Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_13755

Experiment: R2A_PIPES with Aluminum chloride 0.28125 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntpurD and OKGIIK_13755 are separated by 89 nucleotidesOKGIIK_13755 and OKGIIK_13760 are separated by 135 nucleotidesOKGIIK_13760 and topA are separated by 0 nucleotides OKGIIK_13750: purD - phosphoribosylamine--glycine ligase, at 2,986,821 to 2,988,104 purD OKGIIK_13755: OKGIIK_13755 - AMP-ligase, at 2,988,194 to 2,989,567 _13755 OKGIIK_13760: OKGIIK_13760 - Threonylcarbamoyl-AMP synthase, at 2,989,703 to 2,990,275 _13760 OKGIIK_13765: topA - DNA topoisomerase I, at 2,990,276 to 2,992,759 topA Position (kb) 2988 2989 2990Strain fitness (log2 ratio) -2 -1 0 1 2at 2987.407 kb on + strand, within purDat 2987.407 kb on + strand, within purDat 2987.515 kb on + strand, within purDat 2987.515 kb on + strand, within purDat 2987.515 kb on + strand, within purDat 2987.516 kb on - strand, within purDat 2987.516 kb on - strand, within purDat 2987.516 kb on - strand, within purDat 2987.516 kb on - strand, within purDat 2987.516 kb on - strand, within purDat 2987.704 kb on + strand, within purDat 2987.704 kb on + strand, within purDat 2987.705 kb on - strand, within purDat 2988.155 kb on + strandat 2988.155 kb on + strandat 2988.155 kb on + strandat 2988.155 kb on + strandat 2988.156 kb on - strandat 2988.156 kb on - strandat 2988.156 kb on - strandat 2988.156 kb on - strandat 2988.156 kb on - strandat 2988.639 kb on + strand, within OKGIIK_13755at 2988.639 kb on + strand, within OKGIIK_13755at 2988.639 kb on + strand, within OKGIIK_13755at 2988.639 kb on + strand, within OKGIIK_13755at 2988.639 kb on + strand, within OKGIIK_13755at 2988.639 kb on + strand, within OKGIIK_13755at 2988.639 kb on + strand, within OKGIIK_13755at 2988.639 kb on + strand, within OKGIIK_13755at 2988.639 kb on + strand, within OKGIIK_13755at 2988.639 kb on + strand, within OKGIIK_13755at 2988.639 kb on + strand, within OKGIIK_13755at 2988.640 kb on - strand, within OKGIIK_13755at 2988.640 kb on - strand, within OKGIIK_13755at 2988.640 kb on - strand, within OKGIIK_13755at 2988.640 kb on - strand, within OKGIIK_13755at 2988.640 kb on - strand, within OKGIIK_13755at 2988.640 kb on - strand, within OKGIIK_13755at 2988.640 kb on - strand, within OKGIIK_13755at 2988.932 kb on + strand, within OKGIIK_13755at 2988.933 kb on - strand, within OKGIIK_13755at 2988.933 kb on - strand, within OKGIIK_13755at 2988.975 kb on + strand, within OKGIIK_13755at 2988.975 kb on + strand, within OKGIIK_13755at 2988.975 kb on + strand, within OKGIIK_13755at 2988.975 kb on + strand, within OKGIIK_13755at 2988.975 kb on + strand, within OKGIIK_13755at 2988.975 kb on + strand, within OKGIIK_13755at 2988.975 kb on + strand, within OKGIIK_13755at 2988.975 kb on + strand, within OKGIIK_13755at 2988.975 kb on + strand, within OKGIIK_13755at 2988.975 kb on + strand, within OKGIIK_13755at 2988.975 kb on + strand, within OKGIIK_13755at 2988.975 kb on + strand, within OKGIIK_13755at 2988.975 kb on + strand, within OKGIIK_13755at 2988.975 kb on + strand, within OKGIIK_13755at 2988.975 kb on + strand, within OKGIIK_13755at 2988.975 kb on + strand, within OKGIIK_13755at 2988.975 kb on + strand, within OKGIIK_13755at 2988.975 kb on + strand, within OKGIIK_13755at 2988.975 kb on + strand, within OKGIIK_13755at 2988.975 kb on + strand, within OKGIIK_13755at 2988.975 kb on + strand, within OKGIIK_13755at 2988.975 kb on + strand, within OKGIIK_13755at 2988.975 kb on + strand, within OKGIIK_13755at 2988.975 kb on + strand, within OKGIIK_13755at 2988.975 kb on + strand, within OKGIIK_13755at 2988.975 kb on + strand, within OKGIIK_13755at 2988.975 kb on + strand, within OKGIIK_13755at 2988.975 kb on + strand, within OKGIIK_13755at 2988.975 kb on + strand, within OKGIIK_13755at 2988.975 kb on + strand, within OKGIIK_13755at 2988.975 kb on + strand, within OKGIIK_13755at 2988.975 kb on + strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2988.976 kb on - strand, within OKGIIK_13755at 2989.102 kb on + strand, within OKGIIK_13755at 2989.102 kb on + strand, within OKGIIK_13755at 2989.122 kb on + strand, within OKGIIK_13755at 2989.122 kb on + strand, within OKGIIK_13755at 2989.122 kb on + strand, within OKGIIK_13755at 2989.122 kb on + strand, within OKGIIK_13755at 2989.122 kb on + strand, within OKGIIK_13755at 2989.122 kb on + strand, within OKGIIK_13755at 2989.122 kb on + strand, within OKGIIK_13755at 2989.122 kb on + strand, within OKGIIK_13755at 2989.122 kb on + strand, within OKGIIK_13755at 2989.122 kb on + strand, within OKGIIK_13755at 2989.122 kb on + strand, within OKGIIK_13755at 2989.122 kb on + strand, within OKGIIK_13755at 2989.122 kb on + strand, within OKGIIK_13755at 2989.122 kb on + strand, within OKGIIK_13755at 2989.123 kb on - strand, within OKGIIK_13755at 2989.123 kb on - strand, within OKGIIK_13755at 2989.123 kb on - strand, within OKGIIK_13755at 2989.123 kb on - strand, within OKGIIK_13755at 2989.123 kb on - strand, within OKGIIK_13755at 2989.123 kb on - strand, within OKGIIK_13755at 2989.123 kb on - strand, within OKGIIK_13755at 2989.257 kb on + strand, within OKGIIK_13755at 2989.257 kb on + strand, within OKGIIK_13755at 2989.258 kb on - strand, within OKGIIK_13755at 2989.258 kb on - strand, within OKGIIK_13755at 2989.258 kb on - strand, within OKGIIK_13755at 2989.258 kb on - strand, within OKGIIK_13755at 2989.371 kb on + strand, within OKGIIK_13755at 2989.371 kb on + strand, within OKGIIK_13755at 2989.545 kb on + strandat 2989.545 kb on + strandat 2989.545 kb on + strandat 2989.545 kb on + strandat 2989.545 kb on + strandat 2989.545 kb on + strandat 2989.545 kb on + strandat 2989.545 kb on + strandat 2989.545 kb on + strandat 2989.545 kb on + strandat 2989.545 kb on + strandat 2989.545 kb on + strandat 2989.545 kb on + strandat 2989.545 kb on + strandat 2989.545 kb on + strandat 2989.546 kb on - strandat 2989.546 kb on - strandat 2989.546 kb on - strandat 2989.546 kb on - strandat 2989.546 kb on - strandat 2989.546 kb on - strandat 2989.546 kb on - strandat 2989.546 kb on - strandat 2989.546 kb on - strandat 2989.546 kb on - strandat 2989.546 kb on - strandat 2989.546 kb on - strandat 2989.546 kb on - strandat 2989.546 kb on - strandat 2989.546 kb on - strandat 2989.546 kb on - strandat 2989.546 kb on - strandat 2989.546 kb on - strandat 2989.546 kb on - strandat 2989.546 kb on - strandat 2989.546 kb on - strandat 2989.546 kb on - strandat 2989.546 kb on - strandat 2989.554 kb on + strandat 2989.555 kb on - strandat 2989.555 kb on - strandat 2989.618 kb on + strandat 2989.618 kb on + strandat 2989.618 kb on + strandat 2989.618 kb on + strandat 2989.618 kb on + strandat 2989.618 kb on + strandat 2989.618 kb on + strandat 2989.619 kb on - strandat 2989.619 kb on - strandat 2989.619 kb on - strandat 2989.619 kb on - strandat 2989.619 kb on - strandat 2989.619 kb on - strandat 2989.619 kb on - strandat 2989.657 kb on + strandat 2989.657 kb on + strandat 2989.657 kb on + strandat 2989.657 kb on + strandat 2989.657 kb on + strandat 2989.657 kb on + strandat 2989.658 kb on - strandat 2989.658 kb on - strandat 2989.658 kb on - strandat 2989.658 kb on - strandat 2989.658 kb on - strandat 2989.658 kb on - strandat 2989.658 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A_PIPES with Aluminum chloride 0.28125 mM
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2,987,407 + purD OKGIIK_13750 0.46 -0.8
2,987,407 + purD OKGIIK_13750 0.46 -1.6
2,987,515 + purD OKGIIK_13750 0.54 -0.6
2,987,515 + purD OKGIIK_13750 0.54 -2.1
2,987,515 + purD OKGIIK_13750 0.54 -0.6
2,987,516 - purD OKGIIK_13750 0.54 -2.3
2,987,516 - purD OKGIIK_13750 0.54 +0.4
2,987,516 - purD OKGIIK_13750 0.54 -0.6
2,987,516 - purD OKGIIK_13750 0.54 +0.6
2,987,516 - purD OKGIIK_13750 0.54 -1.2
2,987,704 + purD OKGIIK_13750 0.69 -0.6
2,987,704 + purD OKGIIK_13750 0.69 -1.2
2,987,705 - purD OKGIIK_13750 0.69 -1.2
2,988,155 + -0.6
2,988,155 + -0.6
2,988,155 + -1.7
2,988,155 + +0.4
2,988,156 - -1.6
2,988,156 - -1.4
2,988,156 - +0.7
2,988,156 - -1.9
2,988,156 - -0.6
2,988,639 + OKGIIK_13755 0.32 -1.0
2,988,639 + OKGIIK_13755 0.32 +0.6
2,988,639 + OKGIIK_13755 0.32 -0.9
2,988,639 + OKGIIK_13755 0.32 -2.1
2,988,639 + OKGIIK_13755 0.32 -0.6
2,988,639 + OKGIIK_13755 0.32 +0.3
2,988,639 + OKGIIK_13755 0.32 +0.6
2,988,639 + OKGIIK_13755 0.32 -0.9
2,988,639 + OKGIIK_13755 0.32 -1.2
2,988,639 + OKGIIK_13755 0.32 +0.2
2,988,639 + OKGIIK_13755 0.32 -1.4
2,988,640 - OKGIIK_13755 0.32 +1.4
2,988,640 - OKGIIK_13755 0.32 +0.2
2,988,640 - OKGIIK_13755 0.32 +0.4
2,988,640 - OKGIIK_13755 0.32 -0.5
2,988,640 - OKGIIK_13755 0.32 -0.6
2,988,640 - OKGIIK_13755 0.32 +1.2
2,988,640 - OKGIIK_13755 0.32 -0.6
2,988,932 + OKGIIK_13755 0.54 +0.6
2,988,933 - OKGIIK_13755 0.54 -0.1
2,988,933 - OKGIIK_13755 0.54 -0.2
2,988,975 + OKGIIK_13755 0.57 -0.6
2,988,975 + OKGIIK_13755 0.57 +0.6
2,988,975 + OKGIIK_13755 0.57 +2.2
2,988,975 + OKGIIK_13755 0.57 +0.7
2,988,975 + OKGIIK_13755 0.57 -0.9
2,988,975 + OKGIIK_13755 0.57 +1.0
2,988,975 + OKGIIK_13755 0.57 -0.6
2,988,975 + OKGIIK_13755 0.57 -0.4
2,988,975 + OKGIIK_13755 0.57 -0.9
2,988,975 + OKGIIK_13755 0.57 +0.1
2,988,975 + OKGIIK_13755 0.57 -0.2
2,988,975 + OKGIIK_13755 0.57 +1.4
2,988,975 + OKGIIK_13755 0.57 -1.5
2,988,975 + OKGIIK_13755 0.57 -0.9
2,988,975 + OKGIIK_13755 0.57 -1.6
2,988,975 + OKGIIK_13755 0.57 -1.2
2,988,975 + OKGIIK_13755 0.57 -0.3
2,988,975 + OKGIIK_13755 0.57 -0.3
2,988,975 + OKGIIK_13755 0.57 -1.6
2,988,975 + OKGIIK_13755 0.57 -2.1
2,988,975 + OKGIIK_13755 0.57 +0.4
2,988,975 + OKGIIK_13755 0.57 -0.9
2,988,975 + OKGIIK_13755 0.57 +0.4
2,988,975 + OKGIIK_13755 0.57 -1.2
2,988,975 + OKGIIK_13755 0.57 -0.8
2,988,975 + OKGIIK_13755 0.57 -0.9
2,988,975 + OKGIIK_13755 0.57 -0.4
2,988,975 + OKGIIK_13755 0.57 -0.6
2,988,975 + OKGIIK_13755 0.57 +0.5
2,988,975 + OKGIIK_13755 0.57 -0.8
2,988,975 + OKGIIK_13755 0.57 -1.8
2,988,975 + OKGIIK_13755 0.57 -0.2
2,988,976 - OKGIIK_13755 0.57 -0.6
2,988,976 - OKGIIK_13755 0.57 -0.3
2,988,976 - OKGIIK_13755 0.57 -0.5
2,988,976 - OKGIIK_13755 0.57 -1.2
2,988,976 - OKGIIK_13755 0.57 +0.1
2,988,976 - OKGIIK_13755 0.57 -0.9
2,988,976 - OKGIIK_13755 0.57 -1.9
2,988,976 - OKGIIK_13755 0.57 -0.9
2,988,976 - OKGIIK_13755 0.57 -1.9
2,988,976 - OKGIIK_13755 0.57 +0.1
2,988,976 - OKGIIK_13755 0.57 +0.7
2,988,976 - OKGIIK_13755 0.57 -1.4
2,988,976 - OKGIIK_13755 0.57 +0.7
2,988,976 - OKGIIK_13755 0.57 -1.2
2,988,976 - OKGIIK_13755 0.57 -0.2
2,988,976 - OKGIIK_13755 0.57 +1.0
2,988,976 - OKGIIK_13755 0.57 +0.6
2,988,976 - OKGIIK_13755 0.57 -0.2
2,988,976 - OKGIIK_13755 0.57 -0.9
2,988,976 - OKGIIK_13755 0.57 +1.0
2,988,976 - OKGIIK_13755 0.57 -0.3
2,988,976 - OKGIIK_13755 0.57 +1.7
2,988,976 - OKGIIK_13755 0.57 -0.9
2,988,976 - OKGIIK_13755 0.57 -0.6
2,988,976 - OKGIIK_13755 0.57 +0.6
2,988,976 - OKGIIK_13755 0.57 +0.2
2,988,976 - OKGIIK_13755 0.57 -0.5
2,988,976 - OKGIIK_13755 0.57 +0.6
2,988,976 - OKGIIK_13755 0.57 -2.1
2,988,976 - OKGIIK_13755 0.57 +1.1
2,988,976 - OKGIIK_13755 0.57 -0.6
2,988,976 - OKGIIK_13755 0.57 -0.6
2,988,976 - OKGIIK_13755 0.57 +0.7
2,988,976 - OKGIIK_13755 0.57 -0.6
2,988,976 - OKGIIK_13755 0.57 +1.6
2,988,976 - OKGIIK_13755 0.57 +0.1
2,988,976 - OKGIIK_13755 0.57 +1.2
2,988,976 - OKGIIK_13755 0.57 -0.2
2,988,976 - OKGIIK_13755 0.57 +0.1
2,989,102 + OKGIIK_13755 0.66 -0.6
2,989,102 + OKGIIK_13755 0.66 -1.2
2,989,122 + OKGIIK_13755 0.68 -0.6
2,989,122 + OKGIIK_13755 0.68 +0.2
2,989,122 + OKGIIK_13755 0.68 -0.2
2,989,122 + OKGIIK_13755 0.68 -1.1
2,989,122 + OKGIIK_13755 0.68 -2.5
2,989,122 + OKGIIK_13755 0.68 +1.2
2,989,122 + OKGIIK_13755 0.68 +1.0
2,989,122 + OKGIIK_13755 0.68 -1.1
2,989,122 + OKGIIK_13755 0.68 +2.1
2,989,122 + OKGIIK_13755 0.68 -0.6
2,989,122 + OKGIIK_13755 0.68 -0.7
2,989,122 + OKGIIK_13755 0.68 -1.6
2,989,122 + OKGIIK_13755 0.68 -0.1
2,989,122 + OKGIIK_13755 0.68 -0.3
2,989,123 - OKGIIK_13755 0.68 -1.6
2,989,123 - OKGIIK_13755 0.68 -0.9
2,989,123 - OKGIIK_13755 0.68 -0.0
2,989,123 - OKGIIK_13755 0.68 -1.1
2,989,123 - OKGIIK_13755 0.68 -1.6
2,989,123 - OKGIIK_13755 0.68 -1.2
2,989,123 - OKGIIK_13755 0.68 +0.0
2,989,257 + OKGIIK_13755 0.77 +2.2
2,989,257 + OKGIIK_13755 0.77 -0.9
2,989,258 - OKGIIK_13755 0.77 -0.6
2,989,258 - OKGIIK_13755 0.77 -0.1
2,989,258 - OKGIIK_13755 0.77 +0.6
2,989,258 - OKGIIK_13755 0.77 -0.6
2,989,371 + OKGIIK_13755 0.86 +1.1
2,989,371 + OKGIIK_13755 0.86 +0.1
2,989,545 + -2.3
2,989,545 + +0.4
2,989,545 + -0.6
2,989,545 + -0.6
2,989,545 + -0.3
2,989,545 + -1.0
2,989,545 + -1.2
2,989,545 + -0.9
2,989,545 + -0.9
2,989,545 + -0.9
2,989,545 + -1.3
2,989,545 + -1.4
2,989,545 + -0.2
2,989,545 + +0.6
2,989,545 + -1.6
2,989,546 - -1.6
2,989,546 - -2.1
2,989,546 - -1.1
2,989,546 - -0.6
2,989,546 - +0.5
2,989,546 - -0.7
2,989,546 - -1.4
2,989,546 - +1.1
2,989,546 - -0.6
2,989,546 - -0.6
2,989,546 - -1.2
2,989,546 - -1.2
2,989,546 - -0.8
2,989,546 - +0.4
2,989,546 - -0.6
2,989,546 - -0.9
2,989,546 - +0.2
2,989,546 - -0.2
2,989,546 - -1.9
2,989,546 - -1.5
2,989,546 - -0.8
2,989,546 - -1.3
2,989,546 - -0.6
2,989,554 + -2.1
2,989,555 - -0.2
2,989,555 - -0.2
2,989,618 + -1.1
2,989,618 + -0.9
2,989,618 + -1.2
2,989,618 + +0.6
2,989,618 + -0.2
2,989,618 + -1.2
2,989,618 + +0.4
2,989,619 - +0.2
2,989,619 - +0.6
2,989,619 - -2.1
2,989,619 - +1.5
2,989,619 - -0.6
2,989,619 - -0.4
2,989,619 - +0.4
2,989,657 + +0.4
2,989,657 + -1.7
2,989,657 + -0.6
2,989,657 + -1.0
2,989,657 + -0.8
2,989,657 + +0.2
2,989,658 - -1.2
2,989,658 - -0.4
2,989,658 - -0.6
2,989,658 - -0.9
2,989,658 - -1.9
2,989,658 - +1.7
2,989,658 - +0.2

Or see this region's nucleotide sequence