Experiment: D-Glucose (C); 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS01305 and A4249_RS01310 are separated by 149 nucleotides A4249_RS01310 and A4249_RS01315 are separated by 237 nucleotides A4249_RS01315 and A4249_RS01320 overlap by 8 nucleotides A4249_RS01320 and A4249_RS01325 overlap by 4 nucleotides
A4249_RS01305: A4249_RS01305 - phage terminase large subunit family protein, at 248,798 to 250,666
_RS01305
A4249_RS01310: A4249_RS01310 - hypothetical protein, at 250,816 to 251,382
_RS01310
A4249_RS01315: A4249_RS01315 - hypothetical protein, at 251,620 to 252,417
_RS01315
A4249_RS01320: A4249_RS01320 - hypothetical protein, at 252,410 to 253,387
_RS01320
A4249_RS01325: A4249_RS01325 - hypothetical protein, at 253,384 to 253,725
_RS01325
Position (kb) 251
252
253 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 250.647 kb on + strand at 250.648 kb on - strand at 250.648 kb on - strand at 250.648 kb on - strand at 250.819 kb on + strand at 250.819 kb on + strand at 250.819 kb on + strand at 250.819 kb on + strand at 250.819 kb on + strand at 250.819 kb on + strand at 250.820 kb on - strand at 250.820 kb on - strand at 250.820 kb on - strand at 250.820 kb on - strand at 250.918 kb on + strand, within A4249_RS01310 at 250.918 kb on + strand, within A4249_RS01310 at 250.918 kb on + strand, within A4249_RS01310 at 250.918 kb on + strand, within A4249_RS01310 at 250.918 kb on + strand, within A4249_RS01310 at 250.919 kb on - strand, within A4249_RS01310 at 250.919 kb on - strand, within A4249_RS01310 at 250.919 kb on - strand, within A4249_RS01310 at 251.103 kb on + strand, within A4249_RS01310 at 251.104 kb on - strand, within A4249_RS01310 at 251.344 kb on + strand at 251.344 kb on + strand at 251.344 kb on + strand at 251.344 kb on + strand at 251.344 kb on + strand at 251.344 kb on + strand at 251.344 kb on + strand at 251.344 kb on + strand at 251.344 kb on + strand at 251.344 kb on + strand at 251.344 kb on + strand at 251.344 kb on + strand at 251.344 kb on + strand at 251.344 kb on + strand at 251.345 kb on - strand at 251.345 kb on - strand at 251.345 kb on - strand at 251.345 kb on - strand at 251.345 kb on - strand at 251.345 kb on - strand at 251.345 kb on - strand at 251.345 kb on - strand at 251.345 kb on - strand at 251.345 kb on - strand at 251.345 kb on - strand at 251.348 kb on + strand at 251.348 kb on + strand at 251.348 kb on + strand at 251.348 kb on + strand at 251.348 kb on + strand at 251.348 kb on + strand at 251.348 kb on + strand at 251.348 kb on + strand at 251.348 kb on + strand at 251.348 kb on + strand at 251.348 kb on + strand at 251.348 kb on + strand at 251.348 kb on + strand at 251.348 kb on + strand at 251.348 kb on + strand at 251.349 kb on - strand at 251.349 kb on - strand at 251.349 kb on - strand at 251.349 kb on - strand at 251.349 kb on - strand at 251.349 kb on - strand at 251.349 kb on - strand at 251.349 kb on - strand at 251.349 kb on - strand at 251.349 kb on - strand at 251.349 kb on - strand at 251.349 kb on - strand at 251.349 kb on - strand at 251.349 kb on - strand at 251.349 kb on - strand at 251.349 kb on - strand at 251.349 kb on - strand at 251.349 kb on - strand at 251.349 kb on - strand at 251.349 kb on - strand at 251.349 kb on - strand at 251.349 kb on - strand at 251.349 kb on - strand at 251.349 kb on - strand at 251.456 kb on - strand at 251.456 kb on - strand at 251.464 kb on + strand at 251.465 kb on - strand at 251.483 kb on + strand at 251.483 kb on + strand at 251.484 kb on - strand at 251.484 kb on - strand at 251.484 kb on - strand at 251.600 kb on + strand at 251.600 kb on + strand at 251.600 kb on + strand at 251.600 kb on + strand at 251.600 kb on + strand at 251.601 kb on - strand at 251.601 kb on - strand at 251.601 kb on - strand at 251.601 kb on - strand at 251.601 kb on - strand at 251.601 kb on - strand at 251.601 kb on - strand at 251.621 kb on + strand at 251.621 kb on + strand at 251.621 kb on + strand at 251.622 kb on - strand at 251.622 kb on - strand at 251.622 kb on - strand at 251.622 kb on - strand at 251.658 kb on + strand at 251.658 kb on + strand at 251.658 kb on + strand at 251.658 kb on + strand at 251.658 kb on + strand at 251.658 kb on + strand at 251.659 kb on - strand at 251.659 kb on - strand at 251.659 kb on - strand at 251.659 kb on - strand at 251.659 kb on - strand at 251.659 kb on - strand at 251.659 kb on - strand at 251.659 kb on - strand at 251.712 kb on + strand, within A4249_RS01315 at 251.712 kb on + strand, within A4249_RS01315 at 251.713 kb on - strand, within A4249_RS01315 at 251.713 kb on - strand, within A4249_RS01315 at 251.930 kb on + strand, within A4249_RS01315 at 251.930 kb on + strand, within A4249_RS01315 at 252.411 kb on + strand at 252.411 kb on + strand at 252.555 kb on + strand, within A4249_RS01320 at 252.555 kb on + strand, within A4249_RS01320 at 252.555 kb on + strand, within A4249_RS01320 at 252.555 kb on + strand, within A4249_RS01320 at 252.555 kb on + strand, within A4249_RS01320 at 252.555 kb on + strand, within A4249_RS01320 at 252.556 kb on - strand, within A4249_RS01320 at 252.556 kb on - strand, within A4249_RS01320 at 252.556 kb on - strand, within A4249_RS01320 at 252.556 kb on - strand, within A4249_RS01320 at 252.556 kb on - strand, within A4249_RS01320 at 252.556 kb on - strand, within A4249_RS01320 at 252.556 kb on - strand, within A4249_RS01320 at 252.910 kb on + strand, within A4249_RS01320 at 252.922 kb on + strand, within A4249_RS01320 at 252.922 kb on + strand, within A4249_RS01320 at 252.922 kb on + strand, within A4249_RS01320 at 252.922 kb on + strand, within A4249_RS01320 at 252.923 kb on - strand, within A4249_RS01320 at 252.923 kb on - strand, within A4249_RS01320 at 252.923 kb on - strand, within A4249_RS01320 at 252.935 kb on + strand, within A4249_RS01320 at 252.935 kb on + strand, within A4249_RS01320 at 252.935 kb on + strand, within A4249_RS01320 at 252.935 kb on + strand, within A4249_RS01320 at 252.935 kb on + strand, within A4249_RS01320 at 252.936 kb on - strand, within A4249_RS01320 at 252.936 kb on - strand, within A4249_RS01320 at 253.107 kb on - strand, within A4249_RS01320 at 253.119 kb on + strand, within A4249_RS01320 at 253.119 kb on + strand, within A4249_RS01320 at 253.119 kb on + strand, within A4249_RS01320 at 253.120 kb on - strand, within A4249_RS01320 at 253.120 kb on - strand, within A4249_RS01320 at 253.120 kb on - strand, within A4249_RS01320 at 253.122 kb on + strand, within A4249_RS01320 at 253.122 kb on + strand, within A4249_RS01320 at 253.123 kb on - strand, within A4249_RS01320 at 253.123 kb on - strand, within A4249_RS01320 at 253.123 kb on - strand, within A4249_RS01320 at 253.123 kb on - strand, within A4249_RS01320 at 253.123 kb on - strand, within A4249_RS01320 at 253.123 kb on - strand, within A4249_RS01320 at 253.129 kb on - strand, within A4249_RS01320 at 253.129 kb on - strand, within A4249_RS01320 at 253.284 kb on + strand, within A4249_RS01320 at 253.284 kb on + strand, within A4249_RS01320 at 253.284 kb on + strand, within A4249_RS01320 at 253.284 kb on + strand, within A4249_RS01320 at 253.284 kb on + strand, within A4249_RS01320 at 253.284 kb on + strand, within A4249_RS01320 at 253.284 kb on + strand, within A4249_RS01320 at 253.285 kb on - strand, within A4249_RS01320 at 253.285 kb on - strand, within A4249_RS01320 at 253.285 kb on - strand, within A4249_RS01320 at 253.285 kb on - strand, within A4249_RS01320 at 253.285 kb on - strand, within A4249_RS01320 at 253.285 kb on - strand, within A4249_RS01320 at 253.285 kb on - strand, within A4249_RS01320 at 253.285 kb on - strand, within A4249_RS01320 at 253.285 kb on - strand, within A4249_RS01320
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 30C remove 250,647 + +0.9 250,648 - +1.0 250,648 - -0.7 250,648 - +0.6 250,819 + -1.2 250,819 + -0.3 250,819 + -0.9 250,819 + -1.7 250,819 + +0.9 250,819 + -1.3 250,820 - -1.1 250,820 - -0.3 250,820 - +0.5 250,820 - +1.3 250,918 + A4249_RS01310 0.18 +0.2 250,918 + A4249_RS01310 0.18 -0.7 250,918 + A4249_RS01310 0.18 +0.6 250,918 + A4249_RS01310 0.18 -1.3 250,918 + A4249_RS01310 0.18 +0.9 250,919 - A4249_RS01310 0.18 -0.5 250,919 - A4249_RS01310 0.18 +0.1 250,919 - A4249_RS01310 0.18 +2.2 251,103 + A4249_RS01310 0.51 -0.0 251,104 - A4249_RS01310 0.51 +0.3 251,344 + +1.1 251,344 + +1.6 251,344 + -0.8 251,344 + -0.1 251,344 + -1.6 251,344 + +0.7 251,344 + +0.1 251,344 + -1.1 251,344 + +0.9 251,344 + -2.0 251,344 + -0.7 251,344 + +0.1 251,344 + -1.0 251,344 + -0.5 251,345 - -3.0 251,345 - +1.3 251,345 - +0.3 251,345 - +1.2 251,345 - -1.3 251,345 - -2.5 251,345 - +1.3 251,345 - -0.9 251,345 - +1.0 251,345 - +1.9 251,345 - -0.3 251,348 + +0.2 251,348 + -0.5 251,348 + -0.6 251,348 + +0.6 251,348 + +2.0 251,348 + -0.1 251,348 + -0.4 251,348 + +0.1 251,348 + -0.3 251,348 + +0.7 251,348 + -1.0 251,348 + +0.3 251,348 + +1.8 251,348 + +1.4 251,348 + +0.3 251,349 - +0.4 251,349 - -0.3 251,349 - -1.0 251,349 - +0.6 251,349 - -2.9 251,349 - +1.2 251,349 - +1.5 251,349 - -0.1 251,349 - +0.3 251,349 - +0.5 251,349 - -0.7 251,349 - -0.6 251,349 - +1.7 251,349 - -3.0 251,349 - -1.5 251,349 - -1.9 251,349 - +0.5 251,349 - -0.3 251,349 - -0.0 251,349 - -0.0 251,349 - -1.1 251,349 - +0.6 251,349 - -0.7 251,349 - -0.3 251,456 - +1.0 251,456 - +0.8 251,464 + -0.6 251,465 - -0.2 251,483 + +0.1 251,483 + +0.7 251,484 - +0.1 251,484 - +0.2 251,484 - -0.9 251,600 + +1.9 251,600 + -1.5 251,600 + +1.0 251,600 + +0.3 251,600 + +0.2 251,601 - -0.5 251,601 - -0.4 251,601 - -0.7 251,601 - -0.4 251,601 - -0.8 251,601 - -0.2 251,601 - -0.1 251,621 + +0.1 251,621 + +0.4 251,621 + +0.6 251,622 - +0.3 251,622 - +0.7 251,622 - -0.7 251,622 - -1.0 251,658 + -0.4 251,658 + -2.0 251,658 + -0.2 251,658 + +1.6 251,658 + +0.2 251,658 + -0.0 251,659 - -1.8 251,659 - -1.7 251,659 - +0.2 251,659 - -0.7 251,659 - -0.0 251,659 - -2.9 251,659 - -2.0 251,659 - +1.3 251,712 + A4249_RS01315 0.12 -1.2 251,712 + A4249_RS01315 0.12 -0.7 251,713 - A4249_RS01315 0.12 -0.7 251,713 - A4249_RS01315 0.12 -1.7 251,930 + A4249_RS01315 0.39 +0.3 251,930 + A4249_RS01315 0.39 -1.9 252,411 + -2.9 252,411 + +0.3 252,555 + A4249_RS01320 0.15 +0.3 252,555 + A4249_RS01320 0.15 -0.2 252,555 + A4249_RS01320 0.15 +0.2 252,555 + A4249_RS01320 0.15 -0.7 252,555 + A4249_RS01320 0.15 -2.0 252,555 + A4249_RS01320 0.15 +1.2 252,556 - A4249_RS01320 0.15 -0.1 252,556 - A4249_RS01320 0.15 +0.2 252,556 - A4249_RS01320 0.15 +0.5 252,556 - A4249_RS01320 0.15 +1.1 252,556 - A4249_RS01320 0.15 -1.4 252,556 - A4249_RS01320 0.15 -0.0 252,556 - A4249_RS01320 0.15 +0.3 252,910 + A4249_RS01320 0.51 +0.9 252,922 + A4249_RS01320 0.52 -0.3 252,922 + A4249_RS01320 0.52 -2.0 252,922 + A4249_RS01320 0.52 -0.3 252,922 + A4249_RS01320 0.52 +0.8 252,923 - A4249_RS01320 0.52 -0.7 252,923 - A4249_RS01320 0.52 +0.1 252,923 - A4249_RS01320 0.52 +1.3 252,935 + A4249_RS01320 0.54 -0.6 252,935 + A4249_RS01320 0.54 -1.5 252,935 + A4249_RS01320 0.54 +0.4 252,935 + A4249_RS01320 0.54 -1.0 252,935 + A4249_RS01320 0.54 +0.3 252,936 - A4249_RS01320 0.54 +0.5 252,936 - A4249_RS01320 0.54 +0.6 253,107 - A4249_RS01320 0.71 +0.1 253,119 + A4249_RS01320 0.72 +1.2 253,119 + A4249_RS01320 0.72 -0.5 253,119 + A4249_RS01320 0.72 -0.4 253,120 - A4249_RS01320 0.73 -1.6 253,120 - A4249_RS01320 0.73 -0.6 253,120 - A4249_RS01320 0.73 -0.2 253,122 + A4249_RS01320 0.73 +0.0 253,122 + A4249_RS01320 0.73 -0.7 253,123 - A4249_RS01320 0.73 +0.2 253,123 - A4249_RS01320 0.73 +1.9 253,123 - A4249_RS01320 0.73 -1.3 253,123 - A4249_RS01320 0.73 +1.5 253,123 - A4249_RS01320 0.73 +0.6 253,123 - A4249_RS01320 0.73 +0.1 253,129 - A4249_RS01320 0.74 -0.8 253,129 - A4249_RS01320 0.74 -0.3 253,284 + A4249_RS01320 0.89 -0.5 253,284 + A4249_RS01320 0.89 +0.6 253,284 + A4249_RS01320 0.89 +0.5 253,284 + A4249_RS01320 0.89 +3.2 253,284 + A4249_RS01320 0.89 +0.7 253,284 + A4249_RS01320 0.89 +0.3 253,284 + A4249_RS01320 0.89 +0.3 253,285 - A4249_RS01320 0.89 +0.3 253,285 - A4249_RS01320 0.89 -0.0 253,285 - A4249_RS01320 0.89 -2.0 253,285 - A4249_RS01320 0.89 +0.1 253,285 - A4249_RS01320 0.89 +0.3 253,285 - A4249_RS01320 0.89 +0.1 253,285 - A4249_RS01320 0.89 -1.4 253,285 - A4249_RS01320 0.89 -1.9 253,285 - A4249_RS01320 0.89 -0.2
Or see this region's nucleotide sequence