Experiment: D-Glucose (C); 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS06770 and A4249_RS06775 are separated by 315 nucleotides A4249_RS06775 and A4249_RS06780 overlap by 11 nucleotides A4249_RS06780 and A4249_RS06785 overlap by 4 nucleotides
A4249_RS06770: A4249_RS06770 - ATP-binding protein, at 1,379,039 to 1,380,670
_RS06770
A4249_RS06775: A4249_RS06775 - guanylate kinase, at 1,380,986 to 1,381,627
_RS06775
A4249_RS06780: A4249_RS06780 - YicC family protein, at 1,381,617 to 1,382,501
_RS06780
A4249_RS06785: A4249_RS06785 - endolytic transglycosylase MltG, at 1,382,498 to 1,383,658
_RS06785
Position (kb)
1380
1381
1382 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1380.258 kb on + strand, within A4249_RS06770 at 1380.258 kb on + strand, within A4249_RS06770 at 1380.258 kb on + strand, within A4249_RS06770 at 1380.258 kb on + strand, within A4249_RS06770 at 1380.258 kb on + strand, within A4249_RS06770 at 1380.258 kb on + strand, within A4249_RS06770 at 1380.258 kb on + strand, within A4249_RS06770 at 1380.258 kb on + strand, within A4249_RS06770 at 1380.258 kb on + strand, within A4249_RS06770 at 1380.258 kb on + strand, within A4249_RS06770 at 1380.258 kb on + strand, within A4249_RS06770 at 1380.259 kb on - strand, within A4249_RS06770 at 1380.259 kb on - strand, within A4249_RS06770 at 1380.259 kb on - strand, within A4249_RS06770 at 1380.259 kb on - strand, within A4249_RS06770 at 1380.259 kb on - strand, within A4249_RS06770 at 1380.259 kb on - strand, within A4249_RS06770 at 1380.259 kb on - strand, within A4249_RS06770 at 1380.259 kb on - strand, within A4249_RS06770 at 1380.259 kb on - strand, within A4249_RS06770 at 1380.259 kb on - strand, within A4249_RS06770 at 1380.259 kb on - strand, within A4249_RS06770 at 1380.259 kb on - strand, within A4249_RS06770 at 1380.372 kb on + strand, within A4249_RS06770 at 1380.372 kb on + strand, within A4249_RS06770 at 1380.372 kb on + strand, within A4249_RS06770 at 1380.373 kb on - strand, within A4249_RS06770 at 1380.373 kb on - strand, within A4249_RS06770 at 1380.373 kb on - strand, within A4249_RS06770 at 1380.435 kb on - strand, within A4249_RS06770 at 1380.516 kb on + strand at 1380.516 kb on + strand at 1380.516 kb on + strand at 1380.516 kb on + strand at 1380.516 kb on + strand at 1380.516 kb on + strand at 1380.516 kb on + strand at 1380.517 kb on - strand at 1380.517 kb on - strand at 1380.517 kb on - strand at 1380.517 kb on - strand at 1380.517 kb on - strand at 1380.517 kb on - strand at 1380.604 kb on + strand at 1380.604 kb on + strand at 1380.605 kb on - strand at 1380.605 kb on - strand at 1380.699 kb on + strand at 1380.794 kb on - strand at 1380.816 kb on + strand at 1380.816 kb on + strand at 1380.816 kb on + strand at 1380.816 kb on + strand at 1380.817 kb on - strand at 1380.817 kb on - strand at 1380.817 kb on - strand at 1380.841 kb on - strand at 1380.841 kb on - strand at 1380.841 kb on - strand at 1380.841 kb on - strand at 1380.877 kb on - strand at 1380.888 kb on + strand at 1380.889 kb on - strand at 1380.926 kb on + strand at 1380.926 kb on + strand at 1380.926 kb on + strand at 1380.926 kb on + strand at 1380.927 kb on - strand at 1380.927 kb on - strand at 1380.927 kb on - strand at 1380.927 kb on - strand at 1380.931 kb on + strand at 1380.932 kb on - strand at 1380.932 kb on - strand at 1380.941 kb on + strand at 1380.941 kb on + strand at 1382.234 kb on - strand, within A4249_RS06780
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 30C remove 1,380,258 + A4249_RS06770 0.75 -0.9 1,380,258 + A4249_RS06770 0.75 +3.1 1,380,258 + A4249_RS06770 0.75 -1.6 1,380,258 + A4249_RS06770 0.75 +0.7 1,380,258 + A4249_RS06770 0.75 -0.0 1,380,258 + A4249_RS06770 0.75 -2.5 1,380,258 + A4249_RS06770 0.75 -0.8 1,380,258 + A4249_RS06770 0.75 +1.6 1,380,258 + A4249_RS06770 0.75 -2.3 1,380,258 + A4249_RS06770 0.75 -2.8 1,380,258 + A4249_RS06770 0.75 +0.4 1,380,259 - A4249_RS06770 0.75 +1.3 1,380,259 - A4249_RS06770 0.75 -1.1 1,380,259 - A4249_RS06770 0.75 -0.5 1,380,259 - A4249_RS06770 0.75 +0.3 1,380,259 - A4249_RS06770 0.75 -1.1 1,380,259 - A4249_RS06770 0.75 +0.2 1,380,259 - A4249_RS06770 0.75 +0.2 1,380,259 - A4249_RS06770 0.75 +0.2 1,380,259 - A4249_RS06770 0.75 -0.5 1,380,259 - A4249_RS06770 0.75 -0.3 1,380,259 - A4249_RS06770 0.75 +0.2 1,380,259 - A4249_RS06770 0.75 +1.3 1,380,372 + A4249_RS06770 0.82 -1.8 1,380,372 + A4249_RS06770 0.82 -0.8 1,380,372 + A4249_RS06770 0.82 +2.1 1,380,373 - A4249_RS06770 0.82 -0.8 1,380,373 - A4249_RS06770 0.82 +2.1 1,380,373 - A4249_RS06770 0.82 +0.2 1,380,435 - A4249_RS06770 0.86 +1.9 1,380,516 + +1.0 1,380,516 + +0.6 1,380,516 + +0.5 1,380,516 + +1.6 1,380,516 + -0.5 1,380,516 + -0.9 1,380,516 + -0.1 1,380,517 - +0.6 1,380,517 - -0.5 1,380,517 - -1.3 1,380,517 - -0.0 1,380,517 - -0.8 1,380,517 - +1.0 1,380,604 + +0.2 1,380,604 + +0.5 1,380,605 - +0.3 1,380,605 - +0.0 1,380,699 + -0.2 1,380,794 - -0.5 1,380,816 + -0.1 1,380,816 + -0.5 1,380,816 + +1.7 1,380,816 + +0.7 1,380,817 - -0.3 1,380,817 - +0.8 1,380,817 - -1.3 1,380,841 - +0.3 1,380,841 - -0.8 1,380,841 - +0.2 1,380,841 - +0.4 1,380,877 - -0.5 1,380,888 + +0.4 1,380,889 - +0.1 1,380,926 + +0.8 1,380,926 + +0.2 1,380,926 + -0.2 1,380,926 + +0.7 1,380,927 - -0.7 1,380,927 - +0.8 1,380,927 - +0.8 1,380,927 - -0.8 1,380,931 + -1.3 1,380,932 - -0.1 1,380,932 - -0.8 1,380,941 + -0.9 1,380,941 + -0.5 1,382,234 - A4249_RS06780 0.70 +0.2
Or see this region's nucleotide sequence