Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS00835

Experiment: D-Glucose (C); 30C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS00825 and A4249_RS00830 are separated by 94 nucleotidesA4249_RS00830 and A4249_RS00835 are separated by 2 nucleotidesA4249_RS00835 and A4249_RS00840 overlap by 4 nucleotides A4249_RS00825: A4249_RS00825 - cytochrome P450, at 154,619 to 156,022 _RS00825 A4249_RS00830: A4249_RS00830 - hypothetical protein, at 156,117 to 156,578 _RS00830 A4249_RS00835: A4249_RS00835 - DUF305 domain-containing protein, at 156,581 to 157,030 _RS00835 A4249_RS00840: A4249_RS00840 - phosphoribosylformylglycinamidine synthase subunit PurL, at 157,027 to 159,255 _RS00840 Position (kb) 156 157 158Strain fitness (log2 ratio) -2 -1 0 1at 155.787 kb on + strand, within A4249_RS00825at 155.787 kb on + strand, within A4249_RS00825at 155.787 kb on + strand, within A4249_RS00825at 155.787 kb on + strand, within A4249_RS00825at 155.787 kb on + strand, within A4249_RS00825at 155.787 kb on + strand, within A4249_RS00825at 155.787 kb on + strand, within A4249_RS00825at 155.787 kb on + strand, within A4249_RS00825at 155.787 kb on + strand, within A4249_RS00825at 155.787 kb on + strand, within A4249_RS00825at 155.788 kb on - strand, within A4249_RS00825at 155.788 kb on - strand, within A4249_RS00825at 155.788 kb on - strand, within A4249_RS00825at 155.788 kb on - strand, within A4249_RS00825at 155.788 kb on - strand, within A4249_RS00825at 155.788 kb on - strand, within A4249_RS00825at 155.788 kb on - strand, within A4249_RS00825at 155.788 kb on - strand, within A4249_RS00825at 155.788 kb on - strand, within A4249_RS00825at 156.164 kb on + strand, within A4249_RS00830at 156.164 kb on + strand, within A4249_RS00830at 156.164 kb on + strand, within A4249_RS00830at 156.165 kb on - strand, within A4249_RS00830at 156.368 kb on + strand, within A4249_RS00830at 156.368 kb on + strand, within A4249_RS00830at 156.753 kb on + strand, within A4249_RS00835at 156.753 kb on + strand, within A4249_RS00835at 156.753 kb on + strand, within A4249_RS00835at 156.753 kb on + strand, within A4249_RS00835at 156.753 kb on + strand, within A4249_RS00835at 156.753 kb on + strand, within A4249_RS00835at 156.753 kb on + strand, within A4249_RS00835at 156.754 kb on - strand, within A4249_RS00835at 156.754 kb on - strand, within A4249_RS00835at 156.754 kb on - strand, within A4249_RS00835at 156.754 kb on - strand, within A4249_RS00835at 156.754 kb on - strand, within A4249_RS00835

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C); 30C
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155,787 + A4249_RS00825 0.83 +1.0
155,787 + A4249_RS00825 0.83 +1.0
155,787 + A4249_RS00825 0.83 -0.6
155,787 + A4249_RS00825 0.83 +1.4
155,787 + A4249_RS00825 0.83 -0.6
155,787 + A4249_RS00825 0.83 +1.2
155,787 + A4249_RS00825 0.83 +0.0
155,787 + A4249_RS00825 0.83 +0.8
155,787 + A4249_RS00825 0.83 +0.7
155,787 + A4249_RS00825 0.83 +0.4
155,788 - A4249_RS00825 0.83 -1.9
155,788 - A4249_RS00825 0.83 -0.4
155,788 - A4249_RS00825 0.83 -1.8
155,788 - A4249_RS00825 0.83 -1.4
155,788 - A4249_RS00825 0.83 +0.6
155,788 - A4249_RS00825 0.83 +0.9
155,788 - A4249_RS00825 0.83 -1.0
155,788 - A4249_RS00825 0.83 +0.1
155,788 - A4249_RS00825 0.83 -1.2
156,164 + A4249_RS00830 0.10 -0.6
156,164 + A4249_RS00830 0.10 -0.6
156,164 + A4249_RS00830 0.10 -0.6
156,165 - A4249_RS00830 0.10 +0.3
156,368 + A4249_RS00830 0.54 +0.9
156,368 + A4249_RS00830 0.54 +0.4
156,753 + A4249_RS00835 0.38 +0.4
156,753 + A4249_RS00835 0.38 +0.6
156,753 + A4249_RS00835 0.38 -0.6
156,753 + A4249_RS00835 0.38 +1.3
156,753 + A4249_RS00835 0.38 -0.2
156,753 + A4249_RS00835 0.38 -0.6
156,753 + A4249_RS00835 0.38 -0.5
156,754 - A4249_RS00835 0.38 -0.1
156,754 - A4249_RS00835 0.38 +1.2
156,754 - A4249_RS00835 0.38 -0.5
156,754 - A4249_RS00835 0.38 -2.0
156,754 - A4249_RS00835 0.38 +0.4

Or see this region's nucleotide sequence