Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS00715

Experiment: D-Glucose (C); 30C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS00705 and A4249_RS00710 are separated by 70 nucleotidesA4249_RS00710 and A4249_RS00715 are separated by 128 nucleotidesA4249_RS00715 and A4249_RS00720 overlap by 11 nucleotidesA4249_RS00720 and A4249_RS00725 are separated by 70 nucleotides A4249_RS00705: A4249_RS00705 - glutathione S-transferase, at 129,562 to 130,227 _RS00705 A4249_RS00710: A4249_RS00710 - hypothetical protein, at 130,298 to 130,498 _RS00710 A4249_RS00715: A4249_RS00715 - cation:dicarboxylase symporter family transporter, at 130,627 to 131,925 _RS00715 A4249_RS00720: A4249_RS00720 - DUF1294 domain-containing protein, at 131,915 to 132,193 _RS00720 A4249_RS00725: A4249_RS00725 - carbamoyl-phosphate synthase large subunit, at 132,264 to 135,563 _RS00725 Position (kb) 130 131 132Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 129.890 kb on - strand, within A4249_RS00705at 129.890 kb on - strand, within A4249_RS00705at 129.890 kb on - strand, within A4249_RS00705at 129.929 kb on + strand, within A4249_RS00705at 129.929 kb on + strand, within A4249_RS00705at 129.929 kb on + strand, within A4249_RS00705at 129.929 kb on + strand, within A4249_RS00705at 129.929 kb on + strand, within A4249_RS00705at 129.930 kb on - strand, within A4249_RS00705at 129.930 kb on - strand, within A4249_RS00705at 129.930 kb on - strand, within A4249_RS00705at 129.930 kb on - strand, within A4249_RS00705at 129.930 kb on - strand, within A4249_RS00705at 129.930 kb on - strand, within A4249_RS00705at 129.941 kb on + strand, within A4249_RS00705at 129.941 kb on + strand, within A4249_RS00705at 129.941 kb on + strand, within A4249_RS00705at 129.942 kb on - strand, within A4249_RS00705at 129.942 kb on - strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 130.002 kb on + strand, within A4249_RS00705at 130.002 kb on + strand, within A4249_RS00705at 130.002 kb on + strand, within A4249_RS00705at 130.003 kb on - strand, within A4249_RS00705at 130.013 kb on + strand, within A4249_RS00705at 130.013 kb on + strand, within A4249_RS00705at 130.014 kb on - strand, within A4249_RS00705at 130.014 kb on - strand, within A4249_RS00705at 130.014 kb on - strand, within A4249_RS00705at 130.014 kb on - strand, within A4249_RS00705at 130.014 kb on - strand, within A4249_RS00705at 130.136 kb on + strand, within A4249_RS00705at 130.151 kb on + strand, within A4249_RS00705at 130.151 kb on + strand, within A4249_RS00705at 130.152 kb on - strand, within A4249_RS00705at 130.152 kb on - strand, within A4249_RS00705at 130.152 kb on - strand, within A4249_RS00705at 130.152 kb on - strand, within A4249_RS00705at 130.152 kb on - strand, within A4249_RS00705at 130.152 kb on - strand, within A4249_RS00705at 130.256 kb on + strandat 130.256 kb on + strandat 130.257 kb on - strandat 130.386 kb on + strand, within A4249_RS00710at 130.386 kb on + strand, within A4249_RS00710at 130.386 kb on + strand, within A4249_RS00710at 130.386 kb on + strand, within A4249_RS00710at 130.386 kb on + strand, within A4249_RS00710at 130.386 kb on + strand, within A4249_RS00710at 130.387 kb on - strand, within A4249_RS00710at 130.387 kb on - strand, within A4249_RS00710at 130.387 kb on - strand, within A4249_RS00710at 130.387 kb on - strand, within A4249_RS00710at 130.387 kb on - strand, within A4249_RS00710at 130.615 kb on + strandat 130.615 kb on + strandat 130.621 kb on + strandat 130.621 kb on + strandat 130.933 kb on + strand, within A4249_RS00715at 130.933 kb on + strand, within A4249_RS00715at 130.933 kb on + strand, within A4249_RS00715at 130.933 kb on + strand, within A4249_RS00715at 130.933 kb on + strand, within A4249_RS00715at 130.933 kb on + strand, within A4249_RS00715at 130.933 kb on + strand, within A4249_RS00715at 130.933 kb on + strand, within A4249_RS00715at 130.933 kb on + strand, within A4249_RS00715at 130.934 kb on - strand, within A4249_RS00715at 130.934 kb on - strand, within A4249_RS00715at 130.934 kb on - strand, within A4249_RS00715at 130.934 kb on - strand, within A4249_RS00715at 130.934 kb on - strand, within A4249_RS00715at 130.934 kb on - strand, within A4249_RS00715at 130.934 kb on - strand, within A4249_RS00715at 130.934 kb on - strand, within A4249_RS00715at 130.934 kb on - strand, within A4249_RS00715at 131.295 kb on - strand, within A4249_RS00715at 131.344 kb on + strand, within A4249_RS00715at 131.344 kb on + strand, within A4249_RS00715at 131.344 kb on + strand, within A4249_RS00715at 131.344 kb on + strand, within A4249_RS00715at 131.344 kb on + strand, within A4249_RS00715at 131.344 kb on + strand, within A4249_RS00715at 131.344 kb on + strand, within A4249_RS00715at 131.345 kb on - strand, within A4249_RS00715at 131.345 kb on - strand, within A4249_RS00715at 131.345 kb on - strand, within A4249_RS00715at 131.345 kb on - strand, within A4249_RS00715at 131.392 kb on + strand, within A4249_RS00715at 131.392 kb on + strand, within A4249_RS00715at 131.392 kb on + strand, within A4249_RS00715at 131.392 kb on + strand, within A4249_RS00715at 131.392 kb on + strand, within A4249_RS00715at 131.392 kb on + strand, within A4249_RS00715at 131.392 kb on + strand, within A4249_RS00715at 131.392 kb on + strand, within A4249_RS00715at 131.392 kb on + strand, within A4249_RS00715at 131.392 kb on + strand, within A4249_RS00715at 131.393 kb on - strand, within A4249_RS00715at 131.393 kb on - strand, within A4249_RS00715at 131.393 kb on - strand, within A4249_RS00715at 131.393 kb on - strand, within A4249_RS00715at 131.393 kb on - strand, within A4249_RS00715at 131.393 kb on - strand, within A4249_RS00715at 131.393 kb on - strand, within A4249_RS00715at 131.393 kb on - strand, within A4249_RS00715at 131.393 kb on - strand, within A4249_RS00715at 131.393 kb on - strand, within A4249_RS00715at 131.393 kb on - strand, within A4249_RS00715at 131.393 kb on - strand, within A4249_RS00715at 131.393 kb on - strand, within A4249_RS00715at 131.626 kb on + strand, within A4249_RS00715at 131.626 kb on + strand, within A4249_RS00715at 131.626 kb on + strand, within A4249_RS00715at 131.627 kb on - strand, within A4249_RS00715at 131.627 kb on - strand, within A4249_RS00715at 131.627 kb on - strand, within A4249_RS00715at 131.627 kb on - strand, within A4249_RS00715at 131.627 kb on - strand, within A4249_RS00715at 131.916 kb on + strandat 132.136 kb on + strand, within A4249_RS00720at 132.137 kb on - strand, within A4249_RS00720at 132.220 kb on - strandat 132.271 kb on + strandat 132.271 kb on + strandat 132.271 kb on + strandat 132.271 kb on + strandat 132.271 kb on + strandat 132.271 kb on + strandat 132.271 kb on + strandat 132.272 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C); 30C
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129,890 - A4249_RS00705 0.49 +2.4
129,890 - A4249_RS00705 0.49 +0.4
129,890 - A4249_RS00705 0.49 -0.2
129,929 + A4249_RS00705 0.55 -0.0
129,929 + A4249_RS00705 0.55 +1.4
129,929 + A4249_RS00705 0.55 +2.3
129,929 + A4249_RS00705 0.55 +0.2
129,929 + A4249_RS00705 0.55 +1.1
129,930 - A4249_RS00705 0.55 -1.6
129,930 - A4249_RS00705 0.55 -1.4
129,930 - A4249_RS00705 0.55 -0.0
129,930 - A4249_RS00705 0.55 -0.6
129,930 - A4249_RS00705 0.55 +3.0
129,930 - A4249_RS00705 0.55 -1.9
129,941 + A4249_RS00705 0.57 -1.9
129,941 + A4249_RS00705 0.57 -0.3
129,941 + A4249_RS00705 0.57 -0.2
129,942 - A4249_RS00705 0.57 +2.2
129,942 - A4249_RS00705 0.57 -2.2
129,998 + A4249_RS00705 0.65 +0.4
129,998 + A4249_RS00705 0.65 -0.1
129,998 + A4249_RS00705 0.65 -1.9
129,998 + A4249_RS00705 0.65 +1.4
129,998 + A4249_RS00705 0.65 +0.4
129,998 + A4249_RS00705 0.65 +0.7
129,998 + A4249_RS00705 0.65 -0.4
129,998 + A4249_RS00705 0.65 -0.3
129,998 + A4249_RS00705 0.65 +0.1
129,998 + A4249_RS00705 0.65 +0.4
129,998 + A4249_RS00705 0.65 +0.1
129,998 + A4249_RS00705 0.65 +0.0
129,998 + A4249_RS00705 0.65 +1.4
129,998 + A4249_RS00705 0.65 +0.6
129,998 + A4249_RS00705 0.65 +0.6
129,998 + A4249_RS00705 0.65 -0.1
129,998 + A4249_RS00705 0.65 -0.2
129,999 - A4249_RS00705 0.66 -0.5
129,999 - A4249_RS00705 0.66 +1.5
129,999 - A4249_RS00705 0.66 -0.1
129,999 - A4249_RS00705 0.66 +1.4
129,999 - A4249_RS00705 0.66 +0.9
129,999 - A4249_RS00705 0.66 -1.2
129,999 - A4249_RS00705 0.66 +0.7
129,999 - A4249_RS00705 0.66 +2.7
129,999 - A4249_RS00705 0.66 -0.6
129,999 - A4249_RS00705 0.66 -1.2
129,999 - A4249_RS00705 0.66 -0.4
129,999 - A4249_RS00705 0.66 -0.4
129,999 - A4249_RS00705 0.66 -0.6
129,999 - A4249_RS00705 0.66 -0.5
129,999 - A4249_RS00705 0.66 -0.4
130,002 + A4249_RS00705 0.66 +3.2
130,002 + A4249_RS00705 0.66 +0.1
130,002 + A4249_RS00705 0.66 -1.3
130,003 - A4249_RS00705 0.66 +0.4
130,013 + A4249_RS00705 0.68 -0.9
130,013 + A4249_RS00705 0.68 +0.6
130,014 - A4249_RS00705 0.68 -1.6
130,014 - A4249_RS00705 0.68 -0.3
130,014 - A4249_RS00705 0.68 +2.4
130,014 - A4249_RS00705 0.68 +0.2
130,014 - A4249_RS00705 0.68 +0.7
130,136 + A4249_RS00705 0.86 -0.7
130,151 + A4249_RS00705 0.88 +0.6
130,151 + A4249_RS00705 0.88 -1.6
130,152 - A4249_RS00705 0.89 -1.2
130,152 - A4249_RS00705 0.89 +0.5
130,152 - A4249_RS00705 0.89 +2.3
130,152 - A4249_RS00705 0.89 +0.4
130,152 - A4249_RS00705 0.89 +0.2
130,152 - A4249_RS00705 0.89 +0.4
130,256 + +0.7
130,256 + -1.2
130,257 - +0.2
130,386 + A4249_RS00710 0.44 -1.0
130,386 + A4249_RS00710 0.44 -0.8
130,386 + A4249_RS00710 0.44 -0.6
130,386 + A4249_RS00710 0.44 -0.1
130,386 + A4249_RS00710 0.44 -1.6
130,386 + A4249_RS00710 0.44 -0.6
130,387 - A4249_RS00710 0.44 +2.0
130,387 - A4249_RS00710 0.44 -1.2
130,387 - A4249_RS00710 0.44 -2.6
130,387 - A4249_RS00710 0.44 -0.9
130,387 - A4249_RS00710 0.44 +0.6
130,615 + +1.1
130,615 + -0.9
130,621 + +2.1
130,621 + +1.1
130,933 + A4249_RS00715 0.24 +2.4
130,933 + A4249_RS00715 0.24 +2.6
130,933 + A4249_RS00715 0.24 +2.5
130,933 + A4249_RS00715 0.24 +2.5
130,933 + A4249_RS00715 0.24 +2.7
130,933 + A4249_RS00715 0.24 +2.5
130,933 + A4249_RS00715 0.24 +2.0
130,933 + A4249_RS00715 0.24 +1.4
130,933 + A4249_RS00715 0.24 +2.5
130,934 - A4249_RS00715 0.24 +2.1
130,934 - A4249_RS00715 0.24 +1.5
130,934 - A4249_RS00715 0.24 +0.6
130,934 - A4249_RS00715 0.24 +2.6
130,934 - A4249_RS00715 0.24 +1.5
130,934 - A4249_RS00715 0.24 +1.6
130,934 - A4249_RS00715 0.24 +2.2
130,934 - A4249_RS00715 0.24 +3.1
130,934 - A4249_RS00715 0.24 +1.6
131,295 - A4249_RS00715 0.51 +0.9
131,344 + A4249_RS00715 0.55 +3.7
131,344 + A4249_RS00715 0.55 +1.3
131,344 + A4249_RS00715 0.55 +3.6
131,344 + A4249_RS00715 0.55 +1.9
131,344 + A4249_RS00715 0.55 +2.8
131,344 + A4249_RS00715 0.55 +2.8
131,344 + A4249_RS00715 0.55 +3.2
131,345 - A4249_RS00715 0.55 +1.9
131,345 - A4249_RS00715 0.55 +2.3
131,345 - A4249_RS00715 0.55 +0.7
131,345 - A4249_RS00715 0.55 +2.6
131,392 + A4249_RS00715 0.59 +2.0
131,392 + A4249_RS00715 0.59 +2.3
131,392 + A4249_RS00715 0.59 +2.3
131,392 + A4249_RS00715 0.59 +2.0
131,392 + A4249_RS00715 0.59 +2.2
131,392 + A4249_RS00715 0.59 +4.7
131,392 + A4249_RS00715 0.59 +2.3
131,392 + A4249_RS00715 0.59 +1.7
131,392 + A4249_RS00715 0.59 +3.3
131,392 + A4249_RS00715 0.59 +0.9
131,393 - A4249_RS00715 0.59 +2.7
131,393 - A4249_RS00715 0.59 +2.5
131,393 - A4249_RS00715 0.59 +2.9
131,393 - A4249_RS00715 0.59 +1.3
131,393 - A4249_RS00715 0.59 +3.1
131,393 - A4249_RS00715 0.59 +3.1
131,393 - A4249_RS00715 0.59 +2.3
131,393 - A4249_RS00715 0.59 +2.2
131,393 - A4249_RS00715 0.59 +1.9
131,393 - A4249_RS00715 0.59 +2.7
131,393 - A4249_RS00715 0.59 +2.0
131,393 - A4249_RS00715 0.59 +1.1
131,393 - A4249_RS00715 0.59 +3.3
131,626 + A4249_RS00715 0.77 +2.1
131,626 + A4249_RS00715 0.77 +1.4
131,626 + A4249_RS00715 0.77 +3.7
131,627 - A4249_RS00715 0.77 +1.6
131,627 - A4249_RS00715 0.77 +2.3
131,627 - A4249_RS00715 0.77 +1.8
131,627 - A4249_RS00715 0.77 +3.0
131,627 - A4249_RS00715 0.77 +2.1
131,916 + +0.5
132,136 + A4249_RS00720 0.79 -1.9
132,137 - A4249_RS00720 0.80 +0.5
132,220 - +1.0
132,271 + +0.7
132,271 + +0.5
132,271 + +0.4
132,271 + -1.9
132,271 + -1.2
132,271 + -1.6
132,271 + -0.3
132,272 - -0.9

Or see this region's nucleotide sequence