Experiment: D-Glucose (C); 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS00260 and A4249_RS00265 are separated by 129 nucleotides A4249_RS00265 and A4249_RS00270 are separated by 90 nucleotides A4249_RS00270 and A4249_RS00275 overlap by 25 nucleotides
A4249_RS00260: A4249_RS00260 - YqgE/AlgH family protein, at 44,853 to 45,422
_RS00260
A4249_RS00265: A4249_RS00265 - peroxiredoxin, at 45,552 to 46,037
_RS00265
A4249_RS00270: A4249_RS00270 - very short patch repair endonuclease, at 46,128 to 46,517
_RS00270
A4249_RS00275: A4249_RS00275 - ATP-binding protein, at 46,493 to 48,364
_RS00275
Position (kb) 46
47 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 45.161 kb on + strand, within A4249_RS00260 at 45.162 kb on - strand, within A4249_RS00260 at 45.496 kb on + strand at 45.496 kb on + strand at 45.496 kb on + strand at 45.496 kb on + strand at 45.496 kb on + strand at 45.496 kb on + strand at 45.496 kb on + strand at 45.496 kb on + strand at 45.496 kb on + strand at 45.496 kb on + strand at 45.496 kb on + strand at 45.496 kb on + strand at 45.496 kb on + strand at 45.496 kb on + strand at 45.496 kb on + strand at 45.496 kb on + strand at 45.496 kb on + strand at 45.496 kb on + strand at 45.497 kb on - strand at 45.497 kb on - strand at 45.497 kb on - strand at 45.497 kb on - strand at 45.497 kb on - strand at 45.497 kb on - strand at 45.497 kb on - strand at 45.497 kb on - strand at 45.497 kb on - strand at 45.497 kb on - strand at 45.497 kb on - strand at 45.497 kb on - strand at 45.497 kb on - strand at 45.497 kb on - strand at 45.497 kb on - strand at 45.497 kb on - strand at 45.762 kb on - strand, within A4249_RS00265 at 45.937 kb on - strand, within A4249_RS00265 at 46.035 kb on + strand at 46.035 kb on + strand at 46.035 kb on + strand at 46.036 kb on - strand at 46.036 kb on - strand at 46.036 kb on - strand at 46.036 kb on - strand at 46.036 kb on - strand at 46.066 kb on + strand at 46.067 kb on - strand at 46.067 kb on - strand at 46.426 kb on + strand, within A4249_RS00270 at 46.426 kb on + strand, within A4249_RS00270 at 46.427 kb on - strand, within A4249_RS00270 at 46.590 kb on + strand at 46.590 kb on + strand at 46.590 kb on + strand at 46.590 kb on + strand at 46.590 kb on + strand at 46.590 kb on + strand at 46.591 kb on - strand at 46.859 kb on - strand, within A4249_RS00275 at 46.859 kb on - strand, within A4249_RS00275 at 46.859 kb on - strand, within A4249_RS00275 at 47.286 kb on + strand, within A4249_RS00275
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 30C remove 45,161 + A4249_RS00260 0.54 +0.1 45,162 - A4249_RS00260 0.54 -0.1 45,496 + -1.2 45,496 + -1.9 45,496 + +1.0 45,496 + -0.9 45,496 + -0.1 45,496 + -1.8 45,496 + -0.6 45,496 + -0.5 45,496 + +0.2 45,496 + +0.8 45,496 + +0.4 45,496 + +1.0 45,496 + -1.7 45,496 + -2.6 45,496 + +1.2 45,496 + -0.0 45,496 + +1.0 45,496 + -0.6 45,497 - -0.3 45,497 - +1.1 45,497 - +2.4 45,497 - -2.3 45,497 - -0.0 45,497 - -0.6 45,497 - -0.1 45,497 - +0.5 45,497 - -0.6 45,497 - +0.5 45,497 - -0.8 45,497 - -0.1 45,497 - -1.1 45,497 - -1.4 45,497 - -1.3 45,497 - +0.4 45,762 - A4249_RS00265 0.43 -0.6 45,937 - A4249_RS00265 0.79 -1.3 46,035 + -1.1 46,035 + -1.0 46,035 + -0.5 46,036 - +0.4 46,036 - +1.5 46,036 - -0.5 46,036 - -0.3 46,036 - -0.1 46,066 + -1.1 46,067 - +0.6 46,067 - -0.0 46,426 + A4249_RS00270 0.76 -0.1 46,426 + A4249_RS00270 0.76 -2.9 46,427 - A4249_RS00270 0.77 -0.1 46,590 + -0.7 46,590 + -0.6 46,590 + +0.4 46,590 + -1.3 46,590 + +0.8 46,590 + -1.5 46,591 - -1.4 46,859 - A4249_RS00275 0.20 +1.1 46,859 - A4249_RS00275 0.20 -0.1 46,859 - A4249_RS00275 0.20 -0.8 47,286 + A4249_RS00275 0.42 -0.2
Or see this region's nucleotide sequence