Experiment: D-Glucose (C); 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS04635 and A4249_RS04640 are separated by 768 nucleotides A4249_RS04640 and A4249_RS04645 overlap by 1 nucleotides A4249_RS04645 and A4249_RS04650 overlap by 4 nucleotides
A4249_RS04635: A4249_RS04635 - cyclic nucleotide-binding domain-containing protein, at 961,512 to 963,242
_RS04635
A4249_RS04640: A4249_RS04640 - serine--tRNA ligase, at 964,011 to 965,426
_RS04640
A4249_RS04645: A4249_RS04645 - 5'/3'-nucleotidase SurE, at 965,426 to 966,220
_RS04645
A4249_RS04650: A4249_RS04650 - protein-L-isoaspartate(D-aspartate) O-methyltransferase, at 966,217 to 966,861
_RS04650
Position (kb) 964
965
966 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 963.103 kb on + strand at 963.103 kb on + strand at 963.103 kb on + strand at 963.103 kb on + strand at 963.103 kb on + strand at 963.103 kb on + strand at 963.104 kb on - strand at 963.104 kb on - strand at 963.104 kb on - strand at 963.253 kb on + strand at 963.254 kb on - strand at 963.254 kb on - strand at 963.254 kb on - strand at 963.375 kb on + strand at 963.375 kb on + strand at 963.375 kb on + strand at 963.375 kb on + strand at 963.375 kb on + strand at 963.375 kb on + strand at 963.375 kb on + strand at 963.375 kb on + strand at 963.375 kb on + strand at 963.375 kb on + strand at 963.375 kb on + strand at 963.375 kb on + strand at 963.375 kb on + strand at 963.376 kb on - strand at 963.376 kb on - strand at 963.376 kb on - strand at 963.376 kb on - strand at 963.376 kb on - strand at 963.376 kb on - strand at 963.376 kb on - strand at 963.376 kb on - strand at 963.376 kb on - strand at 963.380 kb on - strand at 963.471 kb on + strand at 963.471 kb on + strand at 963.658 kb on - strand at 963.686 kb on + strand at 963.686 kb on + strand at 963.686 kb on + strand at 963.686 kb on + strand at 963.686 kb on + strand at 963.686 kb on + strand at 963.686 kb on + strand at 963.686 kb on + strand at 963.687 kb on - strand at 963.687 kb on - strand at 963.687 kb on - strand at 963.687 kb on - strand at 963.687 kb on - strand at 963.687 kb on - strand at 963.687 kb on - strand at 963.687 kb on - strand at 963.687 kb on - strand at 963.689 kb on + strand at 963.689 kb on + strand at 963.690 kb on - strand at 963.690 kb on - strand at 963.729 kb on + strand at 963.730 kb on - strand at 963.730 kb on - strand at 963.730 kb on - strand at 963.730 kb on - strand at 963.934 kb on + strand at 963.934 kb on + strand at 963.934 kb on + strand at 963.934 kb on + strand at 963.934 kb on + strand at 963.934 kb on + strand at 963.934 kb on + strand at 963.935 kb on - strand at 963.935 kb on - strand at 963.935 kb on - strand at 963.935 kb on - strand at 963.935 kb on - strand at 963.935 kb on - strand at 963.935 kb on - strand at 963.935 kb on - strand at 963.935 kb on - strand at 965.431 kb on + strand at 965.431 kb on + strand at 965.431 kb on + strand at 965.432 kb on - strand at 965.587 kb on - strand, within A4249_RS04645 at 965.587 kb on - strand, within A4249_RS04645 at 965.713 kb on + strand, within A4249_RS04645 at 965.732 kb on + strand, within A4249_RS04645 at 965.732 kb on + strand, within A4249_RS04645 at 965.732 kb on + strand, within A4249_RS04645 at 966.035 kb on + strand, within A4249_RS04645 at 966.035 kb on + strand, within A4249_RS04645 at 966.035 kb on + strand, within A4249_RS04645 at 966.035 kb on + strand, within A4249_RS04645 at 966.036 kb on - strand, within A4249_RS04645 at 966.038 kb on + strand, within A4249_RS04645 at 966.038 kb on + strand, within A4249_RS04645 at 966.038 kb on + strand, within A4249_RS04645 at 966.039 kb on - strand, within A4249_RS04645 at 966.039 kb on - strand, within A4249_RS04645 at 966.133 kb on + strand, within A4249_RS04645 at 966.133 kb on + strand, within A4249_RS04645 at 966.133 kb on + strand, within A4249_RS04645
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 30C remove 963,103 + +0.9 963,103 + -0.5 963,103 + -0.7 963,103 + -0.6 963,103 + +0.5 963,103 + -0.1 963,104 - -0.3 963,104 - -0.7 963,104 - -2.6 963,253 + -2.2 963,254 - -0.1 963,254 - -0.1 963,254 - -0.7 963,375 + +0.2 963,375 + -0.9 963,375 + +0.9 963,375 + +1.2 963,375 + -0.2 963,375 + +1.4 963,375 + +0.4 963,375 + -0.8 963,375 + +0.6 963,375 + -0.2 963,375 + +1.1 963,375 + +1.2 963,375 + -1.0 963,376 - +1.2 963,376 - -0.3 963,376 - -0.4 963,376 - -0.3 963,376 - -0.8 963,376 - -0.8 963,376 - +0.9 963,376 - +0.0 963,376 - -1.0 963,380 - +0.2 963,471 + +0.8 963,471 + -0.2 963,658 - -0.8 963,686 + +2.0 963,686 + -1.3 963,686 + +0.2 963,686 + +2.8 963,686 + +0.0 963,686 + -1.4 963,686 + +1.8 963,686 + +1.2 963,687 - +2.7 963,687 - -0.9 963,687 - -0.3 963,687 - -2.8 963,687 - +0.5 963,687 - +0.4 963,687 - +2.7 963,687 - -0.8 963,687 - +0.1 963,689 + +0.2 963,689 + +0.4 963,690 - -0.5 963,690 - +0.5 963,729 + +1.7 963,730 - +0.2 963,730 - -2.1 963,730 - -0.8 963,730 - +0.2 963,934 + +2.8 963,934 + +1.8 963,934 + +1.2 963,934 + -0.2 963,934 + -0.0 963,934 + +1.6 963,934 + -0.2 963,935 - -0.9 963,935 - -0.1 963,935 - +0.2 963,935 - -1.7 963,935 - -3.0 963,935 - +0.2 963,935 - +0.5 963,935 - -0.8 963,935 - +0.2 965,431 + +0.2 965,431 + +1.2 965,431 + +1.4 965,432 - -0.8 965,587 - A4249_RS04645 0.20 +1.2 965,587 - A4249_RS04645 0.20 -0.8 965,713 + A4249_RS04645 0.36 -2.4 965,732 + A4249_RS04645 0.38 -0.5 965,732 + A4249_RS04645 0.38 -0.8 965,732 + A4249_RS04645 0.38 -2.1 966,035 + A4249_RS04645 0.77 -1.8 966,035 + A4249_RS04645 0.77 -0.1 966,035 + A4249_RS04645 0.77 -1.0 966,035 + A4249_RS04645 0.77 -0.1 966,036 - A4249_RS04645 0.77 -1.3 966,038 + A4249_RS04645 0.77 -3.5 966,038 + A4249_RS04645 0.77 -1.4 966,038 + A4249_RS04645 0.77 -0.2 966,039 - A4249_RS04645 0.77 -2.6 966,039 - A4249_RS04645 0.77 +1.2 966,133 + A4249_RS04645 0.89 +0.2 966,133 + A4249_RS04645 0.89 +1.1 966,133 + A4249_RS04645 0.89 -0.3
Or see this region's nucleotide sequence