588.816 kb on - strand, within A4249_RS07935at 1588.816 kb on - strand, within A4249_RS07935at 1588.816 kb on - strand, within A4249_RS07935at 1588.816 kb on - strand, within A4249_RS07935at 1588.816 kb on - strand, within A4249_RS07935at 1588.816 kb on - strand, within A4249_RS07935at 1588.816 kb on - strand, within A4249_RS07935at 1588.816 kb on - strand, within A4249_RS07935at 1588.816 kb on - strand, within A4249_RS07935at 1588.894 kb on - strand, within A4249_RS07935at 1588.986 kb on + strand, within A4249_RS07935at 1588.986 kb on + strand, within A4249_RS07935at 1588.986 kb on + strand, within A4249_RS07935at 1588.987 kb on - strand, within A4249_RS07935at 1589.034 kb on + strand, within A4249_RS07935at 1589.034 kb on + strand, within A4249_RS07935at 1589.034 kb on + strand, within A4249_RS07935at 1589.034 kb on + strand, within A4249_RS07935at 1589.034 kb on + strand, within A4249_RS07935at 1589.034 kb on + strand, within A4249_RS07935at 1589.035 kb on - strand, within A4249_RS07935at 1589.035 kb on - strand, within A4249_RS07935at 1589.110 kb on + strandat 1589.110 kb on + strandat 1589.110 kb on + strandat 1589.110 kb on + strandat 1589.111 kb on - strandat 1589.111 kb on - strandat 1589.111 kb on - strandat 1589.151 kb on + strandat 1589.151 kb on + strandat 1589.151 kb on + strandat 1589.151 kb on + strandat 1589.151 kb on + strandat 1589.151 kb on + strandat 1589.151 kb on + strandat 1589.151 kb on + strandat 1589.151 kb on + strandat 1589.151 kb on + strandat 1589.152 kb on - strandat 1589.152 kb on - strandat 1589.152 kb on - strandat 1589.152 kb on - strandat 1589.152 kb on - strandat 1589.152 kb on - strandat 1589.152 kb on - strandat 1589.152 kb on - strandat 1589.211 kb on + strandat 1589.211 kb on + strandat 1589.211 kb on + strandat 1589.211 kb on + strandat 1589.211 kb on + strandat 1589.212 kb on - strandat 1589.253 kb on + strandat 1589.253 kb on + strandat 1589.253 kb on + strandat 1589.253 kb on + strandat 1589.316 kb on + strandat 1589.316 kb on + strandat 1589.317 kb on - strandat 1589.317 kb on - strandat 1589.317 kb on - strandat 1589.317 kb on - strandat 1589.409 kb on - strandat 1589.767 kb on + strand, within A4249_RS07940at 1589.767 kb on + strand, within A4249_RS07940at 1589.767 kb on + strand, within A4249_RS07940at 1589.806 kb on + strand, within A4249_RS07940at 1589.806 kb on + strand, within A4249_RS07940at 1589.806 kb on + strand, within A4249_RS07940at 1589.806 kb on + strand, within A4249_RS07940at 1589.807 kb on - strand, within A4249_RS07940at 1589.807 kb on - strand, within A4249_RS07940at 1589.807 kb on - strand, within A4249_RS07940at 1589.807 kb on - strand, within A4249_RS07940at 1589.807 kb on - strand, within A4249_RS07940at 1589.858 kb on + strand, within A4249_RS07940at 1590.025 kb on + strandat 1590.026 kb on - strandat 1590.098 kb on + strandat 1590.098 kb on + strandat 1590.122 kb on + strandat 1590.122 kb on + strandat 1590.122 kb on + strandat 1590.122 kb on + strandat 1590.122 kb on + strandat 1590.123 kb on - strandat 1590.123 kb on - strandat 1590.123 kb on - strandat 1590.123 kb on - strandat 1590.123 kb on - strandat 1590.123 kb on - strandat 1590.123 kb on - strandat 1590.126 kb on - strandat 1590.126 kb on - strandat 1590.146 kb on + strandat 1590.146 kb on + strandat 1590.146 kb on + strandat 1590.147 kb on - strandat 1590.147 kb on - strandat 1590.147 kb on - strandat 1590.275 kb on + strandat 1590.275 kb on + strandat 1590.275 kb on + strandat 1590.275 kb on + strandat 1590.276 kb on - strandat 1590.276 kb on - strandat 1590.276 kb on - strandat 1590.276 kb on - strandat 1590.435 kb on + strand, within A4249_RS07945at 1590.444 kb on + strand, within A4249_RS07945at 1590.476 kb on + strand, within A4249_RS07945at 1590.476 kb on + strand, within A4249_RS07945at 1590.476 kb on + strand, within A4249_RS07945at 1590.476 kb on + strand, within A4249_RS07945at 1590.476 kb on + strand, within A4249_RS07945at 1590.477 kb on - strand, within A4249_RS07945at 1590.477 kb on - strand, within A4249_RS07945at 1590.477 kb on - strand, within A4249_RS07945at 1590.477 kb on - strand, within A4249_RS07945at 1590.477 kb on - strand, within A4249_RS07945at 1590.668 kb on + strand, within A4249_RS07945at 1590.668 kb on + strand, within A4249_RS07945at 1590.668 kb on + strand, within A4249_RS07945at 1590.668 kb on + strand, within A4249_RS07945at 1590.668 kb on + strand, within A4249_RS07945at 1590.668 kb on + strand, within A4249_RS07945at 1590.668 kb on + strand, within A4249_RS07945at 1590.668 kb on + strand, within A4249_RS07945at 1590.668 kb on + strand, within A4249_RS07945at 1590.668 kb on + strand, within A4249_RS07945at 1590.669 kb on - strand, within A4249_RS07945at 1590.669 kb on - strand, within A4249_RS07945at 1590.669 kb on - strand, within A4249_RS07945at 1590.672 kb on + strand, within A4249_RS07945at 1590.672 kb on + strand, within A4249_RS07945at 1590.672 kb on + strand, within A4249_RS07945at 1590.672 kb on + strand, within A4249_RS07945at 1590.672 kb on + strand, within A4249_RS07945at 1590.672 kb on + strand, within A4249_RS07945at 1590.672 kb on + strand, within A4249_RS07945at 1590.672 kb on + strand, within A4249_RS07945at 1590.672 kb on + strand, within A4249_RS07945at 1590.673 kb on - strand, within A4249_RS07945at 1590.673 kb on - strand, within A4249_RS07945at 1590.673 kb on - strand, within A4249_RS07945at 1590.673 kb on - strand, within A4249_RS07945at 1590.673 kb on - strand, within A4249_RS07945at 1590.673 kb on - strand, within A4249_RS07945at 1590.673 kb on - strand, within A4249_RS07945at 1590.673 kb on - strand, within A4249_RS07945at 1590.673 kb on - strand, within A4249_RS07945at 1590.675 kb on + strand, within A4249_RS07945at 1590.675 kb on + strand, within A4249_RS07945at 1590.675 kb on + strand, within A4249_RS07945at 1590.675 kb on + strand, within A4249_RS07945at 1590.675 kb on + strand, within A4249_RS07945at 1590.675 kb on + strand, within A4249_RS07945at 1590.676 kb on - strand, within A4249_RS07945at 1590.676 kb on - strand, within A4249_RS07945at 1590.776 kb on + strand, within A4249_RS07945at 1590.776 kb on + strand, within A4249_RS07945at 1590.776 kb on + strand, within A4249_RS07945at 1590.776 kb on + strand, within A4249_RS07945at 1590.776 kb on + strand, within A4249_RS07945at 1590.776 kb on + strand, within A4249_RS07945at 1590.776 kb on + strand, within A4249_RS07945at 1590.776 kb on + strand, within A4249_RS07945at 1590.776 kb on + strand, within A4249_RS07945at 1590.776 kb on + strand, within A4249_RS07945at 1590.777 kb on - strand, within A4249_RS07945at 1590.777 kb on - strand, within A4249_RS07945at 1590.777 kb on - strand, within A4249_RS07945at 1590.777 kb on - strand, within A4249_RS07945at 1590.777 kb on - strand, within A4249_RS07945at 1590.777 kb on - strand, within A4249_RS07945at 1590.777 kb on - strand, within A4249_RS07945at 1590.777 kb on - strand, within A4249_RS07945at 1590.777 kb on - strand, within A4249_RS07945at 1590.779 kb on + strand, within A4249_RS07945at 1590.780 kb on - strand, within A4249_RS07945at 1590.833 kb on + strand, within A4249_RS07945at 1590.833 kb on + strand, within A4249_RS07945at 1590.833 kb on + strand, within A4249_RS07945at 1590.885 kb on + strand, within A4249_RS07945at 1590.926 kb on + strand, within A4249_RS07945at 1590.926 kb on + strand, within A4249_RS07945at 1590.926 kb on + strand, within A4249_RS07945at 1590.927 kb on - strand, within A4249_RS07945at 1590.927 kb on - strand, within A4249_RS07945at 1590.927 kb on - strand, within A4249_RS07945at 1590.927 kb on - strand, within A4249_RS07945at 1590.927 kb on - strand, within A4249_RS07945at 1590.927 kb on - strand, within A4249_RS07945at 1590.927 kb on - strand, within A4249_RS07945at 1590.927 kb on - strand, within A4249_RS07945

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C); 30C
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1,588,815 + A4249_RS07935 0.80 -4.5
1,588,815 + A4249_RS07935 0.80 -3.0
1,588,815 + A4249_RS07935 0.80 -1.7
1,588,815 + A4249_RS07935 0.80 -2.9
1,588,815 + A4249_RS07935 0.80 -2.5
1,588,816 - A4249_RS07935 0.80 -1.7
1,588,816 - A4249_RS07935 0.80 -3.4
1,588,816 - A4249_RS07935 0.80 -2.3
1,588,816 - A4249_RS07935 0.80 -3.2
1,588,816 - A4249_RS07935 0.80 -4.1
1,588,816 - A4249_RS07935 0.80 -6.2
1,588,816 - A4249_RS07935 0.80 -1.3
1,588,816 - A4249_RS07935 0.80 +0.3
1,588,816 - A4249_RS07935 0.80 -2.3
1,588,894 - A4249_RS07935 0.83 -3.9
1,588,986 + A4249_RS07935 0.86 -3.0
1,588,986 + A4249_RS07935 0.86 -2.8
1,588,986 + A4249_RS07935 0.86 -4.6
1,588,987 - A4249_RS07935 0.86 -1.7
1,589,034 + A4249_RS07935 0.88 -3.4
1,589,034 + A4249_RS07935 0.88 -2.7
1,589,034 + A4249_RS07935 0.88 -1.3
1,589,034 + A4249_RS07935 0.88 -3.2
1,589,034 + A4249_RS07935 0.88 -2.3
1,589,034 + A4249_RS07935 0.88 +0.3
1,589,035 - A4249_RS07935 0.88 -3.2
1,589,035 - A4249_RS07935 0.88 -3.5
1,589,110 + +0.3
1,589,110 + -2.5
1,589,110 + -4.8
1,589,110 + -5.4
1,589,111 - -0.7
1,589,111 - -3.4
1,589,111 - +0.3
1,589,151 + -1.7
1,589,151 + -3.4
1,589,151 + -1.7
1,589,151 + -5.1
1,589,151 + -3.4
1,589,151 + +0.3
1,589,151 + -3.1
1,589,151 + -2.9
1,589,151 + -1.7
1,589,151 + -3.0
1,589,152 - -2.0
1,589,152 - -2.7
1,589,152 - -3.2
1,589,152 - -3.4
1,589,152 - -2.3
1,589,152 - -0.7
1,589,152 - -0.7
1,589,152 - -1.7
1,589,211 + -3.9
1,589,211 + -5.8
1,589,211 + -2.5
1,589,211 + -3.2
1,589,211 + -3.4
1,589,212 - -4.2
1,589,253 + -2.0
1,589,253 + -1.3
1,589,253 + -4.2
1,589,253 + -3.0
1,589,316 + +0.1
1,589,316 + -0.3
1,589,317 - +0.2
1,589,317 - -0.4
1,589,317 - +0.9
1,589,317 - -0.1
1,589,409 - +1.4
1,589,767 + A4249_RS07940 0.66 -1.9
1,589,767 + A4249_RS07940 0.66 +0.5
1,589,767 + A4249_RS07940 0.66 -0.0
1,589,806 + A4249_RS07940 0.73 -1.7
1,589,806 + A4249_RS07940 0.73 -2.0
1,589,806 + A4249_RS07940 0.73 -1.3
1,589,806 + A4249_RS07940 0.73 -0.7
1,589,807 - A4249_RS07940 0.73 -2.0
1,589,807 - A4249_RS07940 0.73 -0.7
1,589,807 - A4249_RS07940 0.73 -3.0
1,589,807 - A4249_RS07940 0.73 -0.7
1,589,807 - A4249_RS07940 0.73 -0.7
1,589,858 + A4249_RS07940 0.83 -1.0
1,590,025 + -0.3
1,590,026 - -0.9
1,590,098 + -0.1
1,590,098 + -0.2
1,590,122 + -2.1
1,590,122 + -0.1
1,590,122 + +0.7
1,590,122 + -1.2
1,590,122 + -0.5
1,590,123 - +0.1
1,590,123 - -0.6
1,590,123 - -1.0
1,590,123 - +0.3
1,590,123 - -0.6
1,590,123 - +0.3
1,590,123 - -0.6
1,590,126 - +0.3
1,590,126 - +0.4
1,590,146 + +0.3
1,590,146 + -2.0
1,590,146 + -0.7
1,590,147 - +0.5
1,590,147 - -0.9
1,590,147 - -1.8
1,590,275 + -0.5
1,590,275 + +2.6
1,590,275 + -0.3
1,590,275 + +1.0
1,590,276 - +0.5
1,590,276 - -0.8
1,590,276 - -0.1
1,590,276 - +1.8
1,590,435 + A4249_RS07945 0.12 -0.2
1,590,444 + A4249_RS07945 0.12 +0.1
1,590,476 + A4249_RS07945 0.13 -1.5
1,590,476 + A4249_RS07945 0.13 -0.9
1,590,476 + A4249_RS07945 0.13 +1.2
1,590,476 + A4249_RS07945 0.13 +3.6
1,590,476 + A4249_RS07945 0.13 -0.1
1,590,477 - A4249_RS07945 0.13 -0.5
1,590,477 - A4249_RS07945 0.13 -1.0
1,590,477 - A4249_RS07945 0.13 +2.5
1,590,477 - A4249_RS07945 0.13 -0.1
1,590,477 - A4249_RS07945 0.13 +0.8
1,590,668 + A4249_RS07945 0.20 +1.2
1,590,668 + A4249_RS07945 0.20 +0.2
1,590,668 + A4249_RS07945 0.20 +1.1
1,590,668 + A4249_RS07945 0.20 -0.3
1,590,668 + A4249_RS07945 0.20 -0.5
1,590,668 + A4249_RS07945 0.20 +0.0
1,590,668 + A4249_RS07945 0.20 +0.4
1,590,668 + A4249_RS07945 0.20 +1.2
1,590,668 + A4249_RS07945 0.20 +0.1
1,590,668 + A4249_RS07945 0.20 -0.3
1,590,669 - A4249_RS07945 0.20 -0.1
1,590,669 - A4249_RS07945 0.20 +0.3
1,590,669 - A4249_RS07945 0.20 -0.4
1,590,672 + A4249_RS07945 0.20 +0.3
1,590,672 + A4249_RS07945 0.20 -0.3
1,590,672 + A4249_RS07945 0.20 -0.2
1,590,672 + A4249_RS07945 0.20 +1.1
1,590,672 + A4249_RS07945 0.20 +0.3
1,590,672 + A4249_RS07945 0.20 -0.1
1,590,672 + A4249_RS07945 0.20 +0.5
1,590,672 + A4249_RS07945 0.20 -1.0
1,590,672 + A4249_RS07945 0.20 -0.7
1,590,673 - A4249_RS07945 0.20 +0.2
1,590,673 - A4249_RS07945 0.20 +0.4
1,590,673 - A4249_RS07945 0.20 -0.4
1,590,673 - A4249_RS07945 0.20 +1.1
1,590,673 - A4249_RS07945 0.20 -0.0
1,590,673 - A4249_RS07945 0.20 +0.2
1,590,673 - A4249_RS07945 0.20 -1.0
1,590,673 - A4249_RS07945 0.20 -0.3
1,590,673 - A4249_RS07945 0.20 +0.5
1,590,675 + A4249_RS07945 0.20 +0.3
1,590,675 + A4249_RS07945 0.20 -0.3
1,590,675 + A4249_RS07945 0.20 -0.8
1,590,675 + A4249_RS07945 0.20 -1.5
1,590,675 + A4249_RS07945 0.20 +0.1
1,590,675 + A4249_RS07945 0.20 -2.7
1,590,676 - A4249_RS07945 0.20 +0.6
1,590,676 - A4249_RS07945 0.20 +0.3
1,590,776 + A4249_RS07945 0.23 -0.1
1,590,776 + A4249_RS07945 0.23 -0.4
1,590,776 + A4249_RS07945 0.23 -0.9
1,590,776 + A4249_RS07945 0.23 +0.6
1,590,776 + A4249_RS07945 0.23 -0.1
1,590,776 + A4249_RS07945 0.23 -0.9
1,590,776 + A4249_RS07945 0.23 +0.8
1,590,776 + A4249_RS07945 0.23 +0.4
1,590,776 + A4249_RS07945 0.23 -1.7
1,590,776 + A4249_RS07945 0.23 +2.4
1,590,777 - A4249_RS07945 0.24 +0.3
1,590,777 - A4249_RS07945 0.24 -0.3
1,590,777 - A4249_RS07945 0.24 -0.5
1,590,777 - A4249_RS07945 0.24 -0.1
1,590,777 - A4249_RS07945 0.24 +0.0
1,590,777 - A4249_RS07945 0.24 -0.2
1,590,777 - A4249_RS07945 0.24 -0.5
1,590,777 - A4249_RS07945 0.24 +0.2
1,590,777 - A4249_RS07945 0.24 -1.6
1,590,779 + A4249_RS07945 0.24 -0.4
1,590,780 - A4249_RS07945 0.24 +0.3
1,590,833 + A4249_RS07945 0.25 +0.1
1,590,833 + A4249_RS07945 0.25 -3.6
1,590,833 + A4249_RS07945 0.25 +1.2
1,590,885 + A4249_RS07945 0.27 -0.2
1,590,926 + A4249_RS07945 0.29 -0.9
1,590,926 + A4249_RS07945 0.29 -1.9
1,590,926 + A4249_RS07945 0.29 -1.3
1,590,927 - A4249_RS07945 0.29 +0.4
1,590,927 - A4249_RS07945 0.29 +1.1
1,590,927 - A4249_RS07945 0.29 +1.7
1,590,927 - A4249_RS07945 0.29 -0.4
1,590,927 - A4249_RS07945 0.29 -0.6
1,590,927 - A4249_RS07945 0.29 +0.1
1,590,927 - A4249_RS07945 0.29 -1.4
1,590,927 - A4249_RS07945 0.29 -0.2

Or see this region's nucleotide sequence