Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS04115

Experiment: D-Glucose (C); 30C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS04110 and A4249_RS04115 are separated by 124 nucleotidesA4249_RS04115 and A4249_RS04120 are separated by 98 nucleotides A4249_RS04110: A4249_RS04110 - response regulator, at 853,568 to 855,385 _RS04110 A4249_RS04115: A4249_RS04115 - RcnB family protein, at 855,510 to 856,004 _RS04115 A4249_RS04120: A4249_RS04120 - cisplatin damage response ATP-dependent DNA ligase, at 856,103 to 857,791 _RS04120 Position (kb) 855 856 857Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 854.636 kb on + strand, within A4249_RS04110at 854.636 kb on + strand, within A4249_RS04110at 854.636 kb on + strand, within A4249_RS04110at 854.636 kb on + strand, within A4249_RS04110at 854.637 kb on - strand, within A4249_RS04110at 854.802 kb on + strand, within A4249_RS04110at 854.802 kb on + strand, within A4249_RS04110at 854.802 kb on + strand, within A4249_RS04110at 854.802 kb on + strand, within A4249_RS04110at 854.802 kb on + strand, within A4249_RS04110at 854.803 kb on - strand, within A4249_RS04110at 854.803 kb on - strand, within A4249_RS04110at 854.806 kb on + strand, within A4249_RS04110at 854.806 kb on + strand, within A4249_RS04110at 854.807 kb on - strand, within A4249_RS04110at 854.807 kb on - strand, within A4249_RS04110at 854.807 kb on - strand, within A4249_RS04110at 854.827 kb on + strand, within A4249_RS04110at 854.827 kb on + strand, within A4249_RS04110at 854.827 kb on + strand, within A4249_RS04110at 854.827 kb on + strand, within A4249_RS04110at 854.827 kb on + strand, within A4249_RS04110at 854.827 kb on + strand, within A4249_RS04110at 854.827 kb on + strand, within A4249_RS04110at 854.828 kb on - strand, within A4249_RS04110at 854.828 kb on - strand, within A4249_RS04110at 854.828 kb on - strand, within A4249_RS04110at 854.828 kb on - strand, within A4249_RS04110at 854.828 kb on - strand, within A4249_RS04110at 854.828 kb on - strand, within A4249_RS04110at 855.266 kb on + strandat 855.267 kb on - strandat 855.463 kb on + strandat 855.463 kb on + strandat 855.463 kb on + strandat 855.463 kb on + strandat 855.463 kb on + strandat 855.463 kb on + strandat 855.463 kb on + strandat 855.463 kb on + strandat 855.464 kb on - strandat 855.464 kb on - strandat 855.464 kb on - strandat 855.651 kb on + strand, within A4249_RS04115at 855.651 kb on + strand, within A4249_RS04115at 855.721 kb on - strand, within A4249_RS04115at 855.721 kb on - strand, within A4249_RS04115at 855.741 kb on + strand, within A4249_RS04115at 855.741 kb on + strand, within A4249_RS04115at 855.742 kb on - strand, within A4249_RS04115at 855.742 kb on - strand, within A4249_RS04115at 855.742 kb on - strand, within A4249_RS04115at 855.742 kb on - strand, within A4249_RS04115at 855.771 kb on + strand, within A4249_RS04115at 855.771 kb on + strand, within A4249_RS04115at 855.771 kb on + strand, within A4249_RS04115at 855.771 kb on + strand, within A4249_RS04115at 855.771 kb on + strand, within A4249_RS04115at 855.771 kb on + strand, within A4249_RS04115at 855.772 kb on - strand, within A4249_RS04115at 855.786 kb on + strand, within A4249_RS04115at 855.786 kb on + strand, within A4249_RS04115at 855.786 kb on + strand, within A4249_RS04115at 855.786 kb on + strand, within A4249_RS04115at 855.786 kb on + strand, within A4249_RS04115at 855.787 kb on - strand, within A4249_RS04115at 855.787 kb on - strand, within A4249_RS04115at 855.787 kb on - strand, within A4249_RS04115at 855.787 kb on - strand, within A4249_RS04115at 855.787 kb on - strand, within A4249_RS04115at 855.787 kb on - strand, within A4249_RS04115at 855.805 kb on - strand, within A4249_RS04115at 855.825 kb on + strand, within A4249_RS04115at 855.825 kb on + strand, within A4249_RS04115at 855.825 kb on + strand, within A4249_RS04115at 855.825 kb on + strand, within A4249_RS04115at 855.825 kb on + strand, within A4249_RS04115at 855.825 kb on + strand, within A4249_RS04115at 855.825 kb on + strand, within A4249_RS04115at 855.825 kb on + strand, within A4249_RS04115at 855.826 kb on - strand, within A4249_RS04115at 855.826 kb on - strand, within A4249_RS04115at 855.826 kb on - strand, within A4249_RS04115at 855.826 kb on - strand, within A4249_RS04115at 855.826 kb on - strand, within A4249_RS04115at 855.826 kb on - strand, within A4249_RS04115at 855.826 kb on - strand, within A4249_RS04115at 855.826 kb on - strand, within A4249_RS04115at 855.846 kb on + strand, within A4249_RS04115at 855.847 kb on - strand, within A4249_RS04115at 855.847 kb on - strand, within A4249_RS04115at 855.864 kb on + strand, within A4249_RS04115at 855.864 kb on + strand, within A4249_RS04115at 855.864 kb on + strand, within A4249_RS04115at 855.864 kb on + strand, within A4249_RS04115at 855.864 kb on + strand, within A4249_RS04115at 855.864 kb on + strand, within A4249_RS04115at 855.864 kb on + strand, within A4249_RS04115at 855.865 kb on - strand, within A4249_RS04115at 855.865 kb on - strand, within A4249_RS04115at 855.865 kb on - strand, within A4249_RS04115at 855.865 kb on - strand, within A4249_RS04115at 855.879 kb on + strand, within A4249_RS04115at 855.879 kb on + strand, within A4249_RS04115at 855.879 kb on + strand, within A4249_RS04115at 855.879 kb on + strand, within A4249_RS04115at 855.879 kb on + strand, within A4249_RS04115at 855.879 kb on + strand, within A4249_RS04115at 855.880 kb on - strand, within A4249_RS04115at 855.880 kb on - strand, within A4249_RS04115at 855.880 kb on - strand, within A4249_RS04115at 855.880 kb on - strand, within A4249_RS04115at 855.880 kb on - strand, within A4249_RS04115at 855.880 kb on - strand, within A4249_RS04115at 855.881 kb on + strand, within A4249_RS04115at 855.881 kb on + strand, within A4249_RS04115at 855.882 kb on - strand, within A4249_RS04115at 855.916 kb on - strand, within A4249_RS04115at 855.921 kb on + strand, within A4249_RS04115at 855.921 kb on + strand, within A4249_RS04115at 855.921 kb on + strand, within A4249_RS04115at 855.921 kb on + strand, within A4249_RS04115at 855.921 kb on + strand, within A4249_RS04115at 855.921 kb on + strand, within A4249_RS04115at 855.921 kb on + strand, within A4249_RS04115at 855.922 kb on - strand, within A4249_RS04115at 855.922 kb on - strand, within A4249_RS04115at 855.922 kb on - strand, within A4249_RS04115at 855.922 kb on - strand, within A4249_RS04115at 855.922 kb on - strand, within A4249_RS04115at 855.922 kb on - strand, within A4249_RS04115at 855.922 kb on - strand, within A4249_RS04115at 855.922 kb on - strand, within A4249_RS04115at 855.922 kb on - strand, within A4249_RS04115at 856.021 kb on + strandat 856.021 kb on + strandat 856.021 kb on + strandat 856.181 kb on + strandat 856.182 kb on - strandat 856.322 kb on + strand, within A4249_RS04120at 856.322 kb on + strand, within A4249_RS04120at 856.323 kb on - strand, within A4249_RS04120at 856.323 kb on - strand, within A4249_RS04120at 856.328 kb on + strand, within A4249_RS04120at 856.328 kb on + strand, within A4249_RS04120at 856.328 kb on + strand, within A4249_RS04120at 856.328 kb on + strand, within A4249_RS04120at 856.328 kb on + strand, within A4249_RS04120at 856.328 kb on + strand, within A4249_RS04120at 856.328 kb on + strand, within A4249_RS04120at 856.328 kb on + strand, within A4249_RS04120at 856.328 kb on + strand, within A4249_RS04120at 856.328 kb on + strand, within A4249_RS04120at 856.328 kb on + strand, within A4249_RS04120at 856.328 kb on + strand, within A4249_RS04120at 856.328 kb on + strand, within A4249_RS04120at 856.328 kb on + strand, within A4249_RS04120at 856.328 kb on + strand, within A4249_RS04120at 856.328 kb on + strand, within A4249_RS04120at 856.329 kb on - strand, within A4249_RS04120at 856.329 kb on - strand, within A4249_RS04120at 856.329 kb on - strand, within A4249_RS04120at 856.329 kb on - strand, within A4249_RS04120at 856.329 kb on - strand, within A4249_RS04120at 856.329 kb on - strand, within A4249_RS04120at 856.329 kb on - strand, within A4249_RS04120at 856.329 kb on - strand, within A4249_RS04120at 856.329 kb on - strand, within A4249_RS04120at 856.329 kb on - strand, within A4249_RS04120at 856.329 kb on - strand, within A4249_RS04120at 856.329 kb on - strand, within A4249_RS04120at 856.329 kb on - strand, within A4249_RS04120at 856.329 kb on - strand, within A4249_RS04120at 856.329 kb on - strand, within A4249_RS04120at 856.329 kb on - strand, within A4249_RS04120at 856.329 kb on - strand, within A4249_RS04120at 856.832 kb on + strand, within A4249_RS04120at 856.833 kb on - strand, within A4249_RS04120at 856.861 kb on - strand, within A4249_RS04120at 856.861 kb on - strand, within A4249_RS04120at 856.861 kb on - strand, within A4249_RS04120at 856.861 kb on - strand, within A4249_RS04120at 856.878 kb on + strand, within A4249_RS04120at 856.878 kb on + strand, within A4249_RS04120at 856.879 kb on - strand, within A4249_RS04120at 856.879 kb on - strand, within A4249_RS04120at 856.879 kb on - strand, within A4249_RS04120at 856.901 kb on + strand, within A4249_RS04120at 856.902 kb on - strand, within A4249_RS04120

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C); 30C
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854,636 + A4249_RS04110 0.59 +0.2
854,636 + A4249_RS04110 0.59 +2.2
854,636 + A4249_RS04110 0.59 +1.8
854,636 + A4249_RS04110 0.59 +0.0
854,637 - A4249_RS04110 0.59 -0.1
854,802 + A4249_RS04110 0.68 -0.1
854,802 + A4249_RS04110 0.68 -2.1
854,802 + A4249_RS04110 0.68 -0.8
854,802 + A4249_RS04110 0.68 +1.2
854,802 + A4249_RS04110 0.68 +0.1
854,803 - A4249_RS04110 0.68 -2.0
854,803 - A4249_RS04110 0.68 +0.8
854,806 + A4249_RS04110 0.68 +1.0
854,806 + A4249_RS04110 0.68 -0.7
854,807 - A4249_RS04110 0.68 +2.2
854,807 - A4249_RS04110 0.68 -1.5
854,807 - A4249_RS04110 0.68 +1.4
854,827 + A4249_RS04110 0.69 -1.4
854,827 + A4249_RS04110 0.69 -0.2
854,827 + A4249_RS04110 0.69 -2.3
854,827 + A4249_RS04110 0.69 +0.1
854,827 + A4249_RS04110 0.69 -0.2
854,827 + A4249_RS04110 0.69 -0.3
854,827 + A4249_RS04110 0.69 +0.8
854,828 - A4249_RS04110 0.69 -0.6
854,828 - A4249_RS04110 0.69 +1.2
854,828 - A4249_RS04110 0.69 -0.5
854,828 - A4249_RS04110 0.69 +0.6
854,828 - A4249_RS04110 0.69 +0.3
854,828 - A4249_RS04110 0.69 +0.5
855,266 + +0.2
855,267 - +1.2
855,463 + +1.5
855,463 + -0.6
855,463 + -1.0
855,463 + -1.0
855,463 + +1.6
855,463 + +1.0
855,463 + +0.9
855,463 + +0.2
855,464 - +0.9
855,464 - +0.6
855,464 - -0.4
855,651 + A4249_RS04115 0.28 -1.8
855,651 + A4249_RS04115 0.28 -0.6
855,721 - A4249_RS04115 0.43 +0.6
855,721 - A4249_RS04115 0.43 -0.3
855,741 + A4249_RS04115 0.47 +0.6
855,741 + A4249_RS04115 0.47 -0.8
855,742 - A4249_RS04115 0.47 -0.3
855,742 - A4249_RS04115 0.47 +0.4
855,742 - A4249_RS04115 0.47 -0.6
855,742 - A4249_RS04115 0.47 +0.3
855,771 + A4249_RS04115 0.53 -0.2
855,771 + A4249_RS04115 0.53 +0.4
855,771 + A4249_RS04115 0.53 -0.3
855,771 + A4249_RS04115 0.53 -0.4
855,771 + A4249_RS04115 0.53 -0.3
855,771 + A4249_RS04115 0.53 -2.5
855,772 - A4249_RS04115 0.53 +1.8
855,786 + A4249_RS04115 0.56 +0.4
855,786 + A4249_RS04115 0.56 -0.8
855,786 + A4249_RS04115 0.56 +0.1
855,786 + A4249_RS04115 0.56 +1.1
855,786 + A4249_RS04115 0.56 -1.4
855,787 - A4249_RS04115 0.56 +0.4
855,787 - A4249_RS04115 0.56 +1.3
855,787 - A4249_RS04115 0.56 +0.6
855,787 - A4249_RS04115 0.56 +0.4
855,787 - A4249_RS04115 0.56 -1.0
855,787 - A4249_RS04115 0.56 -0.1
855,805 - A4249_RS04115 0.60 +0.4
855,825 + A4249_RS04115 0.64 +0.4
855,825 + A4249_RS04115 0.64 -0.5
855,825 + A4249_RS04115 0.64 +1.1
855,825 + A4249_RS04115 0.64 +1.9
855,825 + A4249_RS04115 0.64 -0.2
855,825 + A4249_RS04115 0.64 -1.8
855,825 + A4249_RS04115 0.64 -0.4
855,825 + A4249_RS04115 0.64 +1.0
855,826 - A4249_RS04115 0.64 +1.2
855,826 - A4249_RS04115 0.64 -1.1
855,826 - A4249_RS04115 0.64 -0.6
855,826 - A4249_RS04115 0.64 +1.2
855,826 - A4249_RS04115 0.64 -0.6
855,826 - A4249_RS04115 0.64 +1.6
855,826 - A4249_RS04115 0.64 -0.3
855,826 - A4249_RS04115 0.64 -0.2
855,846 + A4249_RS04115 0.68 +0.0
855,847 - A4249_RS04115 0.68 +0.3
855,847 - A4249_RS04115 0.68 +0.2
855,864 + A4249_RS04115 0.72 -0.8
855,864 + A4249_RS04115 0.72 -0.0
855,864 + A4249_RS04115 0.72 -1.1
855,864 + A4249_RS04115 0.72 +0.2
855,864 + A4249_RS04115 0.72 -0.2
855,864 + A4249_RS04115 0.72 +0.4
855,864 + A4249_RS04115 0.72 +0.2
855,865 - A4249_RS04115 0.72 +0.7
855,865 - A4249_RS04115 0.72 +0.6
855,865 - A4249_RS04115 0.72 +0.2
855,865 - A4249_RS04115 0.72 +1.9
855,879 + A4249_RS04115 0.75 +1.0
855,879 + A4249_RS04115 0.75 -1.9
855,879 + A4249_RS04115 0.75 +0.6
855,879 + A4249_RS04115 0.75 +0.1
855,879 + A4249_RS04115 0.75 +1.2
855,879 + A4249_RS04115 0.75 -0.2
855,880 - A4249_RS04115 0.75 -2.1
855,880 - A4249_RS04115 0.75 +1.7
855,880 - A4249_RS04115 0.75 -0.0
855,880 - A4249_RS04115 0.75 -2.9
855,880 - A4249_RS04115 0.75 -0.8
855,880 - A4249_RS04115 0.75 -0.1
855,881 + A4249_RS04115 0.75 -0.3
855,881 + A4249_RS04115 0.75 -0.1
855,882 - A4249_RS04115 0.75 -0.0
855,916 - A4249_RS04115 0.82 +0.5
855,921 + A4249_RS04115 0.83 +0.7
855,921 + A4249_RS04115 0.83 +0.8
855,921 + A4249_RS04115 0.83 +1.6
855,921 + A4249_RS04115 0.83 -0.9
855,921 + A4249_RS04115 0.83 +0.7
855,921 + A4249_RS04115 0.83 -0.8
855,921 + A4249_RS04115 0.83 -3.1
855,922 - A4249_RS04115 0.83 +1.1
855,922 - A4249_RS04115 0.83 +1.1
855,922 - A4249_RS04115 0.83 -0.7
855,922 - A4249_RS04115 0.83 +0.1
855,922 - A4249_RS04115 0.83 -0.2
855,922 - A4249_RS04115 0.83 -0.8
855,922 - A4249_RS04115 0.83 +2.7
855,922 - A4249_RS04115 0.83 +0.0
855,922 - A4249_RS04115 0.83 +0.1
856,021 + -0.4
856,021 + +1.2
856,021 + +0.7
856,181 + -2.1
856,182 - -0.6
856,322 + A4249_RS04120 0.13 -0.2
856,322 + A4249_RS04120 0.13 +0.8
856,323 - A4249_RS04120 0.13 +0.2
856,323 - A4249_RS04120 0.13 -0.4
856,328 + A4249_RS04120 0.13 -0.0
856,328 + A4249_RS04120 0.13 -0.5
856,328 + A4249_RS04120 0.13 -1.8
856,328 + A4249_RS04120 0.13 +0.1
856,328 + A4249_RS04120 0.13 +1.2
856,328 + A4249_RS04120 0.13 -0.8
856,328 + A4249_RS04120 0.13 +1.2
856,328 + A4249_RS04120 0.13 +0.5
856,328 + A4249_RS04120 0.13 -2.8
856,328 + A4249_RS04120 0.13 +1.2
856,328 + A4249_RS04120 0.13 -0.1
856,328 + A4249_RS04120 0.13 +0.1
856,328 + A4249_RS04120 0.13 +0.7
856,328 + A4249_RS04120 0.13 +0.4
856,328 + A4249_RS04120 0.13 +0.9
856,328 + A4249_RS04120 0.13 -0.6
856,329 - A4249_RS04120 0.13 +1.5
856,329 - A4249_RS04120 0.13 -0.6
856,329 - A4249_RS04120 0.13 +0.2
856,329 - A4249_RS04120 0.13 +0.1
856,329 - A4249_RS04120 0.13 -1.1
856,329 - A4249_RS04120 0.13 -1.1
856,329 - A4249_RS04120 0.13 +1.3
856,329 - A4249_RS04120 0.13 -0.5
856,329 - A4249_RS04120 0.13 +0.1
856,329 - A4249_RS04120 0.13 +0.2
856,329 - A4249_RS04120 0.13 -0.9
856,329 - A4249_RS04120 0.13 -1.1
856,329 - A4249_RS04120 0.13 -3.1
856,329 - A4249_RS04120 0.13 +0.1
856,329 - A4249_RS04120 0.13 +0.6
856,329 - A4249_RS04120 0.13 -0.3
856,329 - A4249_RS04120 0.13 -0.4
856,832 + A4249_RS04120 0.43 -0.7
856,833 - A4249_RS04120 0.43 +0.7
856,861 - A4249_RS04120 0.45 -0.5
856,861 - A4249_RS04120 0.45 +0.5
856,861 - A4249_RS04120 0.45 -2.1
856,861 - A4249_RS04120 0.45 +1.6
856,878 + A4249_RS04120 0.46 +0.4
856,878 + A4249_RS04120 0.46 -1.3
856,879 - A4249_RS04120 0.46 +0.2
856,879 - A4249_RS04120 0.46 -0.3
856,879 - A4249_RS04120 0.46 +0.0
856,901 + A4249_RS04120 0.47 -0.7
856,902 - A4249_RS04120 0.47 -0.5

Or see this region's nucleotide sequence