Experiment: D-Glucose (C); 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS02210 and A4249_RS02215 overlap by 6 nucleotides A4249_RS02215 and A4249_RS02220 overlap by 1 nucleotides A4249_RS02220 and A4249_RS02225 are separated by 39 nucleotides A4249_RS02225 and A4249_RS02230 are separated by 39 nucleotides
A4249_RS02210: A4249_RS02210 - gamma carbonic anhydrase family protein, at 466,741 to 467,268
_RS02210
A4249_RS02215: A4249_RS02215 - bifunctional riboflavin kinase/FAD synthetase, at 467,263 to 468,195
_RS02215
A4249_RS02220: A4249_RS02220 - MaoC family dehydratase, at 468,195 to 468,656
_RS02220
A4249_RS02225: A4249_RS02225 - TIGR01459 family HAD-type hydrolase, at 468,696 to 469,565
_RS02225
A4249_RS02230: A4249_RS02230 - EAL domain-containing protein, at 469,605 to 470,879
_RS02230
Position (kb) 468
469 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 467.221 kb on + strand at 467.221 kb on + strand at 467.221 kb on + strand at 467.221 kb on + strand at 467.221 kb on + strand at 467.221 kb on + strand at 467.221 kb on + strand at 467.221 kb on + strand at 467.221 kb on + strand at 467.221 kb on + strand at 467.221 kb on + strand at 467.221 kb on + strand at 467.221 kb on + strand at 467.221 kb on + strand at 467.221 kb on + strand at 467.221 kb on + strand at 467.222 kb on - strand at 467.222 kb on - strand at 467.222 kb on - strand at 467.222 kb on - strand at 467.222 kb on - strand at 467.222 kb on - strand at 467.222 kb on - strand at 467.222 kb on - strand at 467.222 kb on - strand at 467.222 kb on - strand at 467.222 kb on - strand at 467.264 kb on + strand at 467.264 kb on + strand at 467.264 kb on + strand at 467.265 kb on - strand at 467.265 kb on - strand at 468.389 kb on + strand, within A4249_RS02220 at 468.389 kb on + strand, within A4249_RS02220 at 468.390 kb on - strand, within A4249_RS02220 at 468.392 kb on - strand, within A4249_RS02220 at 468.392 kb on - strand, within A4249_RS02220 at 468.392 kb on - strand, within A4249_RS02220 at 468.392 kb on - strand, within A4249_RS02220 at 468.392 kb on - strand, within A4249_RS02220 at 468.620 kb on - strand at 468.620 kb on - strand at 468.620 kb on - strand at 468.698 kb on - strand at 468.698 kb on - strand at 468.698 kb on - strand at 468.731 kb on - strand at 469.009 kb on + strand, within A4249_RS02225 at 469.130 kb on - strand, within A4249_RS02225 at 469.516 kb on + strand at 469.606 kb on + strand at 469.606 kb on + strand at 469.607 kb on - strand at 469.607 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 30C remove 467,221 + -0.5 467,221 + +0.3 467,221 + -0.7 467,221 + -0.1 467,221 + -0.2 467,221 + +0.0 467,221 + +1.0 467,221 + +0.3 467,221 + -1.8 467,221 + -0.0 467,221 + +0.0 467,221 + +1.7 467,221 + -0.8 467,221 + -0.1 467,221 + -0.5 467,221 + -0.4 467,222 - -0.2 467,222 - -2.0 467,222 - -0.1 467,222 - -1.0 467,222 - +2.1 467,222 - +0.2 467,222 - -0.2 467,222 - +0.4 467,222 - -0.4 467,222 - -1.1 467,222 - +0.1 467,264 + +0.9 467,264 + +0.1 467,264 + -1.4 467,265 - -2.0 467,265 - -2.3 468,389 + A4249_RS02220 0.42 -1.7 468,389 + A4249_RS02220 0.42 -1.3 468,390 - A4249_RS02220 0.42 -2.5 468,392 - A4249_RS02220 0.43 -2.8 468,392 - A4249_RS02220 0.43 -3.3 468,392 - A4249_RS02220 0.43 -1.4 468,392 - A4249_RS02220 0.43 -2.0 468,392 - A4249_RS02220 0.43 -1.1 468,620 - -1.8 468,620 - -0.1 468,620 - -2.6 468,698 - -1.7 468,698 - -1.7 468,698 - +1.0 468,731 - +0.2 469,009 + A4249_RS02225 0.36 -0.1 469,130 - A4249_RS02225 0.50 -0.5 469,516 + +0.7 469,606 + -0.7 469,606 + +0.3 469,607 - -1.0 469,607 - -0.7
Or see this region's nucleotide sequence