Experiment: D-Glucose (C); 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS07910 and A4249_RS07915 are separated by 2 nucleotides A4249_RS07915 and A4249_RS07920 are separated by 118 nucleotides A4249_RS07920 and A4249_RS07925 overlap by 1 nucleotides A4249_RS07925 and A4249_RS07930 overlap by 4 nucleotides
A4249_RS07910: A4249_RS07910 - 2-hydroxyacid dehydrogenase, at 1,582,241 to 1,583,167
_RS07910
A4249_RS07915: A4249_RS07915 - EF-hand domain-containing protein, at 1,583,170 to 1,583,574
_RS07915
A4249_RS07920: A4249_RS07920 - metalloregulator ArsR/SmtB family transcription factor, at 1,583,693 to 1,584,652
_RS07920
A4249_RS07925: A4249_RS07925 - methylenetetrahydrofolate reductase [NAD(P)H], at 1,584,652 to 1,585,608
_RS07925
A4249_RS07930: A4249_RS07930 - homocysteine S-methyltransferase family protein, at 1,585,605 to 1,586,687
_RS07930
Position (kb)
1583
1584
1585 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 1583.274 kb on + strand, within A4249_RS07915 at 1583.274 kb on + strand, within A4249_RS07915 at 1583.274 kb on + strand, within A4249_RS07915 at 1583.274 kb on + strand, within A4249_RS07915 at 1583.274 kb on + strand, within A4249_RS07915 at 1583.274 kb on + strand, within A4249_RS07915 at 1583.274 kb on + strand, within A4249_RS07915 at 1583.274 kb on + strand, within A4249_RS07915 at 1583.275 kb on - strand, within A4249_RS07915 at 1583.275 kb on - strand, within A4249_RS07915 at 1583.353 kb on + strand, within A4249_RS07915 at 1583.353 kb on + strand, within A4249_RS07915 at 1583.353 kb on + strand, within A4249_RS07915 at 1583.354 kb on - strand, within A4249_RS07915 at 1583.454 kb on + strand, within A4249_RS07915 at 1583.568 kb on + strand at 1583.568 kb on + strand at 1583.568 kb on + strand at 1583.568 kb on + strand at 1583.568 kb on + strand at 1583.569 kb on - strand at 1583.604 kb on + strand at 1583.604 kb on + strand at 1583.604 kb on + strand at 1583.605 kb on - strand at 1583.670 kb on + strand at 1583.671 kb on - strand at 1583.671 kb on - strand at 1583.676 kb on + strand at 1583.676 kb on + strand at 1583.683 kb on - strand at 1583.684 kb on + strand at 1583.684 kb on + strand at 1583.685 kb on - strand at 1583.903 kb on + strand, within A4249_RS07920 at 1583.903 kb on + strand, within A4249_RS07920 at 1583.903 kb on + strand, within A4249_RS07920 at 1583.903 kb on + strand, within A4249_RS07920 at 1583.903 kb on + strand, within A4249_RS07920 at 1583.904 kb on - strand, within A4249_RS07920 at 1583.906 kb on + strand, within A4249_RS07920 at 1583.906 kb on + strand, within A4249_RS07920 at 1583.906 kb on + strand, within A4249_RS07920 at 1583.906 kb on + strand, within A4249_RS07920 at 1583.907 kb on - strand, within A4249_RS07920 at 1583.907 kb on - strand, within A4249_RS07920 at 1583.907 kb on - strand, within A4249_RS07920 at 1583.965 kb on - strand, within A4249_RS07920 at 1584.041 kb on + strand, within A4249_RS07920 at 1584.042 kb on - strand, within A4249_RS07920 at 1584.086 kb on + strand, within A4249_RS07920 at 1584.086 kb on + strand, within A4249_RS07920 at 1584.086 kb on + strand, within A4249_RS07920 at 1584.086 kb on + strand, within A4249_RS07920 at 1584.087 kb on - strand, within A4249_RS07920 at 1584.087 kb on - strand, within A4249_RS07920 at 1584.087 kb on - strand, within A4249_RS07920 at 1584.087 kb on - strand, within A4249_RS07920 at 1584.374 kb on + strand, within A4249_RS07920 at 1584.374 kb on + strand, within A4249_RS07920 at 1584.375 kb on - strand, within A4249_RS07920 at 1584.475 kb on + strand, within A4249_RS07920 at 1584.475 kb on + strand, within A4249_RS07920 at 1584.475 kb on + strand, within A4249_RS07920 at 1584.637 kb on + strand at 1584.637 kb on + strand at 1584.859 kb on + strand, within A4249_RS07925 at 1584.859 kb on + strand, within A4249_RS07925 at 1584.997 kb on + strand, within A4249_RS07925 at 1584.997 kb on + strand, within A4249_RS07925 at 1584.997 kb on + strand, within A4249_RS07925 at 1584.997 kb on + strand, within A4249_RS07925 at 1584.998 kb on - strand, within A4249_RS07925 at 1584.998 kb on - strand, within A4249_RS07925 at 1585.072 kb on + strand, within A4249_RS07925 at 1585.072 kb on + strand, within A4249_RS07925 at 1585.073 kb on - strand, within A4249_RS07925 at 1585.073 kb on - strand, within A4249_RS07925 at 1585.094 kb on - strand, within A4249_RS07925 at 1585.162 kb on + strand, within A4249_RS07925 at 1585.398 kb on + strand, within A4249_RS07925 at 1585.531 kb on + strand at 1585.531 kb on + strand at 1585.532 kb on - strand at 1585.532 kb on - strand at 1585.532 kb on - strand at 1585.558 kb on + strand at 1585.558 kb on + strand at 1585.558 kb on + strand at 1585.558 kb on + strand at 1585.558 kb on + strand at 1585.558 kb on + strand at 1585.559 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 30C remove 1,583,274 + A4249_RS07915 0.26 +0.3 1,583,274 + A4249_RS07915 0.26 -0.4 1,583,274 + A4249_RS07915 0.26 -0.2 1,583,274 + A4249_RS07915 0.26 -0.5 1,583,274 + A4249_RS07915 0.26 +0.0 1,583,274 + A4249_RS07915 0.26 +0.1 1,583,274 + A4249_RS07915 0.26 -0.1 1,583,274 + A4249_RS07915 0.26 -1.7 1,583,275 - A4249_RS07915 0.26 +1.6 1,583,275 - A4249_RS07915 0.26 -1.6 1,583,353 + A4249_RS07915 0.45 -0.5 1,583,353 + A4249_RS07915 0.45 -0.4 1,583,353 + A4249_RS07915 0.45 -0.8 1,583,354 - A4249_RS07915 0.45 +1.1 1,583,454 + A4249_RS07915 0.70 -0.7 1,583,568 + +0.3 1,583,568 + +0.8 1,583,568 + +1.3 1,583,568 + +0.9 1,583,568 + +1.1 1,583,569 - +0.4 1,583,604 + -1.4 1,583,604 + -0.7 1,583,604 + -2.4 1,583,605 - -0.4 1,583,670 + -0.3 1,583,671 - -2.9 1,583,671 - -2.3 1,583,676 + -2.4 1,583,676 + -1.8 1,583,683 - -0.5 1,583,684 + -1.3 1,583,684 + +0.3 1,583,685 - -1.7 1,583,903 + A4249_RS07920 0.22 -2.3 1,583,903 + A4249_RS07920 0.22 -2.3 1,583,903 + A4249_RS07920 0.22 -2.5 1,583,903 + A4249_RS07920 0.22 -2.7 1,583,903 + A4249_RS07920 0.22 -1.7 1,583,904 - A4249_RS07920 0.22 -2.5 1,583,906 + A4249_RS07920 0.22 -0.7 1,583,906 + A4249_RS07920 0.22 +0.3 1,583,906 + A4249_RS07920 0.22 -3.0 1,583,906 + A4249_RS07920 0.22 -2.3 1,583,907 - A4249_RS07920 0.22 -1.7 1,583,907 - A4249_RS07920 0.22 -1.7 1,583,907 - A4249_RS07920 0.22 -3.0 1,583,965 - A4249_RS07920 0.28 -0.7 1,584,041 + A4249_RS07920 0.36 +0.3 1,584,042 - A4249_RS07920 0.36 -2.7 1,584,086 + A4249_RS07920 0.41 -3.2 1,584,086 + A4249_RS07920 0.41 -3.8 1,584,086 + A4249_RS07920 0.41 -2.7 1,584,086 + A4249_RS07920 0.41 -0.7 1,584,087 - A4249_RS07920 0.41 -2.0 1,584,087 - A4249_RS07920 0.41 -1.7 1,584,087 - A4249_RS07920 0.41 -0.7 1,584,087 - A4249_RS07920 0.41 -1.3 1,584,374 + A4249_RS07920 0.71 -1.3 1,584,374 + A4249_RS07920 0.71 -2.0 1,584,375 - A4249_RS07920 0.71 -2.5 1,584,475 + A4249_RS07920 0.81 -2.0 1,584,475 + A4249_RS07920 0.81 -2.5 1,584,475 + A4249_RS07920 0.81 -1.3 1,584,637 + -0.7 1,584,637 + +0.3 1,584,859 + A4249_RS07925 0.22 -5.0 1,584,859 + A4249_RS07925 0.22 -4.7 1,584,997 + A4249_RS07925 0.36 -4.2 1,584,997 + A4249_RS07925 0.36 -4.1 1,584,997 + A4249_RS07925 0.36 -3.8 1,584,997 + A4249_RS07925 0.36 -1.3 1,584,998 - A4249_RS07925 0.36 -3.4 1,584,998 - A4249_RS07925 0.36 -2.7 1,585,072 + A4249_RS07925 0.44 -2.3 1,585,072 + A4249_RS07925 0.44 -5.9 1,585,073 - A4249_RS07925 0.44 -3.0 1,585,073 - A4249_RS07925 0.44 -1.3 1,585,094 - A4249_RS07925 0.46 -3.2 1,585,162 + A4249_RS07925 0.53 -3.0 1,585,398 + A4249_RS07925 0.78 -4.7 1,585,531 + -4.9 1,585,531 + -4.2 1,585,532 - -3.5 1,585,532 - -4.1 1,585,532 - -3.4 1,585,558 + -3.2 1,585,558 + -3.9 1,585,558 + -1.8 1,585,558 + -3.6 1,585,558 + -2.9 1,585,558 + -4.5 1,585,559 - -1.3
Or see this region's nucleotide sequence