Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS07810

Experiment: D-Glucose (C); 30C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS07800 and A4249_RS07805 are separated by 73 nucleotidesA4249_RS07805 and A4249_RS07810 are separated by 61 nucleotidesA4249_RS07810 and A4249_RS07815 are separated by 119 nucleotides A4249_RS07800: A4249_RS07800 - DUF2336 domain-containing protein, at 1,560,751 to 1,561,875 _RS07800 A4249_RS07805: A4249_RS07805 - NAD kinase, at 1,561,949 to 1,562,701 _RS07805 A4249_RS07810: A4249_RS07810 - hypothetical protein, at 1,562,763 to 1,563,239 _RS07810 A4249_RS07815: A4249_RS07815 - DUF2336 domain-containing protein, at 1,563,359 to 1,564,498 _RS07815 Position (kb) 1562 1563 1564Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 1562.717 kb on + strandat 1562.717 kb on + strandat 1562.717 kb on + strandat 1562.717 kb on + strandat 1562.717 kb on + strandat 1562.717 kb on + strandat 1562.717 kb on + strandat 1562.718 kb on - strandat 1562.718 kb on - strandat 1562.718 kb on - strandat 1562.731 kb on + strandat 1562.731 kb on + strandat 1562.731 kb on + strandat 1562.731 kb on + strandat 1562.731 kb on + strandat 1562.732 kb on - strandat 1562.750 kb on + strandat 1562.751 kb on - strandat 1562.751 kb on - strandat 1562.751 kb on - strandat 1562.751 kb on - strandat 1562.751 kb on - strandat 1562.751 kb on - strandat 1562.958 kb on + strand, within A4249_RS07810at 1562.958 kb on + strand, within A4249_RS07810at 1562.958 kb on + strand, within A4249_RS07810at 1562.959 kb on - strand, within A4249_RS07810at 1562.959 kb on - strand, within A4249_RS07810at 1562.985 kb on + strand, within A4249_RS07810at 1562.985 kb on + strand, within A4249_RS07810at 1562.985 kb on + strand, within A4249_RS07810at 1563.024 kb on + strand, within A4249_RS07810at 1563.024 kb on + strand, within A4249_RS07810at 1563.024 kb on + strand, within A4249_RS07810at 1563.025 kb on - strand, within A4249_RS07810at 1563.025 kb on - strand, within A4249_RS07810at 1563.025 kb on - strand, within A4249_RS07810at 1563.025 kb on - strand, within A4249_RS07810at 1563.025 kb on - strand, within A4249_RS07810at 1563.025 kb on - strand, within A4249_RS07810at 1563.126 kb on - strand, within A4249_RS07810at 1563.420 kb on + strandat 1563.421 kb on - strandat 1563.421 kb on - strandat 1563.489 kb on + strand, within A4249_RS07815at 1563.489 kb on + strand, within A4249_RS07815at 1563.489 kb on + strand, within A4249_RS07815at 1563.490 kb on - strand, within A4249_RS07815at 1563.490 kb on - strand, within A4249_RS07815at 1563.502 kb on + strand, within A4249_RS07815at 1563.502 kb on + strand, within A4249_RS07815at 1563.503 kb on - strand, within A4249_RS07815at 1563.503 kb on - strand, within A4249_RS07815at 1563.591 kb on + strand, within A4249_RS07815at 1563.591 kb on + strand, within A4249_RS07815at 1563.591 kb on + strand, within A4249_RS07815at 1563.591 kb on + strand, within A4249_RS07815at 1563.591 kb on + strand, within A4249_RS07815at 1563.591 kb on + strand, within A4249_RS07815at 1563.592 kb on - strand, within A4249_RS07815at 1563.592 kb on - strand, within A4249_RS07815at 1563.592 kb on - strand, within A4249_RS07815at 1563.592 kb on - strand, within A4249_RS07815at 1563.592 kb on - strand, within A4249_RS07815at 1563.592 kb on - strand, within A4249_RS07815at 1563.592 kb on - strand, within A4249_RS07815at 1563.592 kb on - strand, within A4249_RS07815at 1563.592 kb on - strand, within A4249_RS07815at 1563.678 kb on + strand, within A4249_RS07815at 1563.708 kb on - strand, within A4249_RS07815at 1563.831 kb on + strand, within A4249_RS07815at 1563.831 kb on + strand, within A4249_RS07815at 1563.831 kb on + strand, within A4249_RS07815at 1563.831 kb on + strand, within A4249_RS07815at 1563.831 kb on + strand, within A4249_RS07815at 1563.831 kb on + strand, within A4249_RS07815at 1563.832 kb on - strand, within A4249_RS07815at 1563.832 kb on - strand, within A4249_RS07815at 1563.832 kb on - strand, within A4249_RS07815at 1563.832 kb on - strand, within A4249_RS07815at 1563.954 kb on + strand, within A4249_RS07815at 1563.954 kb on + strand, within A4249_RS07815at 1563.954 kb on + strand, within A4249_RS07815at 1563.954 kb on + strand, within A4249_RS07815at 1563.954 kb on + strand, within A4249_RS07815at 1563.954 kb on + strand, within A4249_RS07815at 1563.955 kb on - strand, within A4249_RS07815at 1563.959 kb on + strand, within A4249_RS07815at 1563.960 kb on - strand, within A4249_RS07815

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C); 30C
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1,562,717 + +0.4
1,562,717 + +0.0
1,562,717 + +0.0
1,562,717 + -0.5
1,562,717 + -1.0
1,562,717 + +3.8
1,562,717 + +0.3
1,562,718 - +1.1
1,562,718 - -0.3
1,562,718 - -0.0
1,562,731 + +2.6
1,562,731 + +0.6
1,562,731 + -0.4
1,562,731 + -1.3
1,562,731 + +1.9
1,562,732 - -1.3
1,562,750 + +0.6
1,562,751 - +0.4
1,562,751 - -0.9
1,562,751 - -0.4
1,562,751 - -0.6
1,562,751 - +0.3
1,562,751 - +0.0
1,562,958 + A4249_RS07810 0.41 -0.1
1,562,958 + A4249_RS07810 0.41 -0.0
1,562,958 + A4249_RS07810 0.41 -0.8
1,562,959 - A4249_RS07810 0.41 -0.1
1,562,959 - A4249_RS07810 0.41 +1.5
1,562,985 + A4249_RS07810 0.47 -1.4
1,562,985 + A4249_RS07810 0.47 -0.7
1,562,985 + A4249_RS07810 0.47 +1.0
1,563,024 + A4249_RS07810 0.55 -0.7
1,563,024 + A4249_RS07810 0.55 -2.3
1,563,024 + A4249_RS07810 0.55 -1.2
1,563,025 - A4249_RS07810 0.55 +0.3
1,563,025 - A4249_RS07810 0.55 -2.3
1,563,025 - A4249_RS07810 0.55 +1.0
1,563,025 - A4249_RS07810 0.55 -1.5
1,563,025 - A4249_RS07810 0.55 +0.0
1,563,025 - A4249_RS07810 0.55 +0.7
1,563,126 - A4249_RS07810 0.76 -1.2
1,563,420 + -1.3
1,563,421 - +0.9
1,563,421 - +1.9
1,563,489 + A4249_RS07815 0.11 +1.4
1,563,489 + A4249_RS07815 0.11 +1.6
1,563,489 + A4249_RS07815 0.11 +0.3
1,563,490 - A4249_RS07815 0.11 -1.0
1,563,490 - A4249_RS07815 0.11 -0.2
1,563,502 + A4249_RS07815 0.13 +2.6
1,563,502 + A4249_RS07815 0.13 +2.7
1,563,503 - A4249_RS07815 0.13 +0.5
1,563,503 - A4249_RS07815 0.13 +0.3
1,563,591 + A4249_RS07815 0.20 -0.7
1,563,591 + A4249_RS07815 0.20 +0.2
1,563,591 + A4249_RS07815 0.20 +1.9
1,563,591 + A4249_RS07815 0.20 -0.7
1,563,591 + A4249_RS07815 0.20 -0.3
1,563,591 + A4249_RS07815 0.20 +0.1
1,563,592 - A4249_RS07815 0.20 -0.0
1,563,592 - A4249_RS07815 0.20 +1.4
1,563,592 - A4249_RS07815 0.20 +0.0
1,563,592 - A4249_RS07815 0.20 -0.1
1,563,592 - A4249_RS07815 0.20 +0.5
1,563,592 - A4249_RS07815 0.20 -0.1
1,563,592 - A4249_RS07815 0.20 -0.2
1,563,592 - A4249_RS07815 0.20 -0.3
1,563,592 - A4249_RS07815 0.20 -0.0
1,563,678 + A4249_RS07815 0.28 +0.4
1,563,708 - A4249_RS07815 0.31 +0.0
1,563,831 + A4249_RS07815 0.41 +0.9
1,563,831 + A4249_RS07815 0.41 +3.5
1,563,831 + A4249_RS07815 0.41 -0.4
1,563,831 + A4249_RS07815 0.41 +2.9
1,563,831 + A4249_RS07815 0.41 -1.0
1,563,831 + A4249_RS07815 0.41 -0.5
1,563,832 - A4249_RS07815 0.41 -1.1
1,563,832 - A4249_RS07815 0.41 -2.3
1,563,832 - A4249_RS07815 0.41 +0.2
1,563,832 - A4249_RS07815 0.41 +0.7
1,563,954 + A4249_RS07815 0.52 -2.4
1,563,954 + A4249_RS07815 0.52 -0.6
1,563,954 + A4249_RS07815 0.52 +0.5
1,563,954 + A4249_RS07815 0.52 -0.0
1,563,954 + A4249_RS07815 0.52 +1.7
1,563,954 + A4249_RS07815 0.52 +0.6
1,563,955 - A4249_RS07815 0.52 +1.6
1,563,959 + A4249_RS07815 0.53 -0.0
1,563,960 - A4249_RS07815 0.53 -0.2

Or see this region's nucleotide sequence