Experiment: D-Glucose (C); 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS07290 and A4249_RS07295 overlap by 4 nucleotides A4249_RS07295 and A4249_RS07300 are separated by 0 nucleotides A4249_RS07300 and A4249_RS07305 are separated by 103 nucleotides A4249_RS07305 and A4249_RS07310 overlap by 4 nucleotides
A4249_RS07290: A4249_RS07290 - ribonuclease E/G, at 1,458,360 to 1,459,394
_RS07290
A4249_RS07295: A4249_RS07295 - Maf family protein, at 1,459,391 to 1,459,972
_RS07295
A4249_RS07300: A4249_RS07300 - translation initiation factor IF-1, at 1,459,973 to 1,460,191
_RS07300
A4249_RS07305: A4249_RS07305 - UPF0262 family protein, at 1,460,295 to 1,460,762
_RS07305
A4249_RS07310: A4249_RS07310 - DUF2948 family protein, at 1,460,759 to 1,461,244
_RS07310
Position (kb) 1459
1460
1461 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 1459.080 kb on + strand, within A4249_RS07290 at 1459.081 kb on - strand, within A4249_RS07290 at 1459.081 kb on - strand, within A4249_RS07290 at 1459.081 kb on - strand, within A4249_RS07290 at 1459.084 kb on + strand, within A4249_RS07290 at 1459.084 kb on + strand, within A4249_RS07290 at 1459.085 kb on - strand, within A4249_RS07290 at 1459.287 kb on - strand, within A4249_RS07290 at 1459.287 kb on - strand, within A4249_RS07290 at 1460.266 kb on - strand at 1460.287 kb on - strand at 1460.287 kb on - strand at 1460.287 kb on - strand at 1460.287 kb on - strand at 1460.287 kb on - strand at 1460.287 kb on - strand at 1460.287 kb on - strand at 1460.287 kb on - strand at 1460.308 kb on + strand at 1460.309 kb on - strand at 1460.473 kb on + strand, within A4249_RS07305 at 1460.474 kb on - strand, within A4249_RS07305 at 1460.476 kb on + strand, within A4249_RS07305 at 1460.497 kb on + strand, within A4249_RS07305 at 1460.498 kb on - strand, within A4249_RS07305 at 1460.540 kb on - strand, within A4249_RS07305 at 1460.540 kb on - strand, within A4249_RS07305
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 30C remove 1,459,080 + A4249_RS07290 0.70 -0.7 1,459,081 - A4249_RS07290 0.70 +0.0 1,459,081 - A4249_RS07290 0.70 +0.3 1,459,081 - A4249_RS07290 0.70 -1.3 1,459,084 + A4249_RS07290 0.70 +2.0 1,459,084 + A4249_RS07290 0.70 -2.9 1,459,085 - A4249_RS07290 0.70 -0.7 1,459,287 - A4249_RS07290 0.90 -2.0 1,459,287 - A4249_RS07290 0.90 -3.9 1,460,266 - -1.3 1,460,287 - +0.3 1,460,287 - -1.3 1,460,287 - -1.0 1,460,287 - -0.1 1,460,287 - +0.3 1,460,287 - -0.7 1,460,287 - +0.2 1,460,287 - -0.2 1,460,308 + +3.1 1,460,309 - +1.0 1,460,473 + A4249_RS07305 0.38 -1.8 1,460,474 - A4249_RS07305 0.38 +0.3 1,460,476 + A4249_RS07305 0.39 +2.6 1,460,497 + A4249_RS07305 0.43 +1.9 1,460,498 - A4249_RS07305 0.43 -2.3 1,460,540 - A4249_RS07305 0.52 -0.8 1,460,540 - A4249_RS07305 0.52 +0.3
Or see this region's nucleotide sequence